RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SPRY3O43610 288 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 BUB3O43684 328 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 NDUFC2O95298 119 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGLV1-47P01700 117 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGHV1-46P01743 117 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 NSUN5P1Q3KNT7 163 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 PMS2CLQ68D20 193 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 PRORYQ9H606 182 aa3.51□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGHV3OR16-10A0A075B7F0 116 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGHV3-72A0A0B4J1Y9 119 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGHV1-3A0A0C4DH29 117 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 TRBV6-5A0A0K0K1A5 114 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 COX7A2LO14548 114 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 ENSAO43768 121 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGHV1-8P0DP01 117 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 LINC00315P59091 139 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 KRTAP10-9P60411 292 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 ZNF415Q09FC8 603 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 RHOHQ15669 191 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 DEFB108BQ8NET1 73 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 EEF1AKMT3Q96AZ1 226 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 SPEGQ15772 3267 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 LAMA1P25391 3075 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 MALRD1Q5VYJ5 2156 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 TRAV8-3A0A0A6YYJ7 113 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 TINCRA0A1B0GVN0 87 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 EPOPA6NHQ4 379 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 VCYO14598 125 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 NBR2O15453 112 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 LOXP28300 417 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 PFN2P35080 140 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 RPL39P62891 51 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 SUMO4Q6EEV6 95 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 PRIMA1Q86XR5 153 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 LINC00477Q96M19 166 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 C9orf85Q96MD7 179 aa3.5□□□□□ -1.85
CDC42BPA-213ENST00000488131 ABCA1O95477 2261 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 NBEAQ8NFP9 2946 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGHV3-30-3P0DP02 117 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 RNASE4P34096 147 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 DAZ2Q13117 558 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 KLK9Q2XQG4 91 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 PRR9Q5T870 116 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 DAZ4Q86SG3 579 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 APRG1Q8IVJ8 170 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 TMEM86BQ8N661 226 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 DAZ1Q9NQZ3 744 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 DAZ3Q9NR90 486 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 KAAG1Q9UBP8 84 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 KLK9Q9UKQ9 250 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 WDFY3Q8IZQ1 3526 aa3.49□□□□□ -1.85
CDC42BPA-213ENST00000488131 TRAV12-2A0A075B6T6 113 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 TRAV21A0A0B4J279 112 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 KRTAP29-1A8MX34 341 aaPredicted RBP3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 USP17L23D6RBM5 183 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 RS1O15537 224 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 NDUFB3O43676 98 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 CTSGP08311 255 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 MGPP08493 103 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 SYNJ2BPP57105 145 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 NPC2P61916 151 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 ADAMTSL4-AS1Q5T5F5 129 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 LINC00336Q6ZUF6 198 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 RNF182Q8N6D2 247 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 NPBQ8NG41 125 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 DEFB127Q9H1M4 99 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 SERP1Q9Y6X1 66 aa3.48□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGHV1-58A0A0C4DH39 117 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 BUB1B-PAK6H3BSN5 160 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 MRPS36P82909 103 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 SERTAD4-AS1Q5TG53 156 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 LINC01561Q8N1V8 128 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 ZFAND2AQ8N6M9 145 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 CNEP1R1Q8N9A8 125 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 C9orf106Q8NAJ2 232 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 PRSS33Q8NF86 280 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 OBSCN-AS1Q96MR7 158 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 PHLDA3Q9Y5J5 127 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 CFAP54Q96N23 3096 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 MYO15AQ9UKN7 3530 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 WDR87Q6ZQQ6 2873 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 VPS13AQ96RL7 3174 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 IGLV4-3A0A075B6K6 122 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 FAM236DA0A1B0GTK5 79 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 TMEM178BH3BS89 294 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 FAM236CP0DP71 79 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 RNASE3P12724 160 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 Q6ZSV7 163 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 C20orf203Q8NBC4 194 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 NUP37Q8NFH4 326 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 ITLN2Q8WWU7 325 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 C16orf95Q9H693 158 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 NDUFA12Q9UI09 145 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 UBE2D4Q9Y2X8 147 aa3.47□□□□□ -1.85
CDC42BPA-213ENST00000488131 PRRC2AP48634 2157 aaKnown RBP3.46□□□□□ -1.85
CDC42BPA-213ENST00000488131 A0A0J9YXV3 536 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms