RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TMEM238LA0A1B0GVL6 79 aa19.21■□□□□ 0.67
HLA-C-208ENST00000487245 A6NJY4 79 aa19.21■□□□□ 0.67
HLA-C-208ENST00000487245 KNCNA6PVL3 124 aa19.2■□□□□ 0.66
HLA-C-208ENST00000487245 F8W1H4 67 aa19.2■□□□□ 0.66
HLA-C-208ENST00000487245 H3BMM0 161 aa19.2■□□□□ 0.66
HLA-C-208ENST00000487245 CD300EQ496F6 205 aaPredicted RBP19.2■□□□□ 0.66
HLA-C-208ENST00000487245 DOPEY2Q9Y3R5 2298 aa19.2■□□□□ 0.66
HLA-C-208ENST00000487245 NFE4Q86UQ8 179 aa19.2■□□□□ 0.66
HLA-C-208ENST00000487245 PLEKHB2Q96CS7 222 aa19.2■□□□□ 0.66
HLA-C-208ENST00000487245 POLQO75417 2590 aa19.2■□□□□ 0.66
HLA-C-208ENST00000487245 PTPN13Q12923 2485 aa19.19■□□□□ 0.66
HLA-C-208ENST00000487245 KHDC1LQ5JSQ8 128 aa19.19■□□□□ 0.66
HLA-C-208ENST00000487245 KLHL30-AS1Q8NEE0 82 aa19.19■□□□□ 0.66
HLA-C-208ENST00000487245 DYNLRB2Q8TF09 96 aa19.19■□□□□ 0.66
HLA-C-208ENST00000487245 SCGB1D4Q6XE38 83 aa19.18■□□□□ 0.66
HLA-C-208ENST00000487245 UBE2D1P51668 147 aa19.18■□□□□ 0.66
HLA-C-208ENST00000487245 Q6ZSV7 163 aa19.18■□□□□ 0.66
HLA-C-208ENST00000487245 DLX4Q92988 240 aaPredicted RBP19.18■□□□□ 0.66
HLA-C-208ENST00000487245 SPANXB1Q9NS25 103 aaPredicted RBP19.18■□□□□ 0.66
HLA-C-208ENST00000487245 NAV2Q8IVL1 2488 aa19.18■□□□□ 0.66
HLA-C-208ENST00000487245 TMEM61Q8N0U2 210 aa19.17■□□□□ 0.66
HLA-C-208ENST00000487245 I3L3M4 83 aa19.16■□□□□ 0.66
HLA-C-208ENST00000487245 A0A0J9YY99 117 aa19.16■□□□□ 0.66
HLA-C-208ENST00000487245 PLA2G2AP14555 144 aa19.16■□□□□ 0.66
HLA-C-208ENST00000487245 C20orf203Q8NBC4 194 aa19.16■□□□□ 0.66
HLA-C-208ENST00000487245 ZNRF2Q8NHG8 242 aa19.16■□□□□ 0.66
HLA-C-208ENST00000487245 P0DMU3 169 aa19.15■□□□□ 0.66
HLA-C-208ENST00000487245 FAM231AP0DMU4 169 aa19.15■□□□□ 0.66
HLA-C-208ENST00000487245 FAM231CP0DMU5 169 aa19.15■□□□□ 0.66
HLA-C-208ENST00000487245 DEFB114Q30KQ6 69 aa19.15■□□□□ 0.66
HLA-C-208ENST00000487245 WFDC11Q8NEX6 87 aa19.15■□□□□ 0.66
HLA-C-208ENST00000487245 PIK3CD-AS1Q5SR53 167 aa19.14■□□□□ 0.65
HLA-C-208ENST00000487245 DNAJC9-AS1A6NH13 148 aa19.14■□□□□ 0.65
HLA-C-208ENST00000487245 J3QKU1 62 aa19.14■□□□□ 0.65
HLA-C-208ENST00000487245 SPAG8Q99932 426 aaPredicted RBP19.14■□□□□ 0.65
HLA-C-208ENST00000487245 RBMY1A1P0DJD3 496 aaKnown RBP19.13■□□□□ 0.65
HLA-C-208ENST00000487245 RBMY1CP0DJD4 496 aa19.13■□□□□ 0.65
HLA-C-208ENST00000487245 SRSF9Q13242 221 aaKnown RBP eCLIP19.13■□□□□ 0.65
HLA-C-208ENST00000487245 RBMY1FQ15415 496 aaKnown RBP19.13■□□□□ 0.65
HLA-C-208ENST00000487245 PTH2Q96A98 100 aa19.13■□□□□ 0.65
HLA-C-208ENST00000487245 DUX3Q96PT4 197 aa19.13■□□□□ 0.65
HLA-C-208ENST00000487245 MAP6D1Q9H9H5 199 aa19.13■□□□□ 0.65
HLA-C-208ENST00000487245 EMP1P54849 157 aa19.12■□□□□ 0.65
HLA-C-208ENST00000487245 COTL1Q14019 142 aa19.12■□□□□ 0.65
HLA-C-208ENST00000487245 TRAV25A0A0B4J276 109 aa19.11■□□□□ 0.65
HLA-C-208ENST00000487245 TMEM170BQ5T4T1 132 aa19.11■□□□□ 0.65
HLA-C-208ENST00000487245 AMELXQ99217 191 aa19.11■□□□□ 0.65
HLA-C-208ENST00000487245 LINC00467Q9BRT7 94 aa19.11■□□□□ 0.65
HLA-C-208ENST00000487245 CREBBPQ92793 2442 aa19.11■□□□□ 0.65
HLA-C-208ENST00000487245 TSPEAR-AS2P59090 65 aa19.11■□□□□ 0.65
HLA-C-208ENST00000487245 RBMY1BA6NDE4 496 aaKnown RBP19.1■□□□□ 0.65
HLA-C-208ENST00000487245 RBMY1EA6NEQ0 496 aaKnown RBP19.1■□□□□ 0.65
HLA-C-208ENST00000487245 RBMY1DP0C7P1 496 aaKnown RBP19.1■□□□□ 0.65
HLA-C-208ENST00000487245 SLC25A29Q8N8R3 303 aa19.1■□□□□ 0.65
HLA-C-208ENST00000487245 DEFB104AQ8WTQ1 72 aa19.1■□□□□ 0.65
HLA-C-208ENST00000487245 RAX2Q96IS3 184 aa19.1■□□□□ 0.65
HLA-C-208ENST00000487245 CLUHP3Q96NS8 147 aa19.1■□□□□ 0.65
HLA-C-208ENST00000487245 TEX48A0A1B0GUV7 120 aa19.09■□□□□ 0.65
HLA-C-208ENST00000487245 ZNF415Q09FC8 603 aa19.09■□□□□ 0.65
HLA-C-208ENST00000487245 PGPEP1Q9NXJ5 209 aa19.09■□□□□ 0.65
HLA-C-208ENST00000487245 PRO0461Q9UI25 63 aa19.09■□□□□ 0.65
HLA-C-208ENST00000487245 ZANQ9Y493 2812 aa19.09■□□□□ 0.65
HLA-C-208ENST00000487245 J3QQQ9 107 aa19.09■□□□□ 0.65
HLA-C-208ENST00000487245 LEPROTO15243 131 aa19.09■□□□□ 0.65
HLA-C-208ENST00000487245 RPL24P83731 157 aaKnown RBP19.09■□□□□ 0.65
HLA-C-208ENST00000487245 TMEM223A0PJW6 202 aa19.08■□□□□ 0.65
HLA-C-208ENST00000487245 A8MWV9 139 aa19.08■□□□□ 0.65
HLA-C-208ENST00000487245 H3BMG7 143 aa19.08■□□□□ 0.65
HLA-C-208ENST00000487245 M0R2P5 195 aa19.08■□□□□ 0.65
HLA-C-208ENST00000487245 PYGO1Q9Y3Y4 419 aa19.08■□□□□ 0.65
HLA-C-208ENST00000487245 WFDC2Q14508 124 aa19.07■□□□□ 0.64
HLA-C-208ENST00000487245 GAGE13Q4V321 117 aa19.07■□□□□ 0.64
HLA-C-208ENST00000487245 IGHV3-30P01768 117 aa19.07■□□□□ 0.64
HLA-C-208ENST00000487245 IGHV3-30-5P0DP03 117 aa19.07■□□□□ 0.64
HLA-C-208ENST00000487245 CRYBA4P53673 196 aa19.07■□□□□ 0.64
HLA-C-208ENST00000487245 MRPL16Q9NX20 251 aaKnown RBP19.07■□□□□ 0.64
HLA-C-208ENST00000487245 IGLV4-3A0A075B6K6 122 aa19.06■□□□□ 0.64
HLA-C-208ENST00000487245 HTN1P15515 57 aa19.05■□□□□ 0.64
HLA-C-208ENST00000487245 LGALS3P17931 250 aaKnown RBP19.05■□□□□ 0.64
HLA-C-208ENST00000487245 FHL3Q13643 280 aa19.05■□□□□ 0.64
HLA-C-208ENST00000487245 OPRPNQ99935 248 aaPredicted RBP19.04■□□□□ 0.64
HLA-C-208ENST00000487245 SPXQ9BT56 116 aa19.04■□□□□ 0.64
HLA-C-208ENST00000487245 ABCA12Q86UK0 2595 aa19.04■□□□□ 0.64
HLA-C-208ENST00000487245 TSPAN13O95857 204 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 INSP01308 110 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 ZNF22P17026 224 aaPredicted RBP19.03■□□□□ 0.64
HLA-C-208ENST00000487245 NDUFA11Q86Y39 141 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 CSMD2Q7Z408 3487 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 RHODO00212 210 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 UBE2D3P61077 147 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 UBE2D2P62837 147 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 LINC01587Q99440 93 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 VCX2Q9H322 139 aa19.03■□□□□ 0.64
HLA-C-208ENST00000487245 SORL1Q92673 2214 aa19.02■□□□□ 0.64
HLA-C-208ENST00000487245 MXRA5Q9NR99 2828 aa19.02■□□□□ 0.64
HLA-C-208ENST00000487245 LYRM7Q5U5X0 104 aa19.02■□□□□ 0.64
HLA-C-208ENST00000487245 ESM1Q9NQ30 184 aa19.02■□□□□ 0.64
HLA-C-208ENST00000487245 TEX15Q9BXT5 2789 aa19.01■□□□□ 0.63
HLA-C-208ENST00000487245 J3QR89 54 aa19.01■□□□□ 0.63
HLA-C-208ENST00000487245 CCL24O00175 119 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms