RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 SYCNQ0VAF6 134 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 NMSQ5H8A3 153 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 CLPSL2Q6UWE3 100 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 OR1S1Q8NH92 325 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 FAM3DQ96BQ1 224 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 TVP23CQ96ET8 276 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 LINC00526Q96FQ7 95 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 CARD19Q96LW7 228 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 MGLLQ99685 303 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 GABARAPL3Q9BY60 117 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 CCDC90BQ9GZT6 254 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 AGPAT4-IT1Q9H0P7 198 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 U3KQ87 197 aa0.98□□□□□ -2.25
USH2A-204ENST00000481786 TRBV10-1A0A0K0K1A3 114 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 LOC100506127A0A0U1RQW1 187 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 RBAKDNA6NC62 111 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 CEBPZOSA8MTT3 80 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 A8MWV9 139 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 GPR31O00270 319 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 MRPS12O15235 138 aaKnown RBP0.97□□□□□ -2.25
USH2A-204ENST00000481786 HYPMO75409 117 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 APOMO95445 188 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 PTTG1O95997 202 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 LINC00869P0C866 280 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 HSMCR30P0CW71 290 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 IGLC2P0DOY2 106 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 MYL12AP19105 171 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 SPRR2DP22532 72 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 POLR2IP36954 125 aaKnown RBP0.97□□□□□ -2.25
USH2A-204ENST00000481786 RPL28P46779 137 aaKnown RBP0.97□□□□□ -2.25
USH2A-204ENST00000481786 ETV1P50549 477 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 RAB5CP51148 216 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 GNG2P59768 71 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 KRTAP12-3P60328 96 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 ZNF266Q14584 549 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 SURF2Q15527 256 aaPredicted RBP0.97□□□□□ -2.25
USH2A-204ENST00000481786 CDNFQ49AH0 187 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 TMEM78Q5T7P6 136 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 Q6AWC8 147 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 LPCAT3Q6P1A2 487 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 Q6Q795 121 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 NTM-AS1Q6ZSK4 140 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 BPIFA4PQ86YQ2 179 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 FAM19A2Q8N3H0 131 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.97□□□□□ -2.25
USH2A-204ENST00000481786 OR2T35Q8NGX2 323 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 PTH2Q96A98 100 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.97□□□□□ -2.25
USH2A-204ENST00000481786 HIGD1AQ9Y241 93 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 PHLDA3Q9Y5J5 127 aa0.97□□□□□ -2.25
USH2A-204ENST00000481786 TRBV7-3A0A075B6L6 115 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 IRGMA1A4Y4 181 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 A6NN06 94 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 A8MUU9 505 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 CASQ2O14958 399 aaPredicted RBP0.96□□□□□ -2.26
USH2A-204ENST00000481786 GNRH2O43555 120 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 NUPR1O60356 82 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 SCGNO76038 276 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 SPINK1P00995 79 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 IGKV1-5P01602 117 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 UCHL1P09936 223 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 OR5G3P0C626 314 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 HIST1H1EP10412 219 aaKnown RBP0.96□□□□□ -2.26
USH2A-204ENST00000481786 PLP1P60201 277 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 UBE2D3P61077 147 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 UBE2D2P62837 147 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 UBE2BP63146 152 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 ERCC8Q13216 396 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 TMEM97Q5BJF2 176 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 AHSA2Q719I0 299 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 DTD1Q8TEA8 209 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 CANT1Q8WVQ1 401 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 ISOC2Q96AB3 205 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 GABARAPL1Q9H0R8 117 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 ATG5Q9H1Y0 275 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 ZNF492Q9P255 531 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 COMMD3Q9UBI1 195 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 NAGKQ9UJ70 344 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 PRELID1Q9Y255 219 aa0.96□□□□□ -2.26
USH2A-204ENST00000481786 TRBV25-1A0A075B6N4 114 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 A0A0A6YYH2 397 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 IGHV1-58A0A0C4DH39 117 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 DUXBA0A1W2PPF3 345 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 C19orf71A6NCJ1 209 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 A6NJ64 397 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.95□□□□□ -2.26
USH2A-204ENST00000481786 H3BQ15 152 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 M0QXV9 152 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 M0R3E3 92 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 WRBO00258 174 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 FKBP6O75344 327 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 ARL6IP5O75915 188 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 TYMSP04818 313 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 IL5P05113 134 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 BCL2P10415 239 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 SULT1A2P50226 295 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 S100A10P60903 97 aa0.95□□□□□ -2.26
USH2A-204ENST00000481786 RPS29P62273 56 aaKnown RBP0.95□□□□□ -2.26
USH2A-204ENST00000481786 RAB11AP62491 216 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms