RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ZFP2Q6ZN57 461 aa5.65□□□□□ -1.51
SSBP1-212ENST00000489378 PTH2Q96A98 100 aa5.65□□□□□ -1.51
SSBP1-212ENST00000489378 JPT2Q9H910 190 aa5.65□□□□□ -1.51
SSBP1-212ENST00000489378 C7orf66A4D0T2 115 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 FAM231BA6NCW3 169 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 LYRM1O43325 122 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 TCRBP04435 133 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 TRIQKQ629K1 86 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 CLPSL2Q6UWE3 100 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 OR10G7Q8NGN6 311 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 OR2G3Q8NGZ4 309 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 TMED6Q8WW62 240 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 UQCC1Q9NVA1 299 aa5.64□□□□□ -1.51
SSBP1-212ENST00000489378 IGKV2-24A0A0C4DH68 120 aa5.63□□□□□ -1.51
SSBP1-212ENST00000489378 UBE2L5PA0A1B0GUS4 154 aa5.63□□□□□ -1.51
SSBP1-212ENST00000489378 CST7O76096 145 aa5.63□□□□□ -1.51
SSBP1-212ENST00000489378 RNASE3P12724 160 aaKnown RBP5.63□□□□□ -1.51
SSBP1-212ENST00000489378 COX6A2Q02221 97 aa5.63□□□□□ -1.51
SSBP1-212ENST00000489378 BAXQ07812 192 aa5.63□□□□□ -1.51
SSBP1-212ENST00000489378 TOMM5Q8N4H5 51 aa5.63□□□□□ -1.51
SSBP1-212ENST00000489378 STPG4Q8N801 248 aa5.63□□□□□ -1.51
SSBP1-212ENST00000489378 TMEM75Q8N9X5 138 aa5.63□□□□□ -1.51
SSBP1-212ENST00000489378 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.62□□□□□ -1.51
SSBP1-212ENST00000489378 FAM24AA6NFZ4 105 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 A8MWV9 139 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 F5H697 171 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 CCSO14618 274 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 SNAI2O43623 268 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 ZNF80P51504 273 aaPredicted RBP5.62□□□□□ -1.51
SSBP1-212ENST00000489378 SUMO2P61956 95 aaKnown RBP5.62□□□□□ -1.51
SSBP1-212ENST00000489378 NDUFA5Q16718 116 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 LGALSLQ3ZCW2 172 aaPredicted RBP5.62□□□□□ -1.51
SSBP1-212ENST00000489378 SMIM15Q7Z3B0 74 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 BOD1L2Q8IYS8 172 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 SGK494Q96LW2 274 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 HYLS1Q96M11 299 aa5.62□□□□□ -1.51
SSBP1-212ENST00000489378 TRAV26-2A0A0B4J265 109 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 C9orf170A2RU37 121 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 TRIAP1O43715 76 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 NDUFB6O95139 128 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 MBPP02686 304 aaPredicted RBP5.61□□□□□ -1.51
SSBP1-212ENST00000489378 IAH1Q2TAA2 248 aaPredicted RBP5.61□□□□□ -1.51
SSBP1-212ENST00000489378 UQCC3Q6UW78 93 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 PRR26Q8N8Z3 221 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 PRSS3P2Q8NHM4 247 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 PRR34Q9NV39 138 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 GSKIPQ9P0R6 139 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 PSORS1C2Q9UIG4 136 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
SSBP1-212ENST00000489378 IGLV10-54A0A075B6I4 117 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 TRBV6-8A0A0A6YYG3 113 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 PTTG1O95997 202 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 PMCHP20382 165 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 FGF7P21781 194 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 UBE2D3P61077 147 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 UBE2D2P62837 147 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 Q6ZNX1 250 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 GOLT1AQ6ZVE7 132 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 LINC00269Q8N2A0 174 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 ZNF664Q8N3J9 261 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 INO80EQ8NBZ0 244 aaPredicted RBP5.6□□□□□ -1.51
SSBP1-212ENST00000489378 PACRGQ96M98 296 aaPredicted RBP5.6□□□□□ -1.51
SSBP1-212ENST00000489378 MARVELD1Q9BSK0 173 aa5.6□□□□□ -1.51
SSBP1-212ENST00000489378 TMEM238C9JI98 176 aa5.59□□□□□ -1.51
SSBP1-212ENST00000489378 OR7C2O60412 319 aa5.59□□□□□ -1.51
SSBP1-212ENST00000489378 PET100P0DJ07 73 aa5.59□□□□□ -1.51
SSBP1-212ENST00000489378 CACNG7P62955 275 aa5.59□□□□□ -1.51
SSBP1-212ENST00000489378 Q6ZRP5 223 aa5.59□□□□□ -1.51
SSBP1-212ENST00000489378 SLC25A21Q9BQT8 299 aaPredicted RBP5.59□□□□□ -1.51
SSBP1-212ENST00000489378 SEC22CQ9BRL7 303 aa5.59□□□□□ -1.51
SSBP1-212ENST00000489378 MAP1LC3CQ9BXW4 147 aa5.59□□□□□ -1.51
SSBP1-212ENST00000489378 NMES1Q9C002 83 aa5.59□□□□□ -1.51
SSBP1-212ENST00000489378 NAP1L6A6NFF2 107 aa5.58□□□□□ -1.52
SSBP1-212ENST00000489378 FAUP35544 74 aaKnown RBP5.58□□□□□ -1.52
SSBP1-212ENST00000489378 UBE2L3P68036 154 aaKnown RBP5.58□□□□□ -1.52
SSBP1-212ENST00000489378 UBE2V1Q13404 147 aa5.58□□□□□ -1.52
SSBP1-212ENST00000489378 DEDD2Q8WXF8 326 aa5.58□□□□□ -1.52
SSBP1-212ENST00000489378 CHCHD5Q9BSY4 110 aa5.58□□□□□ -1.52
SSBP1-212ENST00000489378 NPCDR1Q9BY65 106 aa5.58□□□□□ -1.52
SSBP1-212ENST00000489378 A0A096LNI7 61 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 CENPXA8MT69 81 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 HSBP1O75506 76 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 RBX1P62877 108 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 COX19Q49B96 90 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 PIK3CD-AS1Q5SR53 167 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 FAM74A4Q5TZK3 123 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 C11orf1Q9H5F2 150 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 OTORQ9NRC9 128 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 LSM5Q9Y4Y9 91 aaKnown RBP5.57□□□□□ -1.52
SSBP1-212ENST00000489378 ALG5Q9Y673 324 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 TRBV7-3A0A075B6L6 115 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 IGSF23A1L1A6 192 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 INMT-MINDY4F8WBC2 141 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 RHODO00212 210 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 GCGP01275 180 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 IFNA7P01567 189 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 RAB5CP51148 216 aa5.57□□□□□ -1.52
SSBP1-212ENST00000489378 S100A10P60903 97 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms