RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 PRB2P02812 416 aaPredicted RBP3.5□□□□□ -1.85
RBM39-233ENST00000482563 AMELYQ99218 206 aa3.5□□□□□ -1.85
RBM39-233ENST00000482563 STRCP1A6NGW2 1772 aa3.49□□□□□ -1.85
RBM39-233ENST00000482563 ESPL1Q14674 2120 aa3.49□□□□□ -1.85
RBM39-233ENST00000482563 ATOX1O00244 68 aa3.49□□□□□ -1.85
RBM39-233ENST00000482563 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
RBM39-233ENST00000482563 IL9P15248 144 aa3.48□□□□□ -1.85
RBM39-233ENST00000482563 FAUP35544 74 aaKnown RBP3.48□□□□□ -1.85
RBM39-233ENST00000482563 TRAV23DV6A0A075B6W5 121 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 CRYM-AS1A6NIL9 109 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 INE1O15225 51 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 SFT2D2O95562 160 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 IGKV1-17P01599 117 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 KRTDAPP60985 99 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 PEA15Q15121 130 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 C10orf128Q5T292 105 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 CACNA1GO43497 2377 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 MAP3K1Q13233 1512 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 GYPAP02724 150 aa3.47□□□□□ -1.85
RBM39-233ENST00000482563 ABCA4P78363 2273 aa3.46□□□□□ -1.86
RBM39-233ENST00000482563 KDM6BO15054 1643 aa3.46□□□□□ -1.86
RBM39-233ENST00000482563 UQCRHLA0A096LP55 91 aa3.46□□□□□ -1.86
RBM39-233ENST00000482563 HIGD1CA8MV81 97 aa3.46□□□□□ -1.86
RBM39-233ENST00000482563 UQCRHP07919 91 aa3.46□□□□□ -1.86
RBM39-233ENST00000482563 TRAPPC2P0DI81 140 aa3.46□□□□□ -1.86
RBM39-233ENST00000482563 TRAPPC2BP0DI82 140 aa3.46□□□□□ -1.86
RBM39-233ENST00000482563 Q5VV11 94 aa3.46□□□□□ -1.86
RBM39-233ENST00000482563 TANC1Q9C0D5 1861 aa3.45□□□□□ -1.86
RBM39-233ENST00000482563 ADGRB2O60241 1585 aa3.45□□□□□ -1.86
RBM39-233ENST00000482563 TRBV7-3A0A075B6L6 115 aa3.45□□□□□ -1.86
RBM39-233ENST00000482563 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
RBM39-233ENST00000482563 CYP2G1PQ6ZSU1 146 aa3.45□□□□□ -1.86
RBM39-233ENST00000482563 C20orf197Q8N268 126 aa3.45□□□□□ -1.86
RBM39-233ENST00000482563 ZNF625Q96I27 306 aaPredicted RBP3.45□□□□□ -1.86
RBM39-233ENST00000482563 DLEC1Q9Y238 1755 aa3.45□□□□□ -1.86
RBM39-233ENST00000482563 NBDYA0A0U1RRE5 68 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 M0R2N4 97 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 BPESC1Q9GZL8 116 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 MAGI2Q86UL8 1455 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 IGKV3D-7A0A0C4DH55 119 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 IGKV3OR2-268A0A0C4DH90 116 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 RPL37AP61513 92 aaKnown RBP3.44□□□□□ -1.86
RBM39-233ENST00000482563 LINC00322Q6ZN03 302 aaPredicted RBP3.44□□□□□ -1.86
RBM39-233ENST00000482563 DEFB132Q7Z7B7 95 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 TET1Q8NFU7 2136 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 NRXN2Q9P2S2 1712 aa3.44□□□□□ -1.86
RBM39-233ENST00000482563 PXDNQ92626 1479 aa3.43□□□□□ -1.86
RBM39-233ENST00000482563 CYB5AP00167 134 aa3.43□□□□□ -1.86
RBM39-233ENST00000482563 MANBALQ9NQG1 85 aa3.43□□□□□ -1.86
RBM39-233ENST00000482563 TMEM14CQ9P0S9 112 aa3.43□□□□□ -1.86
RBM39-233ENST00000482563 COL4A6Q14031 1691 aa3.43□□□□□ -1.86
RBM39-233ENST00000482563 TNRC6BQ9UPQ9 1833 aaKnown RBP3.42□□□□□ -1.86
RBM39-233ENST00000482563 TRAV22A0A0B4J277 110 aa3.42□□□□□ -1.86
RBM39-233ENST00000482563 APOC3P02656 99 aa3.42□□□□□ -1.86
RBM39-233ENST00000482563 CACFD1Q9UGQ2 172 aa3.42□□□□□ -1.86
RBM39-233ENST00000482563 UACAQ9BZF9 1416 aa3.42□□□□□ -1.86
RBM39-233ENST00000482563 PSME4Q14997 1843 aa3.42□□□□□ -1.86
RBM39-233ENST00000482563 ERVK-7P63135 1459 aa3.42□□□□□ -1.86
RBM39-233ENST00000482563 ARHGEF12Q9NZN5 1544 aa3.42□□□□□ -1.86
RBM39-233ENST00000482563 EXPH5Q8NEV8 1989 aa3.42□□□□□ -1.86
RBM39-233ENST00000482563 PHRF1Q9P1Y6 1649 aaKnown RBP3.42□□□□□ -1.86
RBM39-233ENST00000482563 UBE2D3P61077 147 aa3.41□□□□□ -1.86
RBM39-233ENST00000482563 UBE2D2P62837 147 aa3.41□□□□□ -1.86
RBM39-233ENST00000482563 FAM167A-AS1Q96KT0 104 aa3.41□□□□□ -1.86
RBM39-233ENST00000482563 GBF1Q92538 1859 aa3.41□□□□□ -1.86
RBM39-233ENST00000482563 SPAG17Q6Q759 2223 aa3.41□□□□□ -1.86
RBM39-233ENST00000482563 DOCK2Q92608 1830 aa3.41□□□□□ -1.86
RBM39-233ENST00000482563 LOC110117498A0A087WWA1 95 aa3.41□□□□□ -1.86
RBM39-233ENST00000482563 S100A16Q96FQ6 103 aaKnown RBP3.41□□□□□ -1.86
RBM39-233ENST00000482563 MGST2Q99735 147 aa3.41□□□□□ -1.86
RBM39-233ENST00000482563 MED12Q93074 2177 aa3.4□□□□□ -1.86
RBM39-233ENST00000482563 SYS1-DBNDD2H3BUS1 97 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 HCRTO43612 131 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 CCL3L1P16619 93 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 ZNF56Q15929 161 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 TRGV9Q99603 122 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 CEP162Q5TB80 1403 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 RREB1Q92766 1687 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 RGPD4Q7Z3J3 1758 aa3.4□□□□□ -1.87
RBM39-233ENST00000482563 IGKV2-29A2NJV5 120 aaPredicted RBP3.39□□□□□ -1.87
RBM39-233ENST00000482563 H7BZZ5 65 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 IGLC7A0M8Q6 106 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 FXYD4P59646 89 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 FXYD3Q14802 87 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 ALKAL2Q6UX46 152 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
RBM39-233ENST00000482563 PPLO60437 1756 aa3.38□□□□□ -1.87
RBM39-233ENST00000482563 CDK13Q14004 1512 aaKnown RBP3.38□□□□□ -1.87
RBM39-233ENST00000482563 IGLV3-32A0A0A0MS00 114 aa3.38□□□□□ -1.87
RBM39-233ENST00000482563 CHKB-CPT1BH3BT56 60 aa3.38□□□□□ -1.87
RBM39-233ENST00000482563 SPATA45Q537H7 98 aa3.38□□□□□ -1.87
RBM39-233ENST00000482563 Q8N6K4 173 aa3.38□□□□□ -1.87
RBM39-233ENST00000482563 ARFGEF1Q9Y6D6 1849 aa3.38□□□□□ -1.87
RBM39-233ENST00000482563 DNMBPQ6XZF7 1577 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms