RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PPP1R2P9O14990 202 aa9.84□□□□□ -0.83
HLA-F-229ENST00000489502 MT-ND4LP03901 98 aa9.84□□□□□ -0.83
HLA-F-229ENST00000489502 RIGQ13278 110 aa9.84□□□□□ -0.83
HLA-F-229ENST00000489502 OR10J3Q5JRS4 329 aa9.84□□□□□ -0.83
HLA-F-229ENST00000489502 MRPL54Q6P161 138 aaKnown RBP9.84□□□□□ -0.83
HLA-F-229ENST00000489502 SEC11CQ9BY50 192 aa9.84□□□□□ -0.83
HLA-F-229ENST00000489502 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
HLA-F-229ENST00000489502 LELP1Q5T871 98 aa9.83□□□□□ -0.84
HLA-F-229ENST00000489502 RASL11AQ6T310 242 aa9.83□□□□□ -0.84
HLA-F-229ENST00000489502 GATD1Q8NB37 220 aa9.83□□□□□ -0.84
HLA-F-229ENST00000489502 CAMPP49913 170 aa9.82□□□□□ -0.84
HLA-F-229ENST00000489502 TTC32Q5I0X7 151 aa9.82□□□□□ -0.84
HLA-F-229ENST00000489502 AMN1Q8IY45 258 aa9.82□□□□□ -0.84
HLA-F-229ENST00000489502 Q8N3U1 123 aa9.82□□□□□ -0.84
HLA-F-229ENST00000489502 RPL39LQ96EH5 51 aaKnown RBP9.82□□□□□ -0.84
HLA-F-229ENST00000489502 TMEM191AQ9H0A3 160 aa9.82□□□□□ -0.84
HLA-F-229ENST00000489502 DNAH2Q9P225 4427 aa9.81□□□□□ -0.84
HLA-F-229ENST00000489502 TRAV8-6A0A0B4J262 113 aa9.81□□□□□ -0.84
HLA-F-229ENST00000489502 ANAPC16Q96DE5 110 aa9.81□□□□□ -0.84
HLA-F-229ENST00000489502 RNF185Q96GF1 192 aa9.81□□□□□ -0.84
HLA-F-229ENST00000489502 CARHSP1Q9Y2V2 147 aaKnown RBP9.81□□□□□ -0.84
HLA-F-229ENST00000489502 TNFRSF18Q9Y5U5 241 aa9.81□□□□□ -0.84
HLA-F-229ENST00000489502 A0A1B0GXF2 115 aa9.8□□□□□ -0.84
HLA-F-229ENST00000489502 GAS8-AS1O95177 125 aa9.8□□□□□ -0.84
HLA-F-229ENST00000489502 NCR2O95944 276 aa9.8□□□□□ -0.84
HLA-F-229ENST00000489502 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
HLA-F-229ENST00000489502 DEFB104AQ8WTQ1 72 aa9.8□□□□□ -0.84
HLA-F-229ENST00000489502 NIT2Q9NQR4 276 aa9.8□□□□□ -0.84
HLA-F-229ENST00000489502 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
HLA-F-229ENST00000489502 A0A087WWC5 75 aa9.79□□□□□ -0.84
HLA-F-229ENST00000489502 SMKR1H3BMG3 65 aa9.79□□□□□ -0.84
HLA-F-229ENST00000489502 HBBP68871 147 aa9.79□□□□□ -0.84
HLA-F-229ENST00000489502 C10orf91Q5T1B1 145 aa9.79□□□□□ -0.84
HLA-F-229ENST00000489502 DNAJC30Q96LL9 226 aa9.79□□□□□ -0.84
HLA-F-229ENST00000489502 RTL8CO15255 209 aa9.78□□□□□ -0.84
HLA-F-229ENST00000489502 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
HLA-F-229ENST00000489502 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
HLA-F-229ENST00000489502 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
HLA-F-229ENST00000489502 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
HLA-F-229ENST00000489502 RAB4AP20338 218 aa9.78□□□□□ -0.84
HLA-F-229ENST00000489502 C1orf134Q5TEV5 83 aa9.78□□□□□ -0.84
HLA-F-229ENST00000489502 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
HLA-F-229ENST00000489502 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
HLA-F-229ENST00000489502 TRBV6-8A0A0A6YYG3 113 aa9.77□□□□□ -0.85
HLA-F-229ENST00000489502 A0A1B0GW15 77 aa9.77□□□□□ -0.85
HLA-F-229ENST00000489502 RPS10P46783 165 aaKnown RBP9.77□□□□□ -0.85
HLA-F-229ENST00000489502 LINC01556Q5JQF7 62 aa9.77□□□□□ -0.85
HLA-F-229ENST00000489502 NTM-AS1Q6ZSK4 140 aa9.77□□□□□ -0.85
HLA-F-229ENST00000489502 C6orf223Q8N319 242 aa9.77□□□□□ -0.85
HLA-F-229ENST00000489502 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.77□□□□□ -0.85
HLA-F-229ENST00000489502 MRPL51Q4U2R6 128 aaKnown RBP9.76□□□□□ -0.85
HLA-F-229ENST00000489502 FAM104BQ5XKR9 115 aa9.76□□□□□ -0.85
HLA-F-229ENST00000489502 ATP5L2Q7Z4Y8 100 aa9.76□□□□□ -0.85
HLA-F-229ENST00000489502 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
HLA-F-229ENST00000489502 MRAP2Q96G30 205 aa9.76□□□□□ -0.85
HLA-F-229ENST00000489502 CTDSP1Q9GZU7 261 aa9.76□□□□□ -0.85
HLA-F-229ENST00000489502 C7orf77A4D0Y5 90 aa9.75□□□□□ -0.85
HLA-F-229ENST00000489502 APOC3P02656 99 aa9.75□□□□□ -0.85
HLA-F-229ENST00000489502 S100A8P05109 93 aa9.75□□□□□ -0.85
HLA-F-229ENST00000489502 NIT1Q86X76 327 aa9.75□□□□□ -0.85
HLA-F-229ENST00000489502 SDHAF1A6NFY7 115 aa9.74□□□□□ -0.85
HLA-F-229ENST00000489502 RHEBQ15382 184 aa9.74□□□□□ -0.85
HLA-F-229ENST00000489502 SLC7A5P1Q8MH63 180 aa9.74□□□□□ -0.85
HLA-F-229ENST00000489502 FRZBQ92765 325 aa9.74□□□□□ -0.85
HLA-F-229ENST00000489502 CHCHD5Q9BSY4 110 aa9.74□□□□□ -0.85
HLA-F-229ENST00000489502 RPS10P5Q9NQ39 176 aa9.74□□□□□ -0.85
HLA-F-229ENST00000489502 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
HLA-F-229ENST00000489502 DNAH17Q9UFH2 4485 aa9.74□□□□□ -0.85
HLA-F-229ENST00000489502 TRBV25-1A0A075B6N4 114 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 TRAV9-2A0A087WT02 112 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 IGHV1-24A0A0C4DH33 117 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 NDUFA5Q16718 116 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 TMEM97Q5BJF2 176 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 KCNIP4Q6PIL6 250 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 C10orf126Q8N4M7 172 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 NRACQ8N912 160 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 BTF3L4Q96K17 158 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 URGCP-MRPS24S4R325 110 aa9.73□□□□□ -0.85
HLA-F-229ENST00000489502 TRBV6-5A0A0K0K1A5 114 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 GAGE6Q13070 117 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 COTL1Q14019 142 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 IQCJQ1A5X6 159 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 IMMP2LQ96T52 175 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 TMEM70Q9BUB7 260 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 Q9HAA7 133 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 ST20Q9HBF5 79 aa9.72□□□□□ -0.85
HLA-F-229ENST00000489502 A0A087WX48 190 aa9.71□□□□□ -0.86
HLA-F-229ENST00000489502 PRSS29PA6NIE9 313 aa9.71□□□□□ -0.86
HLA-F-229ENST00000489502 D6R8Y8 96 aa9.71□□□□□ -0.86
HLA-F-229ENST00000489502 TMEM262E9PQX1 116 aa9.71□□□□□ -0.86
HLA-F-229ENST00000489502 CKS2P33552 79 aa9.71□□□□□ -0.86
HLA-F-229ENST00000489502 AMTP48728 403 aa9.71□□□□□ -0.86
HLA-F-229ENST00000489502 TMEM243Q9BU79 118 aa9.71□□□□□ -0.86
HLA-F-229ENST00000489502 TMEM242Q9NWH2 141 aa9.71□□□□□ -0.86
HLA-F-229ENST00000489502 IBA57-AS1B1ANH7 110 aa9.7□□□□□ -0.86
HLA-F-229ENST00000489502 K7EP13 123 aa9.7□□□□□ -0.86
HLA-F-229ENST00000489502 S100PP25815 95 aa9.7□□□□□ -0.86
HLA-F-229ENST00000489502 TNP2Q05952 138 aa9.7□□□□□ -0.86
HLA-F-229ENST00000489502 Q6ZRN7 208 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms