RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 C1QBP02746 253 aa5.9□□□□□ -1.46
HLA-B-253ENST00000481849 AKR1C3P42330 323 aa5.9□□□□□ -1.46
HLA-B-253ENST00000481849 FHITP49789 147 aa5.9□□□□□ -1.46
HLA-B-253ENST00000481849 SSTP61278 116 aa5.9□□□□□ -1.46
HLA-B-253ENST00000481849 KCNIP4Q6PIL6 250 aa5.9□□□□□ -1.46
HLA-B-253ENST00000481849 SCXQ7RTU7 201 aa5.9□□□□□ -1.46
HLA-B-253ENST00000481849 STOML3Q8TAV4 291 aa5.9□□□□□ -1.46
HLA-B-253ENST00000481849 NKX6-2Q9C056 277 aaPredicted RBP5.9□□□□□ -1.46
HLA-B-253ENST00000481849 ZFP30Q9Y2G7 519 aa5.9□□□□□ -1.46
HLA-B-253ENST00000481849 MUC21A0A0G2JKD1 596 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 MUC21A0A140T8X8 626 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 TMEM262E9PQX1 116 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 SMLR1H3BR10 107 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 PAGE4O60829 102 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 LTAP01374 205 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 RPL36AP83881 106 aaKnown RBP5.89□□□□□ -1.47
HLA-B-253ENST00000481849 RPL19P84098 196 aaKnown RBP5.89□□□□□ -1.47
HLA-B-253ENST00000481849 ZNF674Q2M3X9 581 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 DNLZQ5SXM8 178 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 Q6ZSA8 131 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 ZFP82Q8N141 532 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 Q8N976 141 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 RPL36ALQ969Q0 106 aaKnown RBP5.89□□□□□ -1.47
HLA-B-253ENST00000481849 CYTL1Q9NRR1 136 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 COX11Q9Y6N1 276 aa5.89□□□□□ -1.47
HLA-B-253ENST00000481849 GAGE12HA6NDE8 117 aa5.88□□□□□ -1.47
HLA-B-253ENST00000481849 G3V3Q6 166 aa5.88□□□□□ -1.47
HLA-B-253ENST00000481849 SEC11BP0C7V7 166 aa5.88□□□□□ -1.47
HLA-B-253ENST00000481849 UBE2D3P61077 147 aa5.88□□□□□ -1.47
HLA-B-253ENST00000481849 UBE2D2P62837 147 aa5.88□□□□□ -1.47
HLA-B-253ENST00000481849 ZNF56Q15929 161 aa5.88□□□□□ -1.47
HLA-B-253ENST00000481849 COX8CQ7Z4L0 72 aa5.88□□□□□ -1.47
HLA-B-253ENST00000481849 C15orf54Q8N8G6 183 aa5.88□□□□□ -1.47
HLA-B-253ENST00000481849 TRBV7-3A0A075B6L6 115 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 TRBV10-1A0A0K0K1A3 114 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 TRBV6-1A0A0K0K1D8 114 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 CRPP02741 224 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 ELOBQ15370 118 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 PRR27Q6MZM9 219 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 OR10AG1Q8NH19 301 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 FAM213BQ8TBF2 198 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 SFT2D1Q8WV19 159 aa5.87□□□□□ -1.47
HLA-B-253ENST00000481849 F5H697 171 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 HLA-DQA1P01909 254 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 MPV17L2Q567V2 206 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 ENHOQ6UWT2 76 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 NEXN-AS1Q8NBZ9 246 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 CIRBP-AS1Q8TBR5 109 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 CHCHD5Q9BSY4 110 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 CHAC1Q9BUX1 264 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 C1orf43Q9BWL3 253 aa5.86□□□□□ -1.47
HLA-B-253ENST00000481849 ZNF471Q9BX82 626 aaPredicted RBP5.86□□□□□ -1.47
HLA-B-253ENST00000481849 TRBV6-8A0A0A6YYG3 113 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 PFDN1O60925 122 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 IGLV2-8P01709 118 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 ANGP03950 147 aaKnown RBP5.85□□□□□ -1.47
HLA-B-253ENST00000481849 RAB4BP61018 213 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 Q0VG73 95 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 SPANXN1Q5VSR9 72 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 CLPSL2Q6UWE3 100 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 BAGE2Q86Y30 109 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 OR10G8Q8NGN5 311 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 TCEAL7Q9BRU2 100 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 CHCHD7Q9BUK0 85 aa5.85□□□□□ -1.47
HLA-B-253ENST00000481849 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
HLA-B-253ENST00000481849 USP17L23D6RBM5 183 aa5.84□□□□□ -1.47
HLA-B-253ENST00000481849 GAGE6Q13070 117 aa5.84□□□□□ -1.47
HLA-B-253ENST00000481849 RGS21Q2M5E4 152 aa5.84□□□□□ -1.47
HLA-B-253ENST00000481849 ATRAIDQ6UW56 229 aa5.84□□□□□ -1.47
HLA-B-253ENST00000481849 TPPP3Q9BW30 176 aa5.84□□□□□ -1.47
HLA-B-253ENST00000481849 S100A9P06702 114 aaKnown RBP5.83□□□□□ -1.48
HLA-B-253ENST00000481849 MGPP08493 103 aa5.83□□□□□ -1.48
HLA-B-253ENST00000481849 SMIM17P0DL12 118 aa5.83□□□□□ -1.48
HLA-B-253ENST00000481849 C14orf177Q52M58 125 aa5.83□□□□□ -1.48
HLA-B-253ENST00000481849 NTM-AS1Q6ZSK4 140 aa5.83□□□□□ -1.48
HLA-B-253ENST00000481849 KCNRGQ8N5I3 272 aa5.83□□□□□ -1.48
HLA-B-253ENST00000481849 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.83□□□□□ -1.48
HLA-B-253ENST00000481849 MBD3L1Q8WWY6 194 aa5.83□□□□□ -1.48
HLA-B-253ENST00000481849 DERL1Q9BUN8 251 aa5.83□□□□□ -1.48
HLA-B-253ENST00000481849 SNAI2O43623 268 aa5.82□□□□□ -1.48
HLA-B-253ENST00000481849 PRSS1P07477 247 aa5.82□□□□□ -1.48
HLA-B-253ENST00000481849 GZMBP10144 247 aa5.82□□□□□ -1.48
HLA-B-253ENST00000481849 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
HLA-B-253ENST00000481849 TMUB2Q71RG4 321 aa5.82□□□□□ -1.48
HLA-B-253ENST00000481849 LINC00269Q8N2A0 174 aa5.82□□□□□ -1.48
HLA-B-253ENST00000481849 IGLV10-54A0A075B6I4 117 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 KANTRA0A1W2PQU2 76 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 UMAD1C9J7I0 102 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 BCL2L11O43521 198 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 CXCL1P09341 107 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 OR5AL1P0C617 328 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 RPL35P42766 123 aaKnown RBP5.81□□□□□ -1.48
HLA-B-253ENST00000481849 RBX1P62877 108 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 BLOC1S1P78537 153 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 CCL20P78556 96 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 MIAQ16674 131 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 AP1S3Q96PC3 154 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 GNG13Q9P2W3 67 aa5.81□□□□□ -1.48
HLA-B-253ENST00000481849 KIF25-AS1Q9Y6Z4 181 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms