RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 ATXN8Q156A1 80 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 LINC01620Q4KN68 170 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 Q6Q795 121 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 C9orf47Q6ZRZ4 202 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 NEXN-AS1Q8NBZ9 246 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 LINC00694P0DN24 101 aa9.39□□□□□ -0.91
CCDC78-213ENST00000482878 LGALS3P17931 250 aaKnown RBP9.39□□□□□ -0.91
CCDC78-213ENST00000482878 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
CCDC78-213ENST00000482878 UBE2E1P51965 193 aa9.38□□□□□ -0.91
CCDC78-213ENST00000482878 EEF1AKMT3Q96AZ1 226 aa9.38□□□□□ -0.91
CCDC78-213ENST00000482878 IGHV3-64A0A075B6Q5 118 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 IGHV4-4A0A075B6R2 117 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 C11orf86A6NJI1 115 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 PF4V1P10720 104 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 KHDC1LQ5JSQ8 128 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
CCDC78-213ENST00000482878 U3KQE9 123 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 RPL39LQ96EH5 51 aaKnown RBP9.37□□□□□ -0.91
CCDC78-213ENST00000482878 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 DUX3Q96PT4 197 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 CSDC2Q9Y534 153 aaKnown RBP9.37□□□□□ -0.91
CCDC78-213ENST00000482878 CELSR2Q9HCU4 2923 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 FAM236AA0A1B0GUQ0 79 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 FAM236BA0A1B0GV22 79 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
CCDC78-213ENST00000482878 C16orf92Q96LL3 132 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 CCL19Q99731 98 aa9.37□□□□□ -0.91
CCDC78-213ENST00000482878 TRBV7-1A0A0A6YYK4 115 aa9.36□□□□□ -0.91
CCDC78-213ENST00000482878 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
CCDC78-213ENST00000482878 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
CCDC78-213ENST00000482878 HECTD1Q9ULT8 2610 aa9.36□□□□□ -0.91
CCDC78-213ENST00000482878 S100A4P26447 101 aaKnown RBP9.36□□□□□ -0.91
CCDC78-213ENST00000482878 DEFB1P60022 68 aa9.36□□□□□ -0.91
CCDC78-213ENST00000482878 PMVKQ15126 192 aa9.36□□□□□ -0.91
CCDC78-213ENST00000482878 C5orf47Q569G3 176 aa9.36□□□□□ -0.91
CCDC78-213ENST00000482878 TOMM6Q96B49 74 aa9.36□□□□□ -0.91
CCDC78-213ENST00000482878 C5orf56Q8N8D9 126 aa9.35□□□□□ -0.91
CCDC78-213ENST00000482878 MDFICQ9P1T7 246 aa9.35□□□□□ -0.91
CCDC78-213ENST00000482878 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
CCDC78-213ENST00000482878 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
CCDC78-213ENST00000482878 COX6B1P14854 86 aa9.35□□□□□ -0.91
CCDC78-213ENST00000482878 PRSS2P07478 247 aa9.34□□□□□ -0.91
CCDC78-213ENST00000482878 ELANEP08246 267 aa9.34□□□□□ -0.91
CCDC78-213ENST00000482878 C14orf178Q8N769 122 aaPredicted RBP9.34□□□□□ -0.91
CCDC78-213ENST00000482878 ITLN2Q8WWU7 325 aaPredicted RBP9.34□□□□□ -0.91
CCDC78-213ENST00000482878 IGKV3-20P01619 116 aa9.34□□□□□ -0.91
CCDC78-213ENST00000482878 UNQ9165/PRO28630Q6UXU0 137 aa9.34□□□□□ -0.91
CCDC78-213ENST00000482878 TMEM101Q96IK0 257 aa9.34□□□□□ -0.91
CCDC78-213ENST00000482878 USP24Q9UPU5 2620 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 TRGV11A0A075B6L2 103 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 LGALS9O00182 355 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 RPL13AP40429 203 aaKnown RBP9.33□□□□□ -0.92
CCDC78-213ENST00000482878 GPHB5Q86YW7 130 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 NPFFO15130 113 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 TRBV12-3P01733 135 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 SLC25A29Q8N8R3 303 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 LINC01587Q99440 93 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 ZNF256Q9Y2P7 627 aaPredicted RBP9.33□□□□□ -0.92
CCDC78-213ENST00000482878 KLK5Q9Y337 293 aaPredicted RBP9.33□□□□□ -0.92
CCDC78-213ENST00000482878 TRBV10-2A0A0K0K1G8 114 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
CCDC78-213ENST00000482878 HTN1P15515 57 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 LMO4P61968 165 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 C9orf139Q6ZV77 190 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 TRAV41A0A0B4J266 112 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 J3QQQ9 107 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 MUSTN1Q8IVN3 82 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 TP53TG1Q9Y2A0 90 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 HIST2H2BDQ6DRA6 164 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 DNAJC30Q96LL9 226 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 TEX15Q9BXT5 2789 aa9.32□□□□□ -0.92
CCDC78-213ENST00000482878 IGHV4-61A0A0C4DH41 118 aa9.31□□□□□ -0.92
CCDC78-213ENST00000482878 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
CCDC78-213ENST00000482878 H3BUX3 64 aa9.31□□□□□ -0.92
CCDC78-213ENST00000482878 CSMD2Q7Z408 3487 aa9.31□□□□□ -0.92
CCDC78-213ENST00000482878 VPS13CQ709C8 3753 aa9.31□□□□□ -0.92
CCDC78-213ENST00000482878 LENEPQ9Y5L5 61 aa9.31□□□□□ -0.92
CCDC78-213ENST00000482878 FLNBO75369 2602 aaKnown RBP9.31□□□□□ -0.92
CCDC78-213ENST00000482878 C19orf54Q5BKX5 351 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 PAPPA-AS1Q5QFB9 102 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 EDA2RQ9HAV5 297 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 F6UB75 175 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 NPC2P61916 151 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 HERVK_113P63121 156 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 TRAV21A0A0B4J279 112 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 SOCS3O14543 225 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 COX6CP09669 75 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 DPH3P1Q9H4G8 78 aa9.3□□□□□ -0.92
CCDC78-213ENST00000482878 GNRH2O43555 120 aa9.29□□□□□ -0.92
CCDC78-213ENST00000482878 IGHV4-38-2P0DP08 117 aa9.29□□□□□ -0.92
CCDC78-213ENST00000482878 PIMREGQ9BSJ6 248 aa9.29□□□□□ -0.92
CCDC78-213ENST00000482878 FAM223BA6NKX1 122 aa9.29□□□□□ -0.92
CCDC78-213ENST00000482878 TRIAP1O43715 76 aa9.29□□□□□ -0.92
CCDC78-213ENST00000482878 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms