RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 SSTP61278 116 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
USP11-209ENST00000488848 ZNF56Q15929 161 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 FAM74A4Q5TZK3 123 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 CHCHD1Q96BP2 118 aaKnown RBP7.55□□□□□ -1.2
USP11-209ENST00000488848 NXT2Q9NPJ8 142 aaKnown RBP7.55□□□□□ -1.2
USP11-209ENST00000488848 TGP01266 2768 aa7.55□□□□□ -1.2
USP11-209ENST00000488848 CSMD3Q7Z407 3707 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 TRAV26-2A0A0B4J265 109 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 K7EQD1 137 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 TCAPO15273 167 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 NCR2O95944 276 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 ATP5G1P05496 136 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 MGPP08493 103 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 DAD1P61803 113 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 RHOHQ15669 191 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 C12orf74Q32Q52 190 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 DEFB121Q5J5C9 76 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 Q6ZSN1 163 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 URB1-AS1Q96HZ7 61 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 TMEM70Q9BUB7 260 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 SMIM2Q9BVW6 85 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 MAP1LC3AQ9H492 121 aa7.54□□□□□ -1.2
USP11-209ENST00000488848 SMKR1H3BMG3 65 aa7.53□□□□□ -1.2
USP11-209ENST00000488848 PMCHP20382 165 aa7.53□□□□□ -1.2
USP11-209ENST00000488848 EMP1P54849 157 aa7.53□□□□□ -1.2
USP11-209ENST00000488848 Q8N8P6 123 aa7.53□□□□□ -1.2
USP11-209ENST00000488848 SLC25A29Q8N8R3 303 aa7.53□□□□□ -1.2
USP11-209ENST00000488848 NEXN-AS1Q8NBZ9 246 aa7.53□□□□□ -1.2
USP11-209ENST00000488848 PRO0255Q9UI72 69 aa7.53□□□□□ -1.2
USP11-209ENST00000488848 A0A0J9YWU9 116 aa7.52□□□□□ -1.21
USP11-209ENST00000488848 SDHAF1A6NFY7 115 aa7.52□□□□□ -1.21
USP11-209ENST00000488848 DEFB130BP0DP73 79 aa7.52□□□□□ -1.21
USP11-209ENST00000488848 DEFB130AP0DP74 79 aa7.52□□□□□ -1.21
USP11-209ENST00000488848 HOXA5P20719 270 aa7.52□□□□□ -1.21
USP11-209ENST00000488848 CRYBA4P53673 196 aa7.52□□□□□ -1.21
USP11-209ENST00000488848 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
USP11-209ENST00000488848 ST20Q9HBF5 79 aa7.52□□□□□ -1.21
USP11-209ENST00000488848 TRBV7-3A0A075B6L6 115 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 TRAV26-1A0A087WT03 109 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 F5H697 171 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 VCYO14598 125 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 DEFB4AO15263 64 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 SERF1AO75920 110 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 UBE2D3P61077 147 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 UBE2D2P62837 147 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 DEFA6Q01524 100 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 AP5S1Q9NUS5 200 aa7.51□□□□□ -1.21
USP11-209ENST00000488848 TRGV4A0A0C4DH28 118 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 LINC01549A6NIU2 74 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 S100A6P06703 90 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 LINC00614P0C842 121 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 IFI27P40305 119 aaPredicted RBP7.5□□□□□ -1.21
USP11-209ENST00000488848 RPL36AP83881 106 aaKnown RBP7.5□□□□□ -1.21
USP11-209ENST00000488848 IQCJQ1A5X6 159 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
USP11-209ENST00000488848 NIT1Q86X76 327 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 BAGE3Q86Y29 109 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 RPL36ALQ969Q0 106 aaKnown RBP7.5□□□□□ -1.21
USP11-209ENST00000488848 PRADC1Q9BSG0 188 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
USP11-209ENST00000488848 HHLA3Q9XRX5 114 aa7.5□□□□□ -1.21
USP11-209ENST00000488848 IGHV3-73A0A0B4J1V6 119 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 I3L3M4 83 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 TIRAPP58753 221 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 ORMDL2Q53FV1 153 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 SH2D6Q7Z4S9 175 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 C11orf45Q8TAV5 145 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 VSIG2Q96IQ7 327 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 GTSF1LQ9H1H1 148 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
USP11-209ENST00000488848 PLECQ15149 4684 aaKnown RBP7.49□□□□□ -1.21
USP11-209ENST00000488848 A0A096LNJ9 63 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 P0DMU3 169 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 FAM231AP0DMU4 169 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 FAM231CP0DMU5 169 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 NDUFA6P56556 154 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 TMEM97Q5BJF2 176 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 Q6ZTC4 211 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 FA2HQ7L5A8 372 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 PRSS3P2Q8NHM4 247 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 Q9UF83 564 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 TMA7Q9Y2S6 64 aaKnown RBP7.48□□□□□ -1.21
USP11-209ENST00000488848 TNFRSF18Q9Y5U5 241 aa7.48□□□□□ -1.21
USP11-209ENST00000488848 IFITM10A6NMD0 228 aa7.47□□□□□ -1.21
USP11-209ENST00000488848 NUPR1O60356 82 aa7.47□□□□□ -1.21
USP11-209ENST00000488848 TSHBP01222 138 aa7.47□□□□□ -1.21
USP11-209ENST00000488848 NPSP0C0P6 89 aa7.47□□□□□ -1.21
USP11-209ENST00000488848 G0S2P27469 103 aa7.47□□□□□ -1.21
USP11-209ENST00000488848 SNRPEP62304 92 aaKnown RBP7.47□□□□□ -1.21
USP11-209ENST00000488848 LAGE3Q14657 143 aa7.47□□□□□ -1.21
USP11-209ENST00000488848 TRAV10A0A0B4J240 114 aa7.46□□□□□ -1.22
USP11-209ENST00000488848 IGHV1-24A0A0C4DH33 117 aa7.46□□□□□ -1.22
USP11-209ENST00000488848 PAX4O43316 350 aa7.46□□□□□ -1.22
USP11-209ENST00000488848 HSBP1O75506 76 aa7.46□□□□□ -1.22
USP11-209ENST00000488848 FCER1GP30273 86 aa7.46□□□□□ -1.22
USP11-209ENST00000488848 PDZD11Q5EBL8 140 aa7.46□□□□□ -1.22
USP11-209ENST00000488848 HIST1H2BLQ99880 126 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms