RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 LINC01587Q99440 93 aa4.52□□□□□ -1.69
NCK1-208ENST00000482071 HIST1H2BLQ99880 126 aa4.52□□□□□ -1.69
NCK1-208ENST00000482071 TPPP3Q9BW30 176 aa4.52□□□□□ -1.69
NCK1-208ENST00000482071 GOLT1BQ9Y3E0 138 aa4.52□□□□□ -1.69
NCK1-208ENST00000482071 A8MWV9 139 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 D6R8Y8 96 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 RS1O15537 224 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 SERF1AO75920 110 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 TNFRSF6BO95407 300 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 NPYP01303 97 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 RPL35AP18077 110 aaKnown RBP4.51□□□□□ -1.69
NCK1-208ENST00000482071 POLR2KP53803 58 aaKnown RBP4.51□□□□□ -1.69
NCK1-208ENST00000482071 ZNF876PQ49A33 203 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 ZFP2Q6ZN57 461 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 Q6ZWC4 215 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 SMIM15Q7Z3B0 74 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 C14orf178Q8N769 122 aaPredicted RBP4.51□□□□□ -1.69
NCK1-208ENST00000482071 C16orf74Q96GX8 76 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 PRELID3AQ96N28 172 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 C20orf78Q9BR46 151 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 C2orf88Q9BSF0 95 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 SAMD10Q9BYL1 202 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 JPT2Q9H910 190 aa4.51□□□□□ -1.69
NCK1-208ENST00000482071 COL6A5A8TX70 2615 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 A0A096LNJ9 63 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 K7EMI3 77 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 M0QY20 66 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 PPP1R17O96001 155 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 IGHV4-30-4P0DP06 118 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 PMCHP20382 165 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 CKS2P33552 79 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 APOC4P55056 127 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 GAGE1Q13065 139 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 IQCJQ1A5X6 159 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 CFAP126Q5VTH2 177 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 RNF183Q96D59 192 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 TP53TG1Q9Y2A0 90 aa4.5□□□□□ -1.69
NCK1-208ENST00000482071 NOTCH3Q9UM47 2321 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 LINC00587B1AMM8 73 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 G3V4G9 280 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 SMKR1H3BMG3 65 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 NUDT3O95989 172 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 IGHV3-53P01767 116 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 GATA1P15976 413 aaPredicted RBP4.49□□□□□ -1.69
NCK1-208ENST00000482071 RRN3P1Q2M238 152 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 SUMO4Q6EEV6 95 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 BAGE3Q86Y29 109 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 Q8N8P6 123 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 TMEM18Q96B42 140 aa4.49□□□□□ -1.69
NCK1-208ENST00000482071 NXT2Q9NPJ8 142 aaKnown RBP4.49□□□□□ -1.69
NCK1-208ENST00000482071 TRAV4A0A0B4J268 109 aa4.48□□□□□ -1.69
NCK1-208ENST00000482071 TRBV27A0A0K0K1C4 114 aa4.48□□□□□ -1.69
NCK1-208ENST00000482071 TSTD3H0UI37 97 aa4.48□□□□□ -1.69
NCK1-208ENST00000482071 RHODO00212 210 aa4.48□□□□□ -1.69
NCK1-208ENST00000482071 IFI27P40305 119 aaPredicted RBP4.48□□□□□ -1.69
NCK1-208ENST00000482071 SUMO2P61956 95 aaKnown RBP4.48□□□□□ -1.69
NCK1-208ENST00000482071 JOSD1Q15040 202 aaPredicted RBP4.48□□□□□ -1.69
NCK1-208ENST00000482071 Q8NAQ8 132 aa4.48□□□□□ -1.69
NCK1-208ENST00000482071 TMEM208Q9BTX3 173 aa4.48□□□□□ -1.69
NCK1-208ENST00000482071 MAP1LC3AQ9H492 121 aa4.48□□□□□ -1.69
NCK1-208ENST00000482071 NIT2Q9NQR4 276 aa4.48□□□□□ -1.69
NCK1-208ENST00000482071 TIMM8BQ9Y5J9 83 aaPredicted RBP4.48□□□□□ -1.69
NCK1-208ENST00000482071 TRAV26-2A0A0B4J265 109 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 IGHV1-24A0A0C4DH33 117 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 HSBP1O75506 76 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 NCR2O95944 276 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 SMIM17P0DL12 118 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 MIFP14174 115 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 FABP4P15090 132 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 PDZD11Q5EBL8 140 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 PYY3Q5JQD4 70 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 Q6ZTI0 123 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 SPATA12Q7Z6I5 190 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 Q8N976 141 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 PRSS3P2Q8NHM4 247 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 RPL39LQ96EH5 51 aaKnown RBP4.47□□□□□ -1.69
NCK1-208ENST00000482071 DNAJC30Q96LL9 226 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 TMEM70Q9BUB7 260 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 SMIM2Q9BVW6 85 aa4.47□□□□□ -1.69
NCK1-208ENST00000482071 HUWE1Q7Z6Z7 4374 aaKnown RBP4.46□□□□□ -1.69
NCK1-208ENST00000482071 A0A087WWL8 130 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 TRBV10-1A0A0K0K1A3 114 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 LYRM9A8MSI8 78 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 H7C1H1 209 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 VCYO14598 125 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 HTN1P15515 57 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 S100A2P29034 98 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 FCER1GP30273 86 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 RIPPLY3P57055 190 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 FAM19A2Q8N3H0 131 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 OR10D4PQ8NGN7 298 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 NOP10Q9NPE3 64 aaKnown RBP4.46□□□□□ -1.7
NCK1-208ENST00000482071 MRPL16Q9NX20 251 aaKnown RBP4.46□□□□□ -1.7
NCK1-208ENST00000482071 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.7
NCK1-208ENST00000482071 IGHV3OR16-12A0A075B7B8 117 aa4.45□□□□□ -1.7
NCK1-208ENST00000482071 TRBV6-4A0A1B0GX49 114 aa4.45□□□□□ -1.7
NCK1-208ENST00000482071 LINC01549A6NIU2 74 aa4.45□□□□□ -1.7
NCK1-208ENST00000482071 TCAPO15273 167 aa4.45□□□□□ -1.7
NCK1-208ENST00000482071 LINC00694P0DN24 101 aa4.45□□□□□ -1.7
NCK1-208ENST00000482071 AMTP48728 403 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms