RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
SREBF1-215ENST00000487401 EIF5A2Q9GZV4 153 aaKnown RBP8.27□□□□□ -1.09
SREBF1-215ENST00000487401 A0A087WX48 190 aa8.26□□□□□ -1.09
SREBF1-215ENST00000487401 TRAV1-1A0A0B4J248 108 aa8.26□□□□□ -1.09
SREBF1-215ENST00000487401 RBFOX3A6NFN3 312 aa8.26□□□□□ -1.09
SREBF1-215ENST00000487401 LECT2O14960 151 aa8.26□□□□□ -1.09
SREBF1-215ENST00000487401 ELOBQ15370 118 aa8.26□□□□□ -1.09
SREBF1-215ENST00000487401 NIT1Q86X76 327 aa8.26□□□□□ -1.09
SREBF1-215ENST00000487401 HERC1Q15751 4861 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 TRBV7-3A0A075B6L6 115 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 IGKV2D-24A0A075B6R9 120 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 SCO2A0A1W2PP80 73 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 C7orf77A4D0Y5 90 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 TMEM262E9PQX1 116 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 CCL20P78556 96 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 WFDC2Q14508 124 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 RHEBQ15382 184 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 BAALCQ8WXS3 180 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 RPS10P5Q9NQ39 176 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 BIN3Q9NQY0 253 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 KLK12Q9UKR0 248 aa8.25□□□□□ -1.09
SREBF1-215ENST00000487401 SRP19P09132 144 aaKnown RBP8.24□□□□□ -1.09
SREBF1-215ENST00000487401 RAB4BP61018 213 aa8.24□□□□□ -1.09
SREBF1-215ENST00000487401 UBE2D3P61077 147 aa8.24□□□□□ -1.09
SREBF1-215ENST00000487401 UBE2D2P62837 147 aa8.24□□□□□ -1.09
SREBF1-215ENST00000487401 RPL19P84098 196 aaKnown RBP8.24□□□□□ -1.09
SREBF1-215ENST00000487401 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
SREBF1-215ENST00000487401 CHCHD7Q9BUK0 85 aa8.24□□□□□ -1.09
SREBF1-215ENST00000487401 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.23□□□□□ -1.09
SREBF1-215ENST00000487401 MT-ND4LP03901 98 aa8.23□□□□□ -1.09
SREBF1-215ENST00000487401 CXCL1P09341 107 aa8.23□□□□□ -1.09
SREBF1-215ENST00000487401 ZNF56Q15929 161 aa8.23□□□□□ -1.09
SREBF1-215ENST00000487401 SPANXN1Q5VSR9 72 aa8.23□□□□□ -1.09
SREBF1-215ENST00000487401 PRR27Q6MZM9 219 aa8.23□□□□□ -1.09
SREBF1-215ENST00000487401 Q8N976 141 aa8.23□□□□□ -1.09
SREBF1-215ENST00000487401 MLST8Q9BVC4 326 aa8.23□□□□□ -1.09
SREBF1-215ENST00000487401 FAM30AQ9NZY2 134 aa8.23□□□□□ -1.09
SREBF1-215ENST00000487401 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
SREBF1-215ENST00000487401 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
SREBF1-215ENST00000487401 F5H697 171 aa8.22□□□□□ -1.09
SREBF1-215ENST00000487401 RAB5BP61020 215 aa8.22□□□□□ -1.09
SREBF1-215ENST00000487401 SSTP61278 116 aa8.22□□□□□ -1.09
SREBF1-215ENST00000487401 OR10G8Q8NGN5 311 aa8.22□□□□□ -1.09
SREBF1-215ENST00000487401 OR10AG1Q8NH19 301 aa8.22□□□□□ -1.09
SREBF1-215ENST00000487401 TRBV6-8A0A0A6YYG3 113 aa8.21□□□□□ -1.1
SREBF1-215ENST00000487401 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.1
SREBF1-215ENST00000487401 SMIM17P0DL12 118 aa8.21□□□□□ -1.1
SREBF1-215ENST00000487401 Q0VG73 95 aa8.21□□□□□ -1.1
SREBF1-215ENST00000487401 LINC00518Q8N0U6 118 aa8.21□□□□□ -1.1
SREBF1-215ENST00000487401 DNAJC30Q96LL9 226 aa8.21□□□□□ -1.1
SREBF1-215ENST00000487401 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
SREBF1-215ENST00000487401 GNG13Q9P2W3 67 aa8.21□□□□□ -1.1
SREBF1-215ENST00000487401 SNAI2O43623 268 aa8.2□□□□□ -1.1
SREBF1-215ENST00000487401 OR5AL1P0C617 328 aa8.2□□□□□ -1.1
SREBF1-215ENST00000487401 RPL35P42766 123 aaKnown RBP8.2□□□□□ -1.1
SREBF1-215ENST00000487401 PKIAP61925 76 aa8.2□□□□□ -1.1
SREBF1-215ENST00000487401 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
SREBF1-215ENST00000487401 DAZAP1Q96EP5 407 aaKnown RBP8.2□□□□□ -1.1
SREBF1-215ENST00000487401 MANBALQ9NQG1 85 aa8.2□□□□□ -1.1
SREBF1-215ENST00000487401 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
SREBF1-215ENST00000487401 NDUFS6O75380 124 aaKnown RBP8.19□□□□□ -1.1
SREBF1-215ENST00000487401 CRPP02741 224 aa8.19□□□□□ -1.1
SREBF1-215ENST00000487401 RAB5AP20339 215 aa8.19□□□□□ -1.1
SREBF1-215ENST00000487401 YPEL4Q96NS1 127 aa8.19□□□□□ -1.1
SREBF1-215ENST00000487401 CHCHD5Q9BSY4 110 aa8.19□□□□□ -1.1
SREBF1-215ENST00000487401 TPPP3Q9BW30 176 aa8.19□□□□□ -1.1
SREBF1-215ENST00000487401 C1orf43Q9BWL3 253 aa8.19□□□□□ -1.1
SREBF1-215ENST00000487401 MYCBP2O75592 4640 aa8.18□□□□□ -1.1
SREBF1-215ENST00000487401 PLA2G1BP04054 148 aaKnown RBP8.18□□□□□ -1.1
SREBF1-215ENST00000487401 TMEM97Q5BJF2 176 aa8.18□□□□□ -1.1
SREBF1-215ENST00000487401 Q6ZSA8 131 aa8.18□□□□□ -1.1
SREBF1-215ENST00000487401 AP1S3Q96PC3 154 aa8.18□□□□□ -1.1
SREBF1-215ENST00000487401 IFNA1P01562 189 aa8.17□□□□□ -1.1
SREBF1-215ENST00000487401 ANGP03950 147 aaKnown RBP8.17□□□□□ -1.1
SREBF1-215ENST00000487401 BCL2P10415 239 aa8.17□□□□□ -1.1
SREBF1-215ENST00000487401 TAGLN2P37802 199 aaKnown RBP8.17□□□□□ -1.1
SREBF1-215ENST00000487401 RPS20P60866 119 aaKnown RBP8.17□□□□□ -1.1
SREBF1-215ENST00000487401 LINC01620Q4KN68 170 aa8.17□□□□□ -1.1
SREBF1-215ENST00000487401 C14orf177Q52M58 125 aa8.17□□□□□ -1.1
SREBF1-215ENST00000487401 CENPWQ5EE01 88 aa8.17□□□□□ -1.1
SREBF1-215ENST00000487401 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
SREBF1-215ENST00000487401 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
SREBF1-215ENST00000487401 VAX2Q9UIW0 290 aa8.17□□□□□ -1.1
SREBF1-215ENST00000487401 C5orf52A6NGY3 159 aa8.16□□□□□ -1.1
SREBF1-215ENST00000487401 GZMBP10144 247 aa8.16□□□□□ -1.1
SREBF1-215ENST00000487401 MPV17L2Q567V2 206 aa8.16□□□□□ -1.1
SREBF1-215ENST00000487401 ENHOQ6UWT2 76 aa8.16□□□□□ -1.1
SREBF1-215ENST00000487401 LINC00528Q8N1L1 170 aa8.16□□□□□ -1.1
SREBF1-215ENST00000487401 FER1L6-AS1Q8NA97 138 aa8.16□□□□□ -1.1
SREBF1-215ENST00000487401 OR2D3Q8NGH3 330 aa8.16□□□□□ -1.1
SREBF1-215ENST00000487401 ISOC2Q96AB3 205 aa8.16□□□□□ -1.1
SREBF1-215ENST00000487401 XKRY2A2RUG3 117 aa8.15□□□□□ -1.1
SREBF1-215ENST00000487401 H7C1H1 209 aa8.15□□□□□ -1.1
SREBF1-215ENST00000487401 J3QL48 77 aa8.15□□□□□ -1.1
SREBF1-215ENST00000487401 MGPP08493 103 aa8.15□□□□□ -1.1
SREBF1-215ENST00000487401 GNG4P50150 75 aa8.15□□□□□ -1.1
SREBF1-215ENST00000487401 AKR1D1P51857 326 aa8.15□□□□□ -1.1
SREBF1-215ENST00000487401 CACNG7P62955 275 aa8.15□□□□□ -1.1
SREBF1-215ENST00000487401 PNRC1Q12796 327 aaPredicted RBP8.15□□□□□ -1.1
SREBF1-215ENST00000487401 GAGE6Q13070 117 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms