RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 RPL32P62910 135 aaKnown RBP11.04□□□□□ -0.64
ATG4B-220ENST00000482507 NF1P21359 2839 aa11.04□□□□□ -0.64
ATG4B-220ENST00000482507 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
ATG4B-220ENST00000482507 ID1P41134 155 aa11.04□□□□□ -0.64
ATG4B-220ENST00000482507 ANK3Q12955 4377 aaKnown RBP11.03□□□□□ -0.64
ATG4B-220ENST00000482507 F5H697 171 aa11.03□□□□□ -0.64
ATG4B-220ENST00000482507 FSHBP01225 129 aa11.03□□□□□ -0.64
ATG4B-220ENST00000482507 MTURNQ8N3F0 131 aa11.03□□□□□ -0.64
ATG4B-220ENST00000482507 IGHV3-16A0A0C4DH30 117 aa11.03□□□□□ -0.64
ATG4B-220ENST00000482507 SDHAF1A6NFY7 115 aa11.03□□□□□ -0.64
ATG4B-220ENST00000482507 FAM74A4Q5TZK3 123 aa11.03□□□□□ -0.64
ATG4B-220ENST00000482507 C9orf85Q96MD7 179 aa11.02□□□□□ -0.65
ATG4B-220ENST00000482507 TSPEAR-AS2P59090 65 aa11.01□□□□□ -0.65
ATG4B-220ENST00000482507 SPANXB1Q9NS25 103 aaPredicted RBP11.01□□□□□ -0.65
ATG4B-220ENST00000482507 A0A0J9YX75 114 aa11.01□□□□□ -0.65
ATG4B-220ENST00000482507 LGALS9O00182 355 aa11.01□□□□□ -0.65
ATG4B-220ENST00000482507 VCYO14598 125 aa11.01□□□□□ -0.65
ATG4B-220ENST00000482507 LY6G6DO95868 133 aa11.01□□□□□ -0.65
ATG4B-220ENST00000482507 PRO0461Q9UI25 63 aa11.01□□□□□ -0.65
ATG4B-220ENST00000482507 PMVKQ15126 192 aa11□□□□□ -0.65
ATG4B-220ENST00000482507 SH2D6Q7Z4S9 175 aa11□□□□□ -0.65
ATG4B-220ENST00000482507 Q8N1Y9 231 aa11□□□□□ -0.65
ATG4B-220ENST00000482507 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
ATG4B-220ENST00000482507 ZNF580Q9UK33 172 aa11□□□□□ -0.65
ATG4B-220ENST00000482507 TRBV27A0A0K0K1C4 114 aa11□□□□□ -0.65
ATG4B-220ENST00000482507 SCGB1D4Q6XE38 83 aa11□□□□□ -0.65
ATG4B-220ENST00000482507 F8W1H4 67 aa10.99□□□□□ -0.65
ATG4B-220ENST00000482507 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
ATG4B-220ENST00000482507 SCGB2A2Q13296 93 aa10.99□□□□□ -0.65
ATG4B-220ENST00000482507 SPINK13Q1W4C9 94 aa10.99□□□□□ -0.65
ATG4B-220ENST00000482507 KIR2DL4Q99706 377 aa10.99□□□□□ -0.65
ATG4B-220ENST00000482507 OPRPNQ99935 248 aaPredicted RBP10.99□□□□□ -0.65
ATG4B-220ENST00000482507 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
ATG4B-220ENST00000482507 ZNF256Q9Y2P7 627 aaPredicted RBP10.99□□□□□ -0.65
ATG4B-220ENST00000482507 K7EQG2 157 aa10.99□□□□□ -0.65
ATG4B-220ENST00000482507 M0QY20 66 aa10.99□□□□□ -0.65
ATG4B-220ENST00000482507 TRBV6-5A0A0K0K1A5 114 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 UBE2D1P51668 147 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 ETDBQ3ZM63 59 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 TIMM17AQ99595 171 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 A0A0J9YY99 117 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 SYNJ2BPP57105 145 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 Q6YL49 198 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 TMEM141Q96I45 108 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 F8P00451 2351 aa10.98□□□□□ -0.65
ATG4B-220ENST00000482507 ZNF876PQ49A33 203 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 ODF3Q96PU9 254 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 P0DMU3 169 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 FAM231AP0DMU4 169 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 FAM231CP0DMU5 169 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 SRSF9Q13242 221 aaKnown RBP eCLIP10.97□□□□□ -0.652e-8■■■□□ 15
ATG4B-220ENST00000482507 ZNF56Q15929 161 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 AMELXQ99217 191 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 SORL1Q92673 2214 aa10.97□□□□□ -0.65
ATG4B-220ENST00000482507 SETD2Q9BYW2 2564 aaPredicted RBP10.96□□□□□ -0.65
ATG4B-220ENST00000482507 SAMD13Q5VXD3 122 aa10.96□□□□□ -0.65
ATG4B-220ENST00000482507 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
ATG4B-220ENST00000482507 TEP1Q99973 2627 aaKnown RBP10.96□□□□□ -0.65
ATG4B-220ENST00000482507 NIPBLQ6KC79 2804 aaeCLIP10.96□□□□□ -0.66
ATG4B-220ENST00000482507 IGHV1OR15-1A0A075B7D0 117 aa10.96□□□□□ -0.66
ATG4B-220ENST00000482507 SNRPD3P62318 126 aaKnown RBP10.96□□□□□ -0.66
ATG4B-220ENST00000482507 GAGE13Q4V321 117 aa10.96□□□□□ -0.66
ATG4B-220ENST00000482507 TMEM170BQ5T4T1 132 aa10.96□□□□□ -0.66
ATG4B-220ENST00000482507 MRPL16Q9NX20 251 aaKnown RBP10.96□□□□□ -0.66
ATG4B-220ENST00000482507 INSL3P51460 131 aa10.95□□□□□ -0.66
ATG4B-220ENST00000482507 TSPAN13O95857 204 aa10.95□□□□□ -0.66
ATG4B-220ENST00000482507 RBMY1A1P0DJD3 496 aaKnown RBP10.95□□□□□ -0.66
ATG4B-220ENST00000482507 RBMY1CP0DJD4 496 aa10.95□□□□□ -0.66
ATG4B-220ENST00000482507 RBMY1FQ15415 496 aaKnown RBP10.95□□□□□ -0.66
ATG4B-220ENST00000482507 PAPPA-AS1Q5QFB9 102 aa10.95□□□□□ -0.66
ATG4B-220ENST00000482507 SPAG8Q99932 426 aaPredicted RBP10.95□□□□□ -0.66
ATG4B-220ENST00000482507 INAFM1C9JVW0 142 aa10.94□□□□□ -0.66
ATG4B-220ENST00000482507 FN1P02751 2386 aaKnown RBP10.94□□□□□ -0.66
ATG4B-220ENST00000482507 NSD1Q96L73 2696 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-220ENST00000482507 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-220ENST00000482507 HERVK_113P61574 105 aa10.94□□□□□ -0.66
ATG4B-220ENST00000482507 TSSC4Q9Y5U2 329 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-220ENST00000482507 APOMO95445 188 aa10.93□□□□□ -0.66
ATG4B-220ENST00000482507 NSUN5P1Q3KNT7 163 aa10.93□□□□□ -0.66
ATG4B-220ENST00000482507 SYT8Q8NBV8 401 aa10.93□□□□□ -0.66
ATG4B-220ENST00000482507 TMEM238C9JI98 176 aa10.93□□□□□ -0.66
ATG4B-220ENST00000482507 IGHV3-30P01768 117 aa10.93□□□□□ -0.66
ATG4B-220ENST00000482507 IGHV3-30-5P0DP03 117 aa10.93□□□□□ -0.66
ATG4B-220ENST00000482507 MAST4O15021 2626 aa10.93□□□□□ -0.66
ATG4B-220ENST00000482507 PRM2P04554 102 aa10.92□□□□□ -0.66
ATG4B-220ENST00000482507 HOXD3P31249 432 aaPredicted RBP10.92□□□□□ -0.66
ATG4B-220ENST00000482507 NDUFA11Q86Y39 141 aa10.92□□□□□ -0.66
ATG4B-220ENST00000482507 ESM1Q9NQ30 184 aa10.92□□□□□ -0.66
ATG4B-220ENST00000482507 VPREB3Q9UKI3 123 aa10.92□□□□□ -0.66
ATG4B-220ENST00000482507 TMEM89A2RUT3 159 aa10.92□□□□□ -0.66
ATG4B-220ENST00000482507 J3QQQ9 107 aa10.92□□□□□ -0.66
ATG4B-220ENST00000482507 TRPT1Q86TN4 253 aaKnown RBP10.92□□□□□ -0.66
ATG4B-220ENST00000482507 NFE4Q86UQ8 179 aa10.92□□□□□ -0.66
ATG4B-220ENST00000482507 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
ATG4B-220ENST00000482507 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
ATG4B-220ENST00000482507 CFC1P0CG37 223 aa10.91□□□□□ -0.66
ATG4B-220ENST00000482507 RHOHQ15669 191 aa10.91□□□□□ -0.66
ATG4B-220ENST00000482507 C18orf65Q6ZTR6 163 aa10.91□□□□□ -0.66
ATG4B-220ENST00000482507 JMJD1CQ15652 2540 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms