RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 ZNF493Q6ZR52 646 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 TMEM136Q6ZRR5 245 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 TRAPPC1Q9Y5R8 145 aa4.29□□□□□ -1.72
USP41-204ENST00000486536 IGHV3-16A0A0C4DH30 117 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 KIR2DL5BA0A0G2JN68 375 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 KIR2DL5BA0A0G2JPC4 375 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 H3BVH4 76 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 PHOX2AO14813 284 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 GNRH2O43555 120 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 CFC1BP0CG36 223 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 CFC1P0CG37 223 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 RBMY1A1P0DJD3 496 aaKnown RBP4.28□□□□□ -1.72
USP41-204ENST00000486536 RBMY1CP0DJD4 496 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 RNASE3P12724 160 aaKnown RBP4.28□□□□□ -1.72
USP41-204ENST00000486536 NTF3P20783 257 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 FXYD7P58549 80 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 SEC61GP60059 68 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 RAB4BP61018 213 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 FABP9Q0Z7S8 132 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 RBMY1FQ15415 496 aaKnown RBP4.28□□□□□ -1.72
USP41-204ENST00000486536 SPANXN1Q5VSR9 72 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 SMIM15Q7Z3B0 74 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 KIR2DL5AQ8N109 375 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 ZFP82Q8N141 532 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 LINC01561Q8N1V8 128 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 DEFB125Q8N687 156 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 Q8NBF4 154 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 KIR2DL5BQ8NHK3 375 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 FRZBQ92765 325 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 PTH2Q96A98 100 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 C9orf85Q96MD7 179 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 LINC01587Q99440 93 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 TMEM191AQ9H0A3 160 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 GOLT1BQ9Y3E0 138 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 PHLDA3Q9Y5J5 127 aa4.28□□□□□ -1.72
USP41-204ENST00000486536 LOC102724200A0A096LPH7 203 aaPredicted RBP4.27□□□□□ -1.73
USP41-204ENST00000486536 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
USP41-204ENST00000486536 APCSP02743 223 aa4.27□□□□□ -1.73
USP41-204ENST00000486536 GIG44P09565 113 aaPredicted RBP4.27□□□□□ -1.73
USP41-204ENST00000486536 TRGC1P0CF51 173 aa4.27□□□□□ -1.73
USP41-204ENST00000486536 APOC4P55056 127 aa4.27□□□□□ -1.73
USP41-204ENST00000486536 C1orf158Q8N1D5 194 aa4.27□□□□□ -1.73
USP41-204ENST00000486536 TMEM208Q9BTX3 173 aa4.27□□□□□ -1.73
USP41-204ENST00000486536 WFDC10AQ9H1F0 79 aa4.27□□□□□ -1.73
USP41-204ENST00000486536 XCL2Q9UBD3 114 aa4.27□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BKO60814 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BJP06899 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BOP23527 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 SLAQ13239 276 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
USP41-204ENST00000486536 FAM104BQ5XKR9 115 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 ZNF705AQ6ZN79 300 aaPredicted RBP4.26□□□□□ -1.73
USP41-204ENST00000486536 CSNK1G2-AS1Q8NCQ2 148 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 OR10AG1Q8NH19 301 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 AP1S3Q96PC3 154 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 CHCHD5Q9BSY4 110 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 MDFICQ9P1T7 246 aa4.26□□□□□ -1.73
USP41-204ENST00000486536 SMIM9A6NGZ8 99 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 G3V4G9 280 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 M0R2P5 195 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 M0R381 172 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 PPBPP02775 128 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 S100A6P06703 90 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 KRTAP10-11P60412 298 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 Q0VG73 95 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 LAGE3Q14657 143 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 OR10J3Q5JRS4 329 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 COA6Q5JTJ3 125 aaKnown RBP4.25□□□□□ -1.73
USP41-204ENST00000486536 C11orf72Q8NBR9 251 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 TMEM263Q8WUH6 116 aaKnown RBP4.25□□□□□ -1.73
USP41-204ENST00000486536 C16orf74Q96GX8 76 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 DPH3P1Q9H4G8 78 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 JPT2Q9H910 190 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 LAMTOR2Q9Y2Q5 125 aa4.25□□□□□ -1.73
USP41-204ENST00000486536 TIMM8BQ9Y5J9 83 aaPredicted RBP4.25□□□□□ -1.73
USP41-204ENST00000486536 IGHV3OR16-12A0A075B7B8 117 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 MUC21A0A0G2JKD1 596 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 MUC21A0A140T8X8 626 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 RS1O15537 224 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 SMIM17P0DL12 118 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 HTN1P15515 57 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 RAB4AP20338 218 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 EVI2AP22794 236 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 SRIP30626 198 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 DAZ2Q13117 558 aaKnown RBP4.24□□□□□ -1.73
USP41-204ENST00000486536 RRN3P1Q2M238 152 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 LGALS9BQ3B8N2 356 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 MRPL51Q4U2R6 128 aaKnown RBP4.24□□□□□ -1.73
USP41-204ENST00000486536 AMN1Q8IY45 258 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 POM121L12Q8N7R1 296 aa4.24□□□□□ -1.73
USP41-204ENST00000486536 MRAP2Q96G30 205 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms