RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 OR10G8Q8NGN5 311 aa11.27□□□□□ -0.61
SMC4-216ENST00000485645 TMEM262E9PQX1 116 aa11.26□□□□□ -0.61
SMC4-216ENST00000485645 PDE6DO43924 150 aa11.26□□□□□ -0.61
SMC4-216ENST00000485645 BCL2P10415 239 aa11.26□□□□□ -0.61
SMC4-216ENST00000485645 TAGLN2P37802 199 aaKnown RBP11.26□□□□□ -0.61
SMC4-216ENST00000485645 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
SMC4-216ENST00000485645 Q0VG73 95 aa11.26□□□□□ -0.61
SMC4-216ENST00000485645 ZNF56Q15929 161 aa11.26□□□□□ -0.61
SMC4-216ENST00000485645 LINC01620Q4KN68 170 aa11.26□□□□□ -0.61
SMC4-216ENST00000485645 DERL1Q9BUN8 251 aa11.26□□□□□ -0.61
SMC4-216ENST00000485645 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
SMC4-216ENST00000485645 TRBV6-8A0A0A6YYG3 113 aa11.25□□□□□ -0.61
SMC4-216ENST00000485645 CXCL1P09341 107 aa11.25□□□□□ -0.61
SMC4-216ENST00000485645 BLOC1S1P78537 153 aa11.25□□□□□ -0.61
SMC4-216ENST00000485645 ATRAIDQ6UW56 229 aa11.25□□□□□ -0.61
SMC4-216ENST00000485645 LINC00528Q8N1L1 170 aa11.25□□□□□ -0.61
SMC4-216ENST00000485645 OR10AG1Q8NH19 301 aa11.25□□□□□ -0.61
SMC4-216ENST00000485645 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.24□□□□□ -0.61
SMC4-216ENST00000485645 NEXN-AS1Q8NBZ9 246 aa11.24□□□□□ -0.61
SMC4-216ENST00000485645 J3QL48 77 aa11.23□□□□□ -0.61
SMC4-216ENST00000485645 SNAI2O43623 268 aa11.23□□□□□ -0.61
SMC4-216ENST00000485645 CENPWQ5EE01 88 aa11.23□□□□□ -0.61
SMC4-216ENST00000485645 SPANXN1Q5VSR9 72 aa11.23□□□□□ -0.61
SMC4-216ENST00000485645 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
SMC4-216ENST00000485645 LYPD6BQ8NI32 183 aa11.23□□□□□ -0.61
SMC4-216ENST00000485645 SSBP4Q9BWG4 385 aaPredicted RBP11.23□□□□□ -0.61
SMC4-216ENST00000485645 C1orf43Q9BWL3 253 aa11.23□□□□□ -0.61
SMC4-216ENST00000485645 F5H697 171 aa11.22□□□□□ -0.61
SMC4-216ENST00000485645 CRPP02741 224 aa11.22□□□□□ -0.61
SMC4-216ENST00000485645 OR5AL1P0C617 328 aa11.22□□□□□ -0.61
SMC4-216ENST00000485645 SCXQ7RTU7 201 aa11.22□□□□□ -0.61
SMC4-216ENST00000485645 SMIM12Q96EX1 92 aa11.22□□□□□ -0.61
SMC4-216ENST00000485645 MED9Q9NWA0 146 aa11.22□□□□□ -0.61
SMC4-216ENST00000485645 MUC21A0A0G2JKD1 596 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 MUC21A0A140T8X8 626 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 RAB19A4D1S5 217 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 IGLV2-8P01709 118 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 GNG4P50150 75 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 SSTP61278 116 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 C14orf177Q52M58 125 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 MPV17L2Q567V2 206 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 ENHOQ6UWT2 76 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 C15orf54Q8N8G6 183 aa11.21□□□□□ -0.61
SMC4-216ENST00000485645 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
SMC4-216ENST00000485645 SMIM17P0DL12 118 aa11.2□□□□□ -0.62
SMC4-216ENST00000485645 PKIAP61925 76 aa11.2□□□□□ -0.62
SMC4-216ENST00000485645 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
SMC4-216ENST00000485645 CHCHD5Q9BSY4 110 aa11.2□□□□□ -0.62
SMC4-216ENST00000485645 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
SMC4-216ENST00000485645 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
SMC4-216ENST00000485645 TMEM97Q5BJF2 176 aa11.19□□□□□ -0.62
SMC4-216ENST00000485645 AP1S3Q96PC3 154 aa11.18□□□□□ -0.62
SMC4-216ENST00000485645 DAZAP1Q96EP5 407 aaKnown RBP11.17□□□□□ -0.62
SMC4-216ENST00000485645 BIN3Q9NQY0 253 aa11.17□□□□□ -0.62
SMC4-216ENST00000485645 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
SMC4-216ENST00000485645 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
SMC4-216ENST00000485645 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
SMC4-216ENST00000485645 TMEM250H0YL14 139 aa11.16□□□□□ -0.62
SMC4-216ENST00000485645 MIAQ16674 131 aa11.16□□□□□ -0.62
SMC4-216ENST00000485645 NTM-AS1Q6ZSK4 140 aa11.16□□□□□ -0.62
SMC4-216ENST00000485645 CIRBP-AS1Q8TBR5 109 aa11.16□□□□□ -0.62
SMC4-216ENST00000485645 TRBV25-1A0A075B6N4 114 aa11.15□□□□□ -0.62
SMC4-216ENST00000485645 HLA-DQA1P01909 254 aa11.15□□□□□ -0.62
SMC4-216ENST00000485645 TPPP3Q9BW30 176 aa11.15□□□□□ -0.62
SMC4-216ENST00000485645 USP17L23D6RBM5 183 aa11.14□□□□□ -0.63
SMC4-216ENST00000485645 RPS20P60866 119 aaKnown RBP11.14□□□□□ -0.63
SMC4-216ENST00000485645 GAGE6Q13070 117 aa11.14□□□□□ -0.63
SMC4-216ENST00000485645 OR2D3Q8NGH3 330 aa11.14□□□□□ -0.63
SMC4-216ENST00000485645 NDUFS6O75380 124 aaKnown RBP11.13□□□□□ -0.63
SMC4-216ENST00000485645 P01737 135 aa11.13□□□□□ -0.63
SMC4-216ENST00000485645 GZMBP10144 247 aa11.13□□□□□ -0.63
SMC4-216ENST00000485645 RBX1P62877 108 aa11.13□□□□□ -0.63
SMC4-216ENST00000485645 FER1L6-AS1Q8NA97 138 aa11.13□□□□□ -0.63
SMC4-216ENST00000485645 PRR34Q9NV39 138 aa11.13□□□□□ -0.63
SMC4-216ENST00000485645 XKRY2A2RUG3 117 aa11.12□□□□□ -0.63
SMC4-216ENST00000485645 H7C1H1 209 aa11.12□□□□□ -0.63
SMC4-216ENST00000485645 MGPP08493 103 aa11.12□□□□□ -0.63
SMC4-216ENST00000485645 IGLC6P0CF74 106 aa11.12□□□□□ -0.63
SMC4-216ENST00000485645 CLPSL2Q6UWE3 100 aa11.12□□□□□ -0.63
SMC4-216ENST00000485645 LINC00269Q8N2A0 174 aa11.12□□□□□ -0.63
SMC4-216ENST00000485645 OCC1Q8TAD7 63 aa11.12□□□□□ -0.63
SMC4-216ENST00000485645 FAM210AQ96ND0 272 aa11.12□□□□□ -0.63
SMC4-216ENST00000485645 EIF5A2Q9GZV4 153 aaKnown RBP11.12□□□□□ -0.63
SMC4-216ENST00000485645 IGHV1-24A0A0C4DH33 117 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 K7EN84 100 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 M0QY20 66 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 PRSS1P07477 247 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 KRTAP10-4P60372 401 aaPredicted RBP11.11□□□□□ -0.63
SMC4-216ENST00000485645 CACNG7P62955 275 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 IQCJQ1A5X6 159 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 TEX261Q6UWH6 196 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 NUDT11Q96G61 164 aa11.11□□□□□ -0.63
SMC4-216ENST00000485645 F2Z2F3 143 aa11.09□□□□□ -0.63
SMC4-216ENST00000485645 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
SMC4-216ENST00000485645 LRP1Q07954 4544 aaKnown RBP11.08□□□□□ -0.63
SMC4-216ENST00000485645 CEBPGP53567 150 aa11.08□□□□□ -0.64
SMC4-216ENST00000485645 REG3AQ06141 175 aa11.08□□□□□ -0.64
SMC4-216ENST00000485645 KRTAP26-1Q6PEX3 210 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms