RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ZNF56Q15929 161 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 Q86TA4 180 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 ZFP82Q8N141 532 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 STPG4Q8N801 248 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 PPP1R1CQ8WVI7 109 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 RAB24Q969Q5 203 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 GFRA4Q9GZZ7 299 aa6.75□□□□□ -1.33
SMARCC1-205ENST00000483847 C15orf56Q8N910 161 aa6.74□□□□□ -1.33
SMARCC1-205ENST00000483847 C20orf203Q8NBC4 194 aa6.74□□□□□ -1.33
SMARCC1-205ENST00000483847 TRBV6-1A0A0K0K1D8 114 aa6.73□□□□□ -1.33
SMARCC1-205ENST00000483847 FAM240BA0A1B0GVZ2 78 aa6.73□□□□□ -1.33
SMARCC1-205ENST00000483847 MPC2O95563 127 aa6.73□□□□□ -1.33
SMARCC1-205ENST00000483847 DERL1Q9BUN8 251 aa6.73□□□□□ -1.33
SMARCC1-205ENST00000483847 NDUFA13Q9P0J0 144 aa6.73□□□□□ -1.33
SMARCC1-205ENST00000483847 VAX2Q9UIW0 290 aa6.73□□□□□ -1.33
SMARCC1-205ENST00000483847 TRBV25-1A0A075B6N4 114 aa6.72□□□□□ -1.33
SMARCC1-205ENST00000483847 A0A096LNI7 61 aa6.72□□□□□ -1.33
SMARCC1-205ENST00000483847 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-205ENST00000483847 CYCSP99999 105 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-205ENST00000483847 OR10AG1Q8NH19 301 aa6.72□□□□□ -1.33
SMARCC1-205ENST00000483847 TMEM167BQ9NRX6 74 aa6.72□□□□□ -1.33
SMARCC1-205ENST00000483847 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 PEX7O00628 323 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 IFNA7P01567 189 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 P01737 135 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 RPS10P46783 165 aaKnown RBP6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 DEFA3P59666 94 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 IQCJQ1A5X6 159 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 TMEM97Q5BJF2 176 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 FAM162BQ5T6X4 162 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 LCE2AQ5TA79 106 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 COX8CQ7Z4L0 72 aa6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 INO80EQ8NBZ0 244 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-205ENST00000483847 MUC21A0A140T8X8 626 aa6.7□□□□□ -1.34
SMARCC1-205ENST00000483847 A0A1W2PRE2 83 aa6.7□□□□□ -1.34
SMARCC1-205ENST00000483847 F5H697 171 aa6.7□□□□□ -1.34
SMARCC1-205ENST00000483847 H7C1H1 209 aa6.7□□□□□ -1.34
SMARCC1-205ENST00000483847 CXorf1O96002 111 aa6.7□□□□□ -1.34
SMARCC1-205ENST00000483847 UBE2G2P60604 165 aa6.7□□□□□ -1.34
SMARCC1-205ENST00000483847 ZNF674Q2M3X9 581 aa6.7□□□□□ -1.34
SMARCC1-205ENST00000483847 HIGD2BQ4VC39 106 aa6.7□□□□□ -1.34
SMARCC1-205ENST00000483847 IGHV1-24A0A0C4DH33 117 aa6.69□□□□□ -1.34
SMARCC1-205ENST00000483847 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 PET100P0DJ07 73 aa6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 GZMBP10144 247 aa6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 ATP6V0CP27449 155 aa6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 SSTP61278 116 aa6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 Q6ZRP5 223 aa6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 ANAPC16Q96DE5 110 aa6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 ZNF471Q9BX82 626 aaPredicted RBP6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 ZFP30Q9Y2G7 519 aa6.68□□□□□ -1.34
SMARCC1-205ENST00000483847 A0A1B0GUV1 79 aa6.67□□□□□ -1.34
SMARCC1-205ENST00000483847 ZNF726P1Q15940 193 aa6.67□□□□□ -1.34
SMARCC1-205ENST00000483847 MZT2BQ6NZ67 158 aa6.67□□□□□ -1.34
SMARCC1-205ENST00000483847 AQP10Q96PS8 301 aa6.67□□□□□ -1.34
SMARCC1-205ENST00000483847 PSMG3Q9BT73 122 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-205ENST00000483847 ACTR3CQ9C0K3 210 aaPredicted RBP6.67□□□□□ -1.34
SMARCC1-205ENST00000483847 FAM231BA6NCW3 169 aa6.66□□□□□ -1.34
SMARCC1-205ENST00000483847 FAM74A7A6NL05 159 aa6.66□□□□□ -1.34
SMARCC1-205ENST00000483847 SULT1A2P50226 295 aa6.66□□□□□ -1.34
SMARCC1-205ENST00000483847 HIST1H2BAQ96A08 127 aa6.66□□□□□ -1.34
SMARCC1-205ENST00000483847 CCDC32Q9BV29 185 aa6.66□□□□□ -1.34
SMARCC1-205ENST00000483847 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 IGKV3OR2-268A0A0C4DH90 116 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 M0QY20 66 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 SNAI2O43623 268 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 LTAP01374 205 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 MBP02144 154 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 UBE2G1P62253 170 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 CFAP161Q6P656 301 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 ENKURQ8TC29 256 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 FMC1Q96HJ9 113 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 TMEM243Q9BU79 118 aa6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 SSBP4Q9BWG4 385 aaPredicted RBP6.65□□□□□ -1.34
SMARCC1-205ENST00000483847 A0A0U1RQV1 116 aa6.64□□□□□ -1.35
SMARCC1-205ENST00000483847 SERF2P84101 59 aa6.64□□□□□ -1.35
SMARCC1-205ENST00000483847 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
SMARCC1-205ENST00000483847 PRR26Q8N8Z3 221 aa6.64□□□□□ -1.35
SMARCC1-205ENST00000483847 LINC00526Q96FQ7 95 aa6.64□□□□□ -1.35
SMARCC1-205ENST00000483847 TNFSF18Q9UNG2 199 aa6.64□□□□□ -1.35
SMARCC1-205ENST00000483847 INMT-MINDY4F8WBC2 141 aa6.63□□□□□ -1.35
SMARCC1-205ENST00000483847 SSNA1O43805 119 aa6.63□□□□□ -1.35
SMARCC1-205ENST00000483847 NKX2-5P52952 324 aaPredicted RBP6.63□□□□□ -1.35
SMARCC1-205ENST00000483847 SUMO4Q6EEV6 95 aa6.63□□□□□ -1.35
SMARCC1-205ENST00000483847 ZNF664Q8N3J9 261 aa6.63□□□□□ -1.35
SMARCC1-205ENST00000483847 LINC00474Q9P2X8 69 aa6.63□□□□□ -1.35
SMARCC1-205ENST00000483847 MGPP08493 103 aa6.62□□□□□ -1.35
SMARCC1-205ENST00000483847 CXCL1P09341 107 aa6.62□□□□□ -1.35
SMARCC1-205ENST00000483847 OR5AL1P0C617 328 aa6.62□□□□□ -1.35
SMARCC1-205ENST00000483847 SMIM17P0DL12 118 aa6.62□□□□□ -1.35
SMARCC1-205ENST00000483847 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-205ENST00000483847 AP1S3Q96PC3 154 aa6.62□□□□□ -1.35
SMARCC1-205ENST00000483847 NKX6-2Q9C056 277 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-205ENST00000483847 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
SMARCC1-205ENST00000483847 TRAV26-2A0A0B4J265 109 aa6.61□□□□□ -1.35
SMARCC1-205ENST00000483847 CTXND1A0A1B0GTU2 59 aa6.61□□□□□ -1.35
SMARCC1-205ENST00000483847 UBE2L6O14933 153 aa6.61□□□□□ -1.35
SMARCC1-205ENST00000483847 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms