RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 ZNF664Q8N3J9 261 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
CLDN11-209ENST00000489485 CRYGDP07320 174 aa10.07□□□□□ -0.8
CLDN11-209ENST00000489485 Q0VG73 95 aa10.07□□□□□ -0.8
CLDN11-209ENST00000489485 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
CLDN11-209ENST00000489485 C18orf15Q96N68 181 aa10.07□□□□□ -0.8
CLDN11-209ENST00000489485 DEFB131BA0A096LNP1 70 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 TMEM136Q6ZRR5 245 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 AMN1Q8IY45 258 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 TRAV4A0A0B4J268 109 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 F5H768 121 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 C21orf62-AS1Q17RA5 79 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 PHLDA1Q8WV24 401 aaPredicted RBP10.06□□□□□ -0.8
CLDN11-209ENST00000489485 C2orf88Q9BSF0 95 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 KIF25-AS1Q9Y6Z4 181 aa10.06□□□□□ -0.8
CLDN11-209ENST00000489485 TRAV10A0A0B4J240 114 aa10.05□□□□□ -0.8
CLDN11-209ENST00000489485 RS1O15537 224 aa10.05□□□□□ -0.8
CLDN11-209ENST00000489485 MGPP08493 103 aa10.05□□□□□ -0.8
CLDN11-209ENST00000489485 BAGE3Q86Y29 109 aa10.05□□□□□ -0.8
CLDN11-209ENST00000489485 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 F5H697 171 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 HLA-DQA1P01909 254 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 LINC00315P59091 139 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 SLAQ13239 276 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 OR10J3Q5JRS4 329 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 FAM104BQ5XKR9 115 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 RAB4AP20338 218 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 ZNF56Q15929 161 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 UFSP1Q6NVU6 142 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 MUC7Q8TAX7 377 aa10.04□□□□□ -0.8
CLDN11-209ENST00000489485 TRAV26-2A0A0B4J265 109 aa10.03□□□□□ -0.8
CLDN11-209ENST00000489485 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
CLDN11-209ENST00000489485 RNF185Q96GF1 192 aa10.03□□□□□ -0.8
CLDN11-209ENST00000489485 FHL2Q14192 279 aa10.02□□□□□ -0.8
CLDN11-209ENST00000489485 ZFAND6Q6FIF0 208 aa10.02□□□□□ -0.8
CLDN11-209ENST00000489485 ZFP2Q6ZN57 461 aa10.02□□□□□ -0.8
CLDN11-209ENST00000489485 RHODO00212 210 aa10.02□□□□□ -0.81
CLDN11-209ENST00000489485 SERF1AO75920 110 aa10.02□□□□□ -0.81
CLDN11-209ENST00000489485 APCSP02743 223 aa10.02□□□□□ -0.81
CLDN11-209ENST00000489485 KIAA1644Q3SXP7 199 aa10.02□□□□□ -0.81
CLDN11-209ENST00000489485 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.81
CLDN11-209ENST00000489485 Q6ZSN1 163 aa10.02□□□□□ -0.81
CLDN11-209ENST00000489485 HHLA3Q9XRX5 114 aa10.02□□□□□ -0.81
CLDN11-209ENST00000489485 CSMD3Q7Z407 3707 aa10.02□□□□□ -0.81
CLDN11-209ENST00000489485 CIDEAO60543 219 aa10.01□□□□□ -0.81
CLDN11-209ENST00000489485 TRAV26-1A0A087WT03 109 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 A0A0J9YY99 117 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 NUPR2A6NF83 97 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 IGLL5B9A064 214 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 SMKR1H3BMG3 65 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 GAS8-AS1O95177 125 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 CEMP1Q6PRD7 247 aaPredicted RBP10□□□□□ -0.81
CLDN11-209ENST00000489485 PRO0255Q9UI72 69 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 D6R8Y8 96 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 NUPR1O60356 82 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 NCR2O95944 276 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 CKS2P33552 79 aa10□□□□□ -0.81
CLDN11-209ENST00000489485 A0A1B0GV90 55 aa9.99□□□□□ -0.81
CLDN11-209ENST00000489485 M0R143 59 aa9.99□□□□□ -0.81
CLDN11-209ENST00000489485 GATA1P15976 413 aaPredicted RBP9.99□□□□□ -0.81
CLDN11-209ENST00000489485 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
CLDN11-209ENST00000489485 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
CLDN11-209ENST00000489485 TENM2Q9NT68 2774 aa9.99□□□□□ -0.81
CLDN11-209ENST00000489485 PAX4O43316 350 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 CRYBA4P53673 196 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 Q9UF83 564 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 KLK5Q9Y337 293 aaPredicted RBP9.98□□□□□ -0.81
CLDN11-209ENST00000489485 DNAH7Q8WXX0 4024 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 M0QY20 66 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 P0DMU3 169 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 FAM231AP0DMU4 169 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 FAM231CP0DMU5 169 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 LINC00310P59036 64 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 MRAP2Q96G30 205 aa9.98□□□□□ -0.81
CLDN11-209ENST00000489485 TRBV6-4A0A1B0GX49 114 aa9.97□□□□□ -0.81
CLDN11-209ENST00000489485 ORMDL3Q8N138 153 aa9.97□□□□□ -0.81
CLDN11-209ENST00000489485 RPL39LQ96EH5 51 aaKnown RBP9.97□□□□□ -0.81
CLDN11-209ENST00000489485 VSIG2Q96IQ7 327 aa9.97□□□□□ -0.81
CLDN11-209ENST00000489485 VAMP8Q9BV40 100 aa9.97□□□□□ -0.81
CLDN11-209ENST00000489485 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.81
CLDN11-209ENST00000489485 C3orf84H3BNL1 204 aa9.96□□□□□ -0.82
CLDN11-209ENST00000489485 K7EQD1 137 aa9.96□□□□□ -0.82
CLDN11-209ENST00000489485 PPBPP02775 128 aa9.96□□□□□ -0.82
CLDN11-209ENST00000489485 SRIP30626 198 aa9.96□□□□□ -0.82
CLDN11-209ENST00000489485 RHOHQ15669 191 aa9.96□□□□□ -0.82
CLDN11-209ENST00000489485 PRELID3AQ96N28 172 aa9.96□□□□□ -0.82
CLDN11-209ENST00000489485 MIEN1Q9BRT3 115 aa9.96□□□□□ -0.82
CLDN11-209ENST00000489485 H7C1H1 209 aa9.95□□□□□ -0.82
CLDN11-209ENST00000489485 NUDT3O95989 172 aa9.95□□□□□ -0.82
CLDN11-209ENST00000489485 AMTP48728 403 aa9.95□□□□□ -0.82
CLDN11-209ENST00000489485 CASC10Q5T4H9 136 aa9.95□□□□□ -0.82
CLDN11-209ENST00000489485 LOC100131303A0A0U1RQF7 123 aa9.94□□□□□ -0.82
CLDN11-209ENST00000489485 NPYP01303 97 aa9.94□□□□□ -0.82
CLDN11-209ENST00000489485 GYPEP15421 78 aa9.94□□□□□ -0.82
CLDN11-209ENST00000489485 NRACQ8N912 160 aa9.94□□□□□ -0.82
CLDN11-209ENST00000489485 ALKBH7Q9BT30 221 aaPredicted RBP9.94□□□□□ -0.82
CLDN11-209ENST00000489485 H3BNG1 76 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms