RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 GAS8-AS1O95177 125 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 PPBPP02775 128 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 ESDP10768 282 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 FABP4P15090 132 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 GATA1P15976 413 aaPredicted RBP5.56□□□□□ -1.52
SMC6-209ENST00000489535 AKR1D1P51857 326 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 ZNF56Q15929 161 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 RRN3P1Q2M238 152 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 FAM74A4Q5TZK3 123 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 RNASEKQ6P5S7 137 aaKnown RBP5.56□□□□□ -1.52
SMC6-209ENST00000489535 NIT1Q86X76 327 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 KIR2DL5AQ8N109 375 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 KIR2DL5BQ8NHK3 375 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 PTH2Q96A98 100 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 LAMTOR2Q9Y2Q5 125 aa5.56□□□□□ -1.52
SMC6-209ENST00000489535 IFITM10A6NMD0 228 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 A8MWV9 139 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 F5H697 171 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 TNFRSF6BO95407 300 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 CRYGDP07320 174 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 PMCHP20382 165 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 LINC00315P59091 139 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 DEFB135Q30KP9 77 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 SUMO4Q6EEV6 95 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 LURAP1LQ8IV03 231 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 POM121L12Q8N7R1 296 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 PRSS3P2Q8NHM4 247 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 TMEM18Q96B42 140 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 URB1-AS1Q96HZ7 61 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 SAMD10Q9BYL1 202 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 MAP1LC3AQ9H492 121 aa5.55□□□□□ -1.52
SMC6-209ENST00000489535 TRGV1A0A0A0MS02 117 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 PLAC8L1A1L4L8 177 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 SMIM9A6NGZ8 99 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 HSBP1O75506 76 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 LINC00614P0C842 121 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 IFI27P40305 119 aaPredicted RBP5.54□□□□□ -1.52
SMC6-209ENST00000489535 PIK3CD-AS1Q5SR53 167 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 FA2HQ7L5A8 372 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 NRACQ8N912 160 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 OR10D4PQ8NGN7 298 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 RASL10AQ92737 203 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 CHCHD1Q96BP2 118 aaKnown RBP5.54□□□□□ -1.52
SMC6-209ENST00000489535 RPL39LQ96EH5 51 aaKnown RBP5.54□□□□□ -1.52
SMC6-209ENST00000489535 HIST1H2BLQ99880 126 aa5.54□□□□□ -1.52
SMC6-209ENST00000489535 NOP10Q9NPE3 64 aaKnown RBP5.54□□□□□ -1.52
SMC6-209ENST00000489535 IGHV3-73A0A0B4J1V6 119 aa5.53□□□□□ -1.52
SMC6-209ENST00000489535 A8MZ25 164 aa5.53□□□□□ -1.52
SMC6-209ENST00000489535 RS1O15537 224 aa5.53□□□□□ -1.52
SMC6-209ENST00000489535 AMTP48728 403 aa5.53□□□□□ -1.52
SMC6-209ENST00000489535 DAZ2Q13117 558 aaKnown RBP5.53□□□□□ -1.52
SMC6-209ENST00000489535 CFAP126Q5VTH2 177 aa5.53□□□□□ -1.52
SMC6-209ENST00000489535 Q6ZTI0 123 aa5.53□□□□□ -1.52
SMC6-209ENST00000489535 FAM19A2Q8N3H0 131 aa5.53□□□□□ -1.52
SMC6-209ENST00000489535 PACRGQ96M98 296 aaPredicted RBP5.53□□□□□ -1.52
SMC6-209ENST00000489535 NDUFAF3Q9BU61 184 aa5.53□□□□□ -1.52
SMC6-209ENST00000489535 PKD1L1Q8TDX9 2849 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 COL6A5A8TX70 2615 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 PRSS47A8MTI9 375 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 RHODO00212 210 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 PPP1R17O96001 155 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 EMP1P54849 157 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 PMCHL1Q16048 86 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 LGALS9BQ3B8N2 356 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 UFSP1Q6NVU6 142 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 Q8N8P6 123 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 OR4C5Q8NGB2 326 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 OR11H2Q8NH07 326 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 RNF183Q96D59 192 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 OVOL2Q9BRP0 275 aa5.52□□□□□ -1.53
SMC6-209ENST00000489535 NXT2Q9NPJ8 142 aaKnown RBP5.52□□□□□ -1.53
SMC6-209ENST00000489535 TRAV4A0A0B4J268 109 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 IGHV1-24A0A0C4DH33 117 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 H7C1H1 209 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 GAGE7O76087 117 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 IGHV3-53P01767 116 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 GAGE12FP0CL80 117 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 GAGE12GP0CL81 117 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 GAGE12IP0CL82 117 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 SUMO2P61956 95 aaKnown RBP5.51□□□□□ -1.53
SMC6-209ENST00000489535 Q6ZWC4 215 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 ZNF479Q96JC4 524 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 C20orf78Q9BR46 151 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 SMIM2Q9BVW6 85 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 ST20Q9HBF5 79 aa5.51□□□□□ -1.53
SMC6-209ENST00000489535 IGLV2-18A0A075B6J9 118 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 TRGV2A0A075B6R0 118 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 IGHV4-28A0A0C4DH34 117 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 M0QY20 66 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 TCAPO15273 167 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 MIFP14174 115 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 RIPPLY3P57055 190 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 ZFP2Q6ZN57 461 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 EDA2RQ9HAV5 297 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 NIT2Q9NQR4 276 aa5.5□□□□□ -1.53
SMC6-209ENST00000489535 TRBV6-5A0A0K0K1A5 114 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 SDHAF1A6NFY7 115 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 LINC01546A6NGU7 62 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 DEFB4AO15263 64 aa5.49□□□□□ -1.53
SMC6-209ENST00000489535 LEPROTL1O95214 131 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms