RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 C20orf203Q8NBC4 194 aa16.64■□□□□ 0.25
CLN5-202ENST00000485938 ZNF580Q9UK33 172 aa16.64■□□□□ 0.25
CLN5-202ENST00000485938 IGHV4-30-2A0A087WSY4 118 aa16.64■□□□□ 0.25
CLN5-202ENST00000485938 A0A1B0GV72 72 aa16.64■□□□□ 0.25
CLN5-202ENST00000485938 MSMBP08118 114 aa16.64■□□□□ 0.25
CLN5-202ENST00000485938 SNRPD3P62318 126 aaKnown RBP16.64■□□□□ 0.25
CLN5-202ENST00000485938 CCL19Q99731 98 aa16.64■□□□□ 0.25
CLN5-202ENST00000485938 K7EQG2 157 aa16.63■□□□□ 0.25
CLN5-202ENST00000485938 EIF4EBP3O60516 100 aaPredicted RBP16.62■□□□□ 0.25
CLN5-202ENST00000485938 ZNF22P17026 224 aaPredicted RBP16.62■□□□□ 0.25
CLN5-202ENST00000485938 SPINK13Q1W4C9 94 aa16.62■□□□□ 0.25
CLN5-202ENST00000485938 TCTEX1D4Q5JR98 221 aa16.62■□□□□ 0.25
CLN5-202ENST00000485938 A4D1N5 150 aa16.62■□□□□ 0.25
CLN5-202ENST00000485938 AVPP01185 164 aa16.62■□□□□ 0.25
CLN5-202ENST00000485938 I3L3M4 83 aa16.61■□□□□ 0.25
CLN5-202ENST00000485938 RHODO00212 210 aa16.61■□□□□ 0.25
CLN5-202ENST00000485938 C10orf99Q6UWK7 81 aa16.61■□□□□ 0.25
CLN5-202ENST00000485938 A8MWV9 139 aa16.61■□□□□ 0.25
CLN5-202ENST00000485938 SCGB1C2P0DMR2 95 aa16.61■□□□□ 0.25
CLN5-202ENST00000485938 IGSF10Q6WRI0 2623 aa16.6■□□□□ 0.25
CLN5-202ENST00000485938 TGFAP01135 160 aa16.6■□□□□ 0.25
CLN5-202ENST00000485938 ACACBO00763 2458 aa16.6■□□□□ 0.25
CLN5-202ENST00000485938 IGLV4-3A0A075B6K6 122 aa16.59■□□□□ 0.25
CLN5-202ENST00000485938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLN5-202ENST00000485938 A0A0J9YXV3 536 aa16.59■□□□□ 0.25
CLN5-202ENST00000485938 TMEM263Q8WUH6 116 aaKnown RBP16.59■□□□□ 0.25
CLN5-202ENST00000485938 IGHV3-64A0A075B6Q5 118 aa16.58■□□□□ 0.25
CLN5-202ENST00000485938 IGHV3-33P01772 117 aa16.58■□□□□ 0.25
CLN5-202ENST00000485938 ATP5J2P56134 94 aa16.58■□□□□ 0.25
CLN5-202ENST00000485938 RAX2Q96IS3 184 aa16.58■□□□□ 0.25
CLN5-202ENST00000485938 CRYBA4P53673 196 aa16.58■□□□□ 0.24
CLN5-202ENST00000485938 VCX2Q9H322 139 aa16.58■□□□□ 0.24
CLN5-202ENST00000485938 CKS1BP61024 79 aa16.57■□□□□ 0.24
CLN5-202ENST00000485938 TRAV2A0A0B4J234 112 aa16.57■□□□□ 0.24
CLN5-202ENST00000485938 MUSTN1Q8IVN3 82 aa16.57■□□□□ 0.24
CLN5-202ENST00000485938 ANKRD29Q8N6D5 301 aa16.57■□□□□ 0.24
CLN5-202ENST00000485938 A0A0B4J2C4 111 aa16.56■□□□□ 0.24
CLN5-202ENST00000485938 MT-ATP8P03928 68 aa16.56■□□□□ 0.24
CLN5-202ENST00000485938 SPINK8P0C7L1 97 aa16.56■□□□□ 0.24
CLN5-202ENST00000485938 Q6ZUT4 128 aa16.56■□□□□ 0.24
CLN5-202ENST00000485938 MAP1AP78559 2803 aaPredicted RBP16.56■□□□□ 0.24
CLN5-202ENST00000485938 XGP55808 180 aa16.56■□□□□ 0.24
CLN5-202ENST00000485938 IGHV4-59P01825 116 aa16.55■□□□□ 0.24
CLN5-202ENST00000485938 RNF152Q8N8N0 203 aa16.55■□□□□ 0.24
CLN5-202ENST00000485938 M0R2P5 195 aa16.54■□□□□ 0.24
CLN5-202ENST00000485938 CSPG4Q6UVK1 2322 aa16.54■□□□□ 0.24
CLN5-202ENST00000485938 DOPEY2Q9Y3R5 2298 aa16.54■□□□□ 0.24
CLN5-202ENST00000485938 TRGV11A0A075B6L2 103 aa16.54■□□□□ 0.24
CLN5-202ENST00000485938 TMEM89A2RUT3 159 aa16.54■□□□□ 0.24
CLN5-202ENST00000485938 SYNJ2BPP57105 145 aa16.54■□□□□ 0.24
CLN5-202ENST00000485938 ERG28Q9UKR5 140 aa16.54■□□□□ 0.24
CLN5-202ENST00000485938 SPG11Q96JI7 2443 aa16.54■□□□□ 0.24
CLN5-202ENST00000485938 FAM104AQ969W3 186 aa16.53■□□□□ 0.24
CLN5-202ENST00000485938 B4DSR2 109 aa16.53■□□□□ 0.24
CLN5-202ENST00000485938 SORL1Q92673 2214 aa16.52■□□□□ 0.24
CLN5-202ENST00000485938 A0A0J9YXY3 114 aa16.52■□□□□ 0.24
CLN5-202ENST00000485938 PYGO1Q9Y3Y4 419 aa16.52■□□□□ 0.24
CLN5-202ENST00000485938 FLNCQ14315 2725 aa16.52■□□□□ 0.24
CLN5-202ENST00000485938 M0QXV9 152 aa16.52■□□□□ 0.23
CLN5-202ENST00000485938 SLC25A20O43772 301 aa16.52■□□□□ 0.23
CLN5-202ENST00000485938 DEFB112Q30KQ8 113 aa16.52■□□□□ 0.23
CLN5-202ENST00000485938 EDA2RQ9HAV5 297 aa16.52■□□□□ 0.23
CLN5-202ENST00000485938 RBMY1A1P0DJD3 496 aaKnown RBP16.51■□□□□ 0.23
CLN5-202ENST00000485938 RBMY1CP0DJD4 496 aa16.51■□□□□ 0.23
CLN5-202ENST00000485938 IGHV3-30-3P0DP02 117 aa16.51■□□□□ 0.23
CLN5-202ENST00000485938 RBMY1FQ15415 496 aaKnown RBP16.51■□□□□ 0.23
CLN5-202ENST00000485938 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.51■□□□□ 0.23
CLN5-202ENST00000485938 C9JAW5 83 aa16.51■□□□□ 0.23
CLN5-202ENST00000485938 H7C2G1 150 aa16.51■□□□□ 0.23
CLN5-202ENST00000485938 CD28P10747 220 aa16.5■□□□□ 0.23
CLN5-202ENST00000485938 SPXQ9BT56 116 aa16.5■□□□□ 0.23
CLN5-202ENST00000485938 MRPS36P82909 103 aaKnown RBP16.49■□□□□ 0.23
CLN5-202ENST00000485938 LITAFQ99732 161 aa16.49■□□□□ 0.23
CLN5-202ENST00000485938 CELSR2Q9HCU4 2923 aa16.49■□□□□ 0.23
CLN5-202ENST00000485938 DUX5Q96PT3 197 aa16.48■□□□□ 0.23
CLN5-202ENST00000485938 TIMM21Q9BVV7 248 aa16.48■□□□□ 0.23
CLN5-202ENST00000485938 IGHV3-73A0A0B4J1V6 119 aa16.48■□□□□ 0.23
CLN5-202ENST00000485938 UTP20O75691 2785 aaKnown RBP16.48■□□□□ 0.23
CLN5-202ENST00000485938 ADARB2-AS1A8MUL3 147 aa16.47■□□□□ 0.23
CLN5-202ENST00000485938 ELANEP08246 267 aa16.47■□□□□ 0.23
CLN5-202ENST00000485938 PROK1P58294 105 aa16.47■□□□□ 0.23
CLN5-202ENST00000485938 GATA3P23771 443 aa16.47■□□□□ 0.23
CLN5-202ENST00000485938 ZFYVE26Q68DK2 2539 aa16.47■□□□□ 0.23
CLN5-202ENST00000485938 CEMP1Q6PRD7 247 aaPredicted RBP16.46■□□□□ 0.23
CLN5-202ENST00000485938 GEMIN7Q9H840 131 aaKnown RBP16.46■□□□□ 0.23
CLN5-202ENST00000485938 HOXD3P31249 432 aaPredicted RBP16.46■□□□□ 0.23
CLN5-202ENST00000485938 USP24Q9UPU5 2620 aa16.45■□□□□ 0.22
CLN5-202ENST00000485938 TRAV8-3A0A0A6YYJ7 113 aa16.45■□□□□ 0.22
CLN5-202ENST00000485938 Q1RN00 199 aa16.45■□□□□ 0.22
CLN5-202ENST00000485938 CRYBG3Q68DQ2 2970 aa16.45■□□□□ 0.22
CLN5-202ENST00000485938 HTN1P15515 57 aa16.45■□□□□ 0.22
CLN5-202ENST00000485938 USP9XQ93008 2570 aaPredicted RBP16.44■□□□□ 0.22
CLN5-202ENST00000485938 KNCNA6PVL3 124 aa16.44■□□□□ 0.22
CLN5-202ENST00000485938 TMEM262E9PQX1 116 aa16.44■□□□□ 0.22
CLN5-202ENST00000485938 ATXN8Q156A1 80 aa16.44■□□□□ 0.22
CLN5-202ENST00000485938 TNFRSF18Q9Y5U5 241 aa16.44■□□□□ 0.22
CLN5-202ENST00000485938 PRRC2AP48634 2157 aaKnown RBP16.43■□□□□ 0.22
CLN5-202ENST00000485938 IGHV1-58A0A0C4DH39 117 aa16.43■□□□□ 0.22
CLN5-202ENST00000485938 PRB1P04280 392 aa16.43■□□□□ 0.22
CLN5-202ENST00000485938 RNASE13Q5GAN3 156 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms