RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 H3BSH0 61 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 H7C423 109 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 LECT2O14960 151 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 XCL1P47992 114 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 IGLV3-21P80748 117 aaPredicted RBP3.07□□□□□ -1.92
RTN4-213ENST00000485749 SDIM1Q6ZPB5 146 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 LYPD6Q86Y78 171 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 RPP21Q9H633 154 aaKnown RBP3.07□□□□□ -1.92
RTN4-213ENST00000485749 LINC00474Q9P2X8 69 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 ICOSQ9Y6W8 199 aa3.07□□□□□ -1.92
RTN4-213ENST00000485749 IGKV2D-26A0A0A0MRZ7 120 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 A0A1B0GVX0 72 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 C19orf71A6NCJ1 209 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 C11orf94C9JXX5 98 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 H3BMM0 161 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 CRPP02741 224 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 IL4P05112 153 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 RPS27P42677 84 aaKnown RBP3.06□□□□□ -1.92
RTN4-213ENST00000485749 EFNA4P52798 201 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 FXYD2P54710 66 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 LYZP61626 148 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 POLEQ07864 2286 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 C2orf91Q6ZV80 131 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 LYZL2Q7Z4W2 148 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 Q8N814 137 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 CYB561D1Q8N8Q1 229 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 UBE2WQ96B02 151 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 ARHGAP5-AS1Q96IT6 56 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 C14orf132Q9NPU4 83 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 SMAD5-AS1Q9Y6J3 95 aa3.06□□□□□ -1.92
RTN4-213ENST00000485749 DOCK8Q8NF50 2099 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 A0A0B4J2C4 111 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 TMEM223A0PJW6 202 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 IGKV3-20P01619 116 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 CD24P25063 80 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 GCHFRP30047 84 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 NNATQ16517 81 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 C9orf116Q5BN46 136 aaPredicted RBP3.05□□□□□ -1.92
RTN4-213ENST00000485749 ADM2Q7Z4H4 148 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 DYNAPQ8N1N2 210 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 C14orf178Q8N769 122 aaPredicted RBP3.05□□□□□ -1.92
RTN4-213ENST00000485749 LINC01006Q8NI28 216 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 FAM103A1Q9BTL3 118 aaKnown RBP3.05□□□□□ -1.92
RTN4-213ENST00000485749 ZNF355PQ9NSJ1 428 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 ZNRD1Q9P1U0 126 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 PRO1854Q9UHT4 67 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 HILPDAQ9Y5L2 63 aa3.05□□□□□ -1.92
RTN4-213ENST00000485749 CCDC88CQ9P219 2028 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 TRAV7A0A075B6U4 112 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 TRBV7-1A0A0A6YYK4 115 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 TRBV10-2A0A0K0K1G8 114 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 PINLYPA6NC86 204 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 A6NDX4 124 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 H7BZZ5 65 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 IGHV4-34P06331 123 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 MGST1P10620 155 aaKnown RBP3.04□□□□□ -1.92
RTN4-213ENST00000485749 SYCNQ0VAF6 134 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 KLKP1Q107X0 134 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 FAM19A2Q8N3H0 131 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 Q8N9W7 124 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 LINC01560Q8TB33 94 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 U3KQK5 164 aa3.04□□□□□ -1.92
RTN4-213ENST00000485749 HELZP42694 1942 aaKnown RBP3.03□□□□□ -1.92
RTN4-213ENST00000485749 COL4A2P08572 1712 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 IGLV3-12A0A075B6K2 115 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 IGHV3-15A0A0B4J1V0 119 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 C5orf67F2Z3F1 127 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 IGLV1-51P01701 117 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 CLPSP04118 112 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 COX6CP09669 75 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 TLX1NBP0CAT3 122 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 SERF2P84101 59 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 KRTAP24-1Q3LI83 254 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 C1orf134Q5TEV5 83 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 VMO1Q7Z5L0 202 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 Q8IYB0 196 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 MIR7-3HGQ8N6C7 128 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 CIRBP-AS1Q8TBR5 109 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 C16orf74Q96GX8 76 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 PIKFYVEQ9Y2I7 2098 aa3.03□□□□□ -1.92
RTN4-213ENST00000485749 ANAPC1Q9H1A4 1944 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.02□□□□□ -1.93
RTN4-213ENST00000485749 H3BPC8 53 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 H3BVH4 76 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 H7C2G1 150 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 IGKV3-11P04433 115 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 PRB4P10163 310 aaPredicted RBP3.02□□□□□ -1.93
RTN4-213ENST00000485749 DSCR4P56555 118 aaPredicted RBP3.02□□□□□ -1.93
RTN4-213ENST00000485749 EDDM3BP56851 147 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 FXYD4P59646 89 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 ROMO1P60602 79 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 DEFB103AP81534 67 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 SPANXN5Q5MJ07 72 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 FAM27BQ5VT28 67 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 LYZL1Q6UWQ5 148 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 ZNF818PQ6ZRF7 136 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 CYSTM1Q9H1C7 97 aa3.02□□□□□ -1.93
RTN4-213ENST00000485749 CDC42SE1Q9NRR8 79 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms