RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 PDZD2O15018 2839 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 MAP1AP78559 2803 aaPredicted RBP5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 MXRA5Q9NR99 2828 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 TRAV25A0A0B4J276 109 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 H3BRM9 83 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 PTTG1IPP53801 180 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 RHOHQ15669 191 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 NSUN5P1Q3KNT7 163 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 TRPT1Q86TN4 253 aaKnown RBP5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 PCP2Q8IVA1 136 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 BAALCQ8WXS3 180 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 SPAG8Q99932 426 aaPredicted RBP5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 CHTOPQ9Y3Y2 248 aaKnown RBP5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZFHX3Q15911 3703 aa5.19□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZANQ9Y493 2812 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 IGKV2D-26A0A0A0MRZ7 120 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 H3BMM0 161 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZNF561-AS1K7EIQ3 104 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 M0QY20 66 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 CCL25O15444 150 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 CRYGDP07320 174 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 FHL3Q13643 280 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 SPINK13Q1W4C9 94 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZFP2Q6ZN57 461 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 OR11H1Q8NG94 326 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 DUX5Q96PT3 197 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 CHAC1Q9BUX1 264 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 TM2D2Q9BX73 214 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 TMEM160Q9NX00 188 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 SPG11Q96JI7 2443 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 NOTCH2Q04721 2471 aa5.18□□□□□ -1.58
SMARCAL1-212ENST00000486983 CSMD2Q7Z408 3487 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 MYO9AB2RTY4 2548 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 TRBV25-1A0A075B6N4 114 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 TRAV12-2A0A075B6T6 113 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 SDHAF1A6NFY7 115 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 IGIPA6NJ69 53 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 OR11H12B2RN74 326 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 E9PLD3 99 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 K7EP13 123 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 SCGB2A2Q13296 93 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 VAMP3Q15836 100 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 Q6ZSV7 163 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 GTSCR1Q86UQ5 136 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 OR11H2Q8NH07 326 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 MDFICQ9P1T7 246 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 TP53TG1Q9Y2A0 90 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 CR1P17927 2039 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 APCP25054 2843 aa5.17□□□□□ -1.58
SMARCAL1-212ENST00000486983 A0A087WWL8 130 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 DNAJC9-AS1A6NH13 148 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 PRSS29PA6NIE9 313 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 A8MWV9 139 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 SPRY2O43597 315 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 IGKV3-20P01619 116 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 DEFB131AP59861 70 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZNF415Q09FC8 603 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 PMVKQ15126 192 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZNF56Q15929 161 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 DEFB114Q30KQ6 69 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 ZNF876PQ49A33 203 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 MORN3Q6PF18 240 aaPredicted RBP5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 TMEM61Q8N0U2 210 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 KLHL30-AS1Q8NEE0 82 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 DYNLRB2Q8TF09 96 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 JPT2Q9H910 190 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 MAP6D1Q9H9H5 199 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 SELENOKQ9Y6D0 94 aa5.16□□□□□ -1.58
SMARCAL1-212ENST00000486983 POLQO75417 2590 aa5.15□□□□□ -1.58
SMARCAL1-212ENST00000486983 IGLV4-69A0A075B6H9 119 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 MYMXA0A1B0GTQ4 84 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 C11orf86A6NJI1 115 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 F5H697 171 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 I3L3M4 83 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 M0R2P5 195 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 RHODO00212 210 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 TSHBP01222 138 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 INSP01308 110 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 RBMY1A1P0DJD3 496 aaKnown RBP5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 RBMY1CP0DJD4 496 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 CRYBA4P53673 196 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 HERVK_113P61574 105 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 RBMY1FQ15415 496 aaKnown RBP5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 DEFB136Q30KP8 78 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 FAM74A4Q5TZK3 123 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 UFSP1Q6NVU6 142 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 C18orf65Q6ZTR6 163 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 Q6ZVH6 145 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 GTF2H5Q6ZYL4 71 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 CEND1Q8N111 149 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 WFDC11Q8NEX6 87 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 OR4C5Q8NGB2 326 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 DLX4Q92988 240 aaPredicted RBP5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 RAX2Q96IS3 184 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 SPXQ9BT56 116 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 C16orf95Q9H693 158 aa5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 TEP1Q99973 2627 aaKnown RBP5.15□□□□□ -1.59
SMARCAL1-212ENST00000486983 TRAV8-6A0A0B4J262 113 aa5.14□□□□□ -1.59
SMARCAL1-212ENST00000486983 RBMY1BA6NDE4 496 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms