RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ZNF415Q09FC8 603 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 LAGE3Q14657 143 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 RBMY1FQ15415 496 aaKnown RBP3.93□□□□□ -1.78
COL17A1-206ENST00000483876 LGALS9BQ3B8N2 356 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 ORMDL2Q53FV1 153 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 C1orf158Q8N1D5 194 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 ZNF664Q8N3J9 261 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 C11orf72Q8NBR9 251 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 SMIM2Q9BVW6 85 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 TIMM8BQ9Y5J9 83 aaPredicted RBP3.93□□□□□ -1.78
COL17A1-206ENST00000483876 AGRNO00468 2067 aa3.93□□□□□ -1.78
COL17A1-206ENST00000483876 MUC4Q99102 2169 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 TRAV9-2A0A087WT02 112 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 TRBV27A0A0K0K1C4 114 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 M0QY20 66 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 RHODO00212 210 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 ATP5LO75964 103 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 GAS8-AS1O95177 125 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 NCR2O95944 276 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 GIG44P09565 113 aaPredicted RBP3.92□□□□□ -1.78
COL17A1-206ENST00000483876 FXYD7P58549 80 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 DAZ2Q13117 558 aaKnown RBP3.92□□□□□ -1.78
COL17A1-206ENST00000483876 ZNF124Q15973 351 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 LINC01545Q5VT33 79 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 UFSP1Q6NVU6 142 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 ZFP2Q6ZN57 461 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 ZNF705AQ6ZN79 300 aaPredicted RBP3.92□□□□□ -1.78
COL17A1-206ENST00000483876 GTSCR1Q86UQ5 136 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 CSNK1G2-AS1Q8NCQ2 148 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 ST20Q9HBF5 79 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 GOLT1BQ9Y3E0 138 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 DNAH7Q8WXX0 4024 aa3.92□□□□□ -1.78
COL17A1-206ENST00000483876 TRAV26-2A0A0B4J265 109 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 KIR2DL5BA0A0G2JN68 375 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 KIR2DL5BA0A0G2JPC4 375 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 SMIM9A6NGZ8 99 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 F5H697 171 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 RS1O15537 224 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 GATA1P15976 413 aaPredicted RBP3.91□□□□□ -1.78
COL17A1-206ENST00000483876 LGALS9CQ6DKI2 356 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 SUMO4Q6EEV6 95 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 CDPF1Q6NVV7 123 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 KIR2DL5AQ8N109 375 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 KIR2DL5BQ8NHK3 375 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 IL17DQ8TAD2 202 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 RNASE8Q8TDE3 154 aaKnown RBP3.91□□□□□ -1.78
COL17A1-206ENST00000483876 TMEM263Q8WUH6 116 aaKnown RBP3.91□□□□□ -1.78
COL17A1-206ENST00000483876 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 DNAJC30Q96LL9 226 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 OVOL2Q9BRP0 275 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 TMEM208Q9BTX3 173 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 VAMP8Q9BV40 100 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 CSTL1Q9H114 145 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 XCL2Q9UBD3 114 aa3.91□□□□□ -1.78
COL17A1-206ENST00000483876 ZMAT5Q9UDW3 170 aaKnown RBP3.91□□□□□ -1.78
COL17A1-206ENST00000483876 A0A087WWL8 130 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 PCP4L1A6NKN8 68 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 SPRY2O43597 315 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 IGHV3-53P01767 116 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 MGPP08493 103 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 HTN1P15515 57 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 IGLL1P15814 213 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 DDTP30046 118 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 KRTAP10-11P60412 298 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 CFAP126Q5VTH2 177 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 LINC00173Q6ZV60 143 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 TOMM6Q96B49 74 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 C16orf74Q96GX8 76 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 KIR2DL4Q99706 377 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 MIEN1Q9BRT3 115 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 ZMAT4Q9H898 229 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 JPT2Q9H910 190 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 STARD9Q9P2P6 4700 aa3.9□□□□□ -1.79
COL17A1-206ENST00000483876 TRAV12-1A0A0B4J245 112 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 TRBV10-1A0A0K0K1A3 114 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 SDHAF1A6NFY7 115 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.89□□□□□ -1.79
COL17A1-206ENST00000483876 I3L3M4 83 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 NUDT3O95989 172 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 NPSP0C0P6 89 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 AZU1P20160 251 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 RHOHQ15669 191 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 ERASQ7Z444 233 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 MRPL52Q86TS9 123 aaKnown RBP3.89□□□□□ -1.79
COL17A1-206ENST00000483876 RPL39LQ96EH5 51 aaKnown RBP3.89□□□□□ -1.79
COL17A1-206ENST00000483876 TMEM141Q96I45 108 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 C18orf15Q96N68 181 aa3.89□□□□□ -1.79
COL17A1-206ENST00000483876 TRAV4A0A0B4J268 109 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 PLAC8L1A1L4L8 177 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 A8MZ25 164 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 LINC00587B1AMM8 73 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 HSBP1L1C9JCN9 74 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 LCE2BO14633 110 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 PRSS1P07477 247 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 IGLC3P0DOY3 106 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 CRYBA4P53673 196 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 APOC4P55056 127 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 ZNF56Q15929 161 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 RRN3P1Q2M238 152 aa3.88□□□□□ -1.79
COL17A1-206ENST00000483876 SPATA45Q537H7 98 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms