RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 INSL4Q14641 139 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LTC4SQ16873 150 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RTL8BQ17RB0 113 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 WHAMMP3Q1A5X7 153 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CCDC153Q494R4 210 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CCDC58Q4VC31 144 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LIN52Q52LA3 116 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OCIAD2Q56VL3 154 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 FAM74A1Q5RGS3 127 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NCMAPQ5T1S8 102 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 BVES-AS1Q5T3Y7 98 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 BCL2L15Q5TBC7 163 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 MINOS1Q5TGZ0 78 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HACD4Q5VWC8 232 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 C10orf113Q5VZT2 155 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR2T2Q6IF00 324 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PPP1R2P3Q6NXS1 205 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SLC48A1Q6P1K1 146 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 UNQ5815/PRO19632Q6UWF5 114 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TEX261Q6UWH6 196 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LINC00575Q6W349 94 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ATP11AUNQ6ZP68 121 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ZNF818PQ6ZRF7 136 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CYP2G1PQ6ZSU1 146 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SLC25A26Q70HW3 274 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 C6orf201Q7Z4U5 140 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TAC4Q86UU9 113 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TEN1Q86WV5 123 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PRR15Q8IV56 129 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 FAM223AQ8IWN6 122 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR8I2Q8N0Y5 310 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LINC00269Q8N2A0 174 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 FAM216BQ8N7L0 139 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TMEM35BQ8NCS4 154 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DEFB108BQ8NET1 73 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR4B1Q8NGF8 309 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR5A2Q8NGI9 324 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR2T35Q8NGX2 323 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR10X1Q8NGY0 326 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR10AG1Q8NH19 301 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ATP6V0E2Q8NHE4 81 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TMEM254Q8TBM7 123 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TMEM167AQ8TBQ9 72 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TEX47Q8TBZ9 253 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NEK7Q8TDX7 302 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TMEM263Q8WUH6 116 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SMIM4Q8WVI0 70 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SKA2Q8WVK7 121 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CANT1Q8WVQ1 401 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PPDPFLQ8WWR9 84 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PATE1Q8WXA2 126 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DNAJC9Q8WXX5 260 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LZICQ8WZA0 190 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DIRC1Q969H9 104 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RAB37Q96AX2 223 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ISOC1Q96CN7 298 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SLAMF6Q96DU3 332 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ADAT3Q96EY9 351 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 S100A16Q96FQ6 103 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CHMP6Q96FZ7 201 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 C14orf144Q96I85 54 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ARL5BQ96KC2 179 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CEP19Q96LK0 163 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LINC00052Q96N35 136 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PPP1R2P1Q96PQ5 205 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TRGV9Q99603 122 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HIST1H2BLQ99880 126 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HOPXQ9BPY8 73 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SELENOSQ9BQE4 189 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SLC25A21Q9BQT8 299 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TCEAL7Q9BRU2 100 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PRADC1Q9BSG0 188 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PSMG3Q9BT73 122 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 C9orf16Q9BUW7 83 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CCDC32Q9BV29 185 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PBDC1Q9BVG4 233 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RTL8AQ9BWD3 113 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SPANXDQ9BXN6 97 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SNHG12Q9BXW3 62 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SEC11CQ9BY50 192 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NMES1Q9C002 83 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OR2J1Q9GZK6 312 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 COMMD5Q9GZQ3 224 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 C6orf62Q9GZU0 229 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PBOV1Q9GZY1 135 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TMEM126AQ9H061 195 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 FAM107BQ9H098 131 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DPH3P1Q9H4G8 78 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NMNAT1Q9HAN9 279 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CACYBPQ9HB71 228 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PARVGQ9HBI0 331 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NIT2Q9NQR4 276 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 BATF3Q9NR55 127 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 OSTCQ9NRP0 149 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CMC2Q9NRP2 79 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TMEM14BQ9NUH8 114 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 SLC39A9Q9NUM3 307 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NHP2Q9NX24 153 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 BET1LQ9NYM9 111 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms