RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 LTBP2Q14767 1821 aa2.86□□□□□ -1.95
R3HDM1-217ENST00000486532 KIAA1549LQ6ZVL6 1849 aa2.86□□□□□ -1.95
R3HDM1-217ENST00000486532 MYOFQ9NZM1 2061 aa2.86□□□□□ -1.95
R3HDM1-217ENST00000486532 UBR3Q6ZT12 1888 aa2.86□□□□□ -1.95
R3HDM1-217ENST00000486532 CPAMD8Q8IZJ3 1885 aa2.86□□□□□ -1.95
R3HDM1-217ENST00000486532 ZNF407Q9C0G0 2248 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 PKD1L3Q7Z443 1732 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 IGLV11-55A0A075B6I3 123 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 TRBV7-3A0A075B6L6 115 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 IGKV1D-17A0A075B6S4 117 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 A0A0B4J2C4 111 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 IGHV5-51A0A0C4DH38 117 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 IGHV5-10-1A0A0J9YXX1 117 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 A8MU10 97 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 SH2D1AO60880 128 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 COX6CP09669 75 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 CD24P25063 80 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 XCL1P47992 114 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 DSCR4P56555 118 aaPredicted RBP2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 S100A7L2Q5SY68 101 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 ATP5EP2Q5VTU8 51 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 IGFL3Q6UXB1 125 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 ZNF826PQ6ZT77 177 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 ZNF414Q96IQ9 312 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 FAM167A-AS1Q96KT0 104 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 FAM103A1Q9BTL3 118 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 ZNF355PQ9NSJ1 428 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 PRR34Q9NV39 138 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 PRO1854Q9UHT4 67 aa2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 SETXQ7Z333 2677 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-217ENST00000486532 SPTBN5Q9NRC6 3674 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 MYO7AQ13402 2215 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 BDP1A6H8Y1 2624 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 ANKRD11Q6UB99 2663 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 SHROOM3Q8TF72 1996 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 MYMXA0A1B0GTQ4 84 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 IGHV1-46P01743 117 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 PRH1P02810 166 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 HMGN2P05204 90 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 FXYD2P54710 66 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 UBE2D3P61077 147 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 UBE2D2P62837 147 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 PPP1R1CQ8WVI7 109 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 C1orf147Q96MC9 270 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 RPP21Q9H633 154 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 ABRACLQ9P1F3 81 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 HILPDAQ9Y5L2 63 aa2.84□□□□□ -1.95
R3HDM1-217ENST00000486532 MUC6Q6W4X9 2439 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 TRAV7A0A075B6U4 112 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 LOC107984156A0A0G2JMH3 177 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 C2orf70A6NJV1 201 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 ERC2-IT1O76042 136 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 LY6HO94772 140 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 DNAH10OSP0CZ25 163 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 SYCNQ0VAF6 134 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 PLGLAQ15195 96 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 IL17AQ16552 155 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 C9orf116Q5BN46 136 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 ARL17AQ8IVW1 177 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 DEFB123Q8N688 67 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 ZNF525Q8N782 197 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 LIMD2Q9BT23 127 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 C14orf132Q9NPU4 83 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 LINC00474Q9P2X8 69 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 MPDZO75970 2070 aa2.83□□□□□ -1.96
R3HDM1-217ENST00000486532 ZDBF2Q9HCK1 2354 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 QSER1Q2KHR3 1735 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 MUC22E2RYF6 1773 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 IGHV3-73A0A0B4J1V6 119 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 IGHV1-3A0A0C4DH29 117 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 TRBV10-2A0A0K0K1G8 114 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 A6NED7 52 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 CEBPZOSA8MTT3 80 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 IGLV3-25P01717 112 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 CMC4P56277 68 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 SUPT4H1P63272 117 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 ATXN8Q156A1 80 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 Q6JHZ5 121 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 LYPD5Q6UWN5 251 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 CASC2Q6XLA1 102 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 NDUFA11Q86Y39 141 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 TIMM9Q9Y5J7 89 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 BAZ2BQ9UIF8 2168 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 GCC2Q8IWJ2 1684 aa2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 TNRC6CQ9HCJ0 1690 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 COL11A1P12107 1806 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-217ENST00000486532 MUC4Q99102 2169 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 TRBV25-1A0A075B6N4 114 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 HCG22E2RYF7 251 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 LECT2O14960 151 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 IGHV4-34P06331 123 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 CGB3P0DN86 165 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 CGB7P0DN87 165 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 IFI27P40305 119 aaPredicted RBP2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 C2orf83Q53S99 150 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 ZNF818PQ6ZRF7 136 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 LYZL2Q7Z4W2 148 aa2.81□□□□□ -1.96
R3HDM1-217ENST00000486532 Q8N6K4 173 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms