RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 H7C1H1 209 aa8.13□□□□□ -1.11
CMSS1-205ENST00000489081 PPP1R17O96001 155 aa8.13□□□□□ -1.11
CMSS1-205ENST00000489081 NDUFA6P56556 154 aa8.13□□□□□ -1.11
CMSS1-205ENST00000489081 COA6Q5JTJ3 125 aaKnown RBP8.13□□□□□ -1.11
CMSS1-205ENST00000489081 NBEAL2Q6ZNJ1 2754 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 TRGV4A0A0C4DH28 118 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 TRBV6-5A0A0K0K1A5 114 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 PRSS47A8MTI9 375 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 P0DMU3 169 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 FAM231AP0DMU4 169 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 FAM231CP0DMU5 169 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 C12orf74Q32Q52 190 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 C20orf78Q9BR46 151 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 MAP1LC3AQ9H492 121 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 NIT2Q9NQR4 276 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 NACAE9PAV3 2078 aa8.12□□□□□ -1.11
CMSS1-205ENST00000489081 LOC389332A0A1B0GUA5 103 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 TRBV6-4A0A1B0GX49 114 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 K7EQD1 137 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 ATP5G1P05496 136 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 S100A6P06703 90 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 HOXA5P20719 270 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 LINC00310P59036 64 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 SUMO2P61956 95 aaKnown RBP8.11□□□□□ -1.11
CMSS1-205ENST00000489081 SLC25A29Q8N8R3 303 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 NEXN-AS1Q8NBZ9 246 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 URB1-AS1Q96HZ7 61 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 ST20Q9HBF5 79 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 Q9UF83 564 aa8.11□□□□□ -1.11
CMSS1-205ENST00000489081 HUWE1Q7Z6Z7 4374 aaKnown RBP8.1□□□□□ -1.11
CMSS1-205ENST00000489081 IGLV2-18A0A075B6J9 118 aa8.1□□□□□ -1.11
CMSS1-205ENST00000489081 TRBV10-1A0A0K0K1A3 114 aa8.1□□□□□ -1.11
CMSS1-205ENST00000489081 SERF1AO75920 110 aa8.1□□□□□ -1.11
CMSS1-205ENST00000489081 NHLRC4P0CG21 123 aaPredicted RBP8.1□□□□□ -1.11
CMSS1-205ENST00000489081 POLR2KP53803 58 aaKnown RBP8.1□□□□□ -1.11
CMSS1-205ENST00000489081 RPL32P62910 135 aaKnown RBP8.1□□□□□ -1.11
CMSS1-205ENST00000489081 NIT1Q86X76 327 aa8.1□□□□□ -1.11
CMSS1-205ENST00000489081 PRSS3P2Q8NHM4 247 aa8.1□□□□□ -1.11
CMSS1-205ENST00000489081 DNAJC30Q96LL9 226 aa8.1□□□□□ -1.11
CMSS1-205ENST00000489081 TMEM70Q9BUB7 260 aa8.1□□□□□ -1.11
CMSS1-205ENST00000489081 SMIM2Q9BVW6 85 aa8.1□□□□□ -1.11
CMSS1-205ENST00000489081 SDHAF1A6NFY7 115 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 C5orf52A6NGY3 159 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 NUPR1O60356 82 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 LINC00614P0C842 121 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 IFI27P40305 119 aaPredicted RBP8.09□□□□□ -1.11
CMSS1-205ENST00000489081 CRYBA4P53673 196 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 RHOHQ15669 191 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 Q8N8P6 123 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 C11orf45Q8TAV5 145 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 NXT2Q9NPJ8 142 aaKnown RBP8.09□□□□□ -1.11
CMSS1-205ENST00000489081 PRO0255Q9UI72 69 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 HHLA3Q9XRX5 114 aa8.09□□□□□ -1.11
CMSS1-205ENST00000489081 ESDP10768 282 aa8.08□□□□□ -1.12
CMSS1-205ENST00000489081 PMCHP20382 165 aa8.08□□□□□ -1.12
CMSS1-205ENST00000489081 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
CMSS1-205ENST00000489081 SNRPEP62304 92 aaKnown RBP8.08□□□□□ -1.12
CMSS1-205ENST00000489081 RNASEKQ6P5S7 137 aaKnown RBP8.08□□□□□ -1.12
CMSS1-205ENST00000489081 Q6ZTC4 211 aa8.08□□□□□ -1.12
CMSS1-205ENST00000489081 FA2HQ7L5A8 372 aa8.08□□□□□ -1.12
CMSS1-205ENST00000489081 CHCHD1Q96BP2 118 aaKnown RBP8.08□□□□□ -1.12
CMSS1-205ENST00000489081 PRADC1Q9BSG0 188 aa8.08□□□□□ -1.12
CMSS1-205ENST00000489081 TNFRSF18Q9Y5U5 241 aa8.08□□□□□ -1.12
CMSS1-205ENST00000489081 DNAH9Q9NYC9 4486 aa8.08□□□□□ -1.12
CMSS1-205ENST00000489081 TRBV7-3A0A075B6L6 115 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 TRBV27A0A0K0K1C4 114 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 LOC100131303A0A0U1RQF7 123 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 LINC01546A6NGU7 62 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 F5H768 121 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 VCYO14598 125 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-205ENST00000489081 HTN3P15516 51 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 RPL36AP83881 106 aaKnown RBP8.07□□□□□ -1.12
CMSS1-205ENST00000489081 NEGR1Q7Z3B1 354 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 RPL36ALQ969Q0 106 aaKnown RBP8.07□□□□□ -1.12
CMSS1-205ENST00000489081 AP5S1Q9NUS5 200 aa8.07□□□□□ -1.12
CMSS1-205ENST00000489081 GAGE12JA6NER3 117 aa8.06□□□□□ -1.12
CMSS1-205ENST00000489081 PAX4O43316 350 aa8.06□□□□□ -1.12
CMSS1-205ENST00000489081 GAGE1Q13065 139 aa8.06□□□□□ -1.12
CMSS1-205ENST00000489081 GAGE4Q13068 117 aa8.06□□□□□ -1.12
CMSS1-205ENST00000489081 GAGE5Q13069 117 aa8.06□□□□□ -1.12
CMSS1-205ENST00000489081 GAGE13Q4V321 117 aa8.06□□□□□ -1.12
CMSS1-205ENST00000489081 HIST3H2BBQ8N257 126 aa8.06□□□□□ -1.12
CMSS1-205ENST00000489081 VSIG2Q96IQ7 327 aa8.06□□□□□ -1.12
CMSS1-205ENST00000489081 TCAPO15273 167 aa8.05□□□□□ -1.12
CMSS1-205ENST00000489081 HSBP1O75506 76 aa8.05□□□□□ -1.12
CMSS1-205ENST00000489081 LINC00694P0DN24 101 aa8.05□□□□□ -1.12
CMSS1-205ENST00000489081 GYPEP15421 78 aa8.05□□□□□ -1.12
CMSS1-205ENST00000489081 UBE2D3P61077 147 aa8.05□□□□□ -1.12
CMSS1-205ENST00000489081 UBE2D2P62837 147 aa8.05□□□□□ -1.12
CMSS1-205ENST00000489081 PDZD11Q5EBL8 140 aa8.05□□□□□ -1.12
CMSS1-205ENST00000489081 TENM3Q9P273 2699 aa8.05□□□□□ -1.12
CMSS1-205ENST00000489081 TRAV26-1A0A087WT03 109 aa8.04□□□□□ -1.12
CMSS1-205ENST00000489081 A0A0J9YY99 117 aa8.04□□□□□ -1.12
CMSS1-205ENST00000489081 I3L3M4 83 aa8.04□□□□□ -1.12
CMSS1-205ENST00000489081 K7EMI3 77 aa8.04□□□□□ -1.12
CMSS1-205ENST00000489081 FAM19A2Q8N3H0 131 aa8.04□□□□□ -1.12
CMSS1-205ENST00000489081 PHLDA1Q8WV24 401 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms