RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 HMGN1P05114 100 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 COX4I1P13073 169 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 MIFP14174 115 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 TAS2R30P59541 319 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 POLR2GP62487 172 aaKnown RBP eCLIP2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 RPL30P62888 115 aaKnown RBP2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 MPV17LQ2QL34 196 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 C12orf74Q32Q52 190 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 TMEM244Q5VVB8 128 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 STX19Q8N4C7 294 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 OR13C8Q8NGS7 320 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 YPEL2Q96QA6 119 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 GPER1Q99527 375 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 C6orf62Q9GZU0 229 aaPredicted RBP2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 TAF9BQ9HBM6 251 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 TVP23BQ9NYZ1 205 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 GNG8Q9UK08 70 aa2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 RBM7Q9Y580 266 aaKnown RBP2.09□□□□□ -2.07
PRPF38A-203ENST00000487160 TRBV20OR9-2A0A075B6H5 130 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 MUC21A0A0G2JKD1 596 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 NBDYA0A0U1RRE5 68 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 MUC21A0A140T8X8 626 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 C11orf86A6NJI1 115 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 MCRIP1C9JLW8 97 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 FNDC10F2Z333 226 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 PDE6DO43924 150 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 SULT1C4O75897 302 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 CTSDP07339 412 aaPredicted RBP2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 SRP19P09132 144 aaKnown RBP2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 RPL27AP46776 148 aaKnown RBP2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 XCL1P47992 114 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 C10orf55Q5SWW7 151 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 IDO2Q6ZQW0 420 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 Q6ZS49 121 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 ANKRD29Q8N6D5 301 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 OR51A2Q8NGJ7 313 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 MRPL30Q8TCC3 161 aaKnown RBP2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 ACOT12Q8WYK0 555 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 MIEN1Q9BRT3 115 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 WDR61Q9GZS3 305 aaKnown RBP2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 EFCAB1Q9HAE3 211 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 FAT1Q14517 4588 aa2.08□□□□□ -2.08
PRPF38A-203ENST00000487160 IGKV3-7A0A075B6H7 116 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 A0A1B0GW64 132 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 IGKV1-5P01602 117 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 APOA2P02652 100 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 HAMPP81172 84 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 HMGN3Q15651 99 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 GLT8D1Q68CQ7 371 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 TTC9CQ8N5M4 171 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 OR5D14Q8NGL3 314 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 DNAJC30Q96LL9 226 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 S100A13Q99584 98 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 TMEM147Q9BVK8 224 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 TAS2R4Q9NYW5 299 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 UFC1Q9Y3C8 167 aa2.07□□□□□ -2.08
PRPF38A-203ENST00000487160 TMEM235A6NFC5 223 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 GNRH2O43555 120 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 MRPS14O60783 128 aaKnown RBP2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 C1QBP02746 253 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 HTR1AP08908 422 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 ZNF705DP0CH99 300 aaPredicted RBP2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 HTN3P15516 51 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 ZNF93P35789 620 aaPredicted RBP2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 CCL20P78556 96 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 Q8NDZ9 215 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 TXNDC17Q9BRA2 123 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 BANF2Q9H503 90 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 TMEM14BQ9NUH8 114 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 ABRACLQ9P1F3 81 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 TMEM56-RWDD3S4R434 201 aa2.06□□□□□ -2.08
PRPF38A-203ENST00000487160 TRBV7-1A0A0A6YYK4 115 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 OR2T8A6NH00 312 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 TMEM212A6NML5 194 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 E7EUB6 86 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 J3QLW9 94 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 GNGT2O14610 69 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 LEPROTO15243 131 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 CRYZL1O95825 349 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 NPYP01303 97 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 FABP1P07148 127 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 RPSAP08865 295 aaKnown RBP2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 OR4E1P0C645 316 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 SAA1P0DJI8 122 aaPredicted RBP2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 EMP1P54849 157 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 TAS2R20P59543 309 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 DEFB131AP59861 70 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 MIAQ16674 131 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 RTL8BQ17RB0 113 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 VMA21Q3ZAQ7 101 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 C12orf73Q69YU5 71 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 FAM24BQ8N5W8 94 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 GDPD1Q8N9F7 314 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 C15orf53Q8NAA6 179 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 OR5AK2Q8NH90 309 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 CMSS1Q9BQ75 279 aaKnown RBP2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 ENY2Q9NPA8 101 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 TMEM138Q9NPI0 162 aa2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 RSL24D1Q9UHA3 163 aaKnown RBP2.05□□□□□ -2.08
PRPF38A-203ENST00000487160 FUT9Q9Y231 359 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms