RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 A0A0J9YWU9 116 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 TEX48A0A1B0GUV7 120 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 PRSS47A8MTI9 375 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 CIDEAO60543 219 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 PPBPP02775 128 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 SPART-AS1P0CW21 52 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 DEFB130BP0DP73 79 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 DEFB130AP0DP74 79 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 CKS2P33552 79 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 LINC00310P59036 64 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 FHL2Q14192 279 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 ZNF56Q15929 161 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 C12orf74Q32Q52 190 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 ORMDL3Q8N138 153 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 C18orf32Q8TCD1 76 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 PRELID3AQ96N28 172 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 FBN3Q75N90 2809 aa5.82□□□□□ -1.48
USP4-210ENST00000483212 TRBV6-5A0A0K0K1A5 114 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 TNFRSF6BO95407 300 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 HOXA5P20719 270 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 RAB5BP61020 215 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 Q0VG73 95 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 IQCJQ1A5X6 159 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 COA6Q5JTJ3 125 aaKnown RBP5.81□□□□□ -1.48
USP4-210ENST00000483212 RPL39LQ96EH5 51 aaKnown RBP5.81□□□□□ -1.48
USP4-210ENST00000483212 URB1-AS1Q96HZ7 61 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 ZMAT4Q9H898 229 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 Q9UF83 564 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 LAMTOR2Q9Y2Q5 125 aa5.81□□□□□ -1.48
USP4-210ENST00000483212 IGLV2-18A0A075B6J9 118 aa5.8□□□□□ -1.48
USP4-210ENST00000483212 F5H697 171 aa5.8□□□□□ -1.48
USP4-210ENST00000483212 P0DMU3 169 aa5.8□□□□□ -1.48
USP4-210ENST00000483212 FAM231AP0DMU4 169 aa5.8□□□□□ -1.48
USP4-210ENST00000483212 FAM231CP0DMU5 169 aa5.8□□□□□ -1.48
USP4-210ENST00000483212 DAD1P61803 113 aa5.8□□□□□ -1.48
USP4-210ENST00000483212 OR10J3Q5JRS4 329 aa5.8□□□□□ -1.48
USP4-210ENST00000483212 TRBV6-4A0A1B0GX49 114 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 K7EQD1 137 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 ATP5G1P05496 136 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 NHLRC4P0CG21 123 aaPredicted RBP5.79□□□□□ -1.48
USP4-210ENST00000483212 LINC00694P0DN24 101 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 POLR2KP53803 58 aaKnown RBP5.79□□□□□ -1.48
USP4-210ENST00000483212 RPL32P62910 135 aaKnown RBP5.79□□□□□ -1.48
USP4-210ENST00000483212 SLC25A29Q8N8R3 303 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 NEXN-AS1Q8NBZ9 246 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 C20orf78Q9BR46 151 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 NIT2Q9NQR4 276 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 TMA7Q9Y2S6 64 aaKnown RBP5.79□□□□□ -1.48
USP4-210ENST00000483212 STAB2Q8WWQ8 2551 aa5.79□□□□□ -1.48
USP4-210ENST00000483212 DYNC2H1Q8NCM8 4307 aaKnown RBP5.79□□□□□ -1.48
USP4-210ENST00000483212 TRGV4A0A0C4DH28 118 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 TRBV10-1A0A0K0K1A3 114 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 LOC100131303A0A0U1RQF7 123 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 LINC01546A6NGU7 62 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 H7C1H1 209 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 NUPR1O60356 82 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 PPP1R17O96001 155 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 ESDP10768 282 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 CRYBA4P53673 196 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 NANOS2P60321 138 aaKnown RBP5.78□□□□□ -1.48
USP4-210ENST00000483212 SUMO2P61956 95 aaKnown RBP5.78□□□□□ -1.48
USP4-210ENST00000483212 Q6ZTC4 211 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 C11orf45Q8TAV5 145 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 VSIG2Q96IQ7 327 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 DNAJC30Q96LL9 226 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 TMEM70Q9BUB7 260 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 SMIM2Q9BVW6 85 aa5.78□□□□□ -1.48
USP4-210ENST00000483212 TRBV27A0A0K0K1C4 114 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 IFI27P40305 119 aaPredicted RBP5.77□□□□□ -1.49
USP4-210ENST00000483212 NDUFA6P56556 154 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 RHOHQ15669 191 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 Q8N8P6 123 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 ST20Q9HBF5 79 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 PRO0255Q9UI72 69 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 HHLA3Q9XRX5 114 aa5.77□□□□□ -1.49
USP4-210ENST00000483212 LOC389332A0A1B0GUA5 103 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 SDHAF1A6NFY7 115 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 SERF1AO75920 110 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 UBE2D3P61077 147 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 UBE2D2P62837 147 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 NEGR1Q7Z3B1 354 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 NIT1Q86X76 327 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 PGPEP1Q9NXJ5 209 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 DNAH7Q8WXX0 4024 aa5.76□□□□□ -1.49
USP4-210ENST00000483212 STARD9Q9P2P6 4700 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 A0A096LNJ9 63 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 GAGE12JA6NER3 117 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 IFITM10A6NMD0 228 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 F5H768 121 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 TSHBP01222 138 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 LINC00614P0C842 121 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 SNRPEP62304 92 aaKnown RBP5.75□□□□□ -1.49
USP4-210ENST00000483212 GAGE1Q13065 139 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 GAGE4Q13068 117 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 GAGE5Q13069 117 aa5.75□□□□□ -1.49
USP4-210ENST00000483212 GAGE13Q4V321 117 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms