RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 ZFP2Q6ZN57 461 aa14.44□□□□□ -0.1
CHKB-209ENST00000481673 DKK2Q9UBU2 259 aa14.44□□□□□ -0.1
CHKB-209ENST00000481673 PLNP26678 52 aa14.44□□□□□ -0.1
CHKB-209ENST00000481673 RIPPLY3P57055 190 aa14.44□□□□□ -0.1
CHKB-209ENST00000481673 UFSP1Q6NVU6 142 aa14.44□□□□□ -0.1
CHKB-209ENST00000481673 EREGO14944 169 aa14.43□□□□□ -0.1
CHKB-209ENST00000481673 I3L3M4 83 aa14.42□□□□□ -0.1
CHKB-209ENST00000481673 CFAP126Q5VTH2 177 aa14.42□□□□□ -0.1
CHKB-209ENST00000481673 TMEM263Q8WUH6 116 aaKnown RBP14.42□□□□□ -0.1
CHKB-209ENST00000481673 TMEM141Q96I45 108 aa14.42□□□□□ -0.1
CHKB-209ENST00000481673 HIVEP1P15822 2718 aa14.42□□□□□ -0.1
CHKB-209ENST00000481673 C9orf66Q5T8R8 295 aa14.42□□□□□ -0.1
CHKB-209ENST00000481673 RS1O15537 224 aa14.41□□□□□ -0.1
CHKB-209ENST00000481673 IL17DQ8TAD2 202 aa14.41□□□□□ -0.1
CHKB-209ENST00000481673 TIMM17AQ99595 171 aa14.41□□□□□ -0.1
CHKB-209ENST00000481673 HHLA3Q9XRX5 114 aa14.41□□□□□ -0.1
CHKB-209ENST00000481673 DLEU1O43261 78 aa14.4□□□□□ -0.1
CHKB-209ENST00000481673 RNASE8Q8TDE3 154 aaKnown RBP14.4□□□□□ -0.1
CHKB-209ENST00000481673 DNAJC30Q96LL9 226 aa14.4□□□□□ -0.1
CHKB-209ENST00000481673 F8VRH5 84 aa14.4□□□□□ -0.1
CHKB-209ENST00000481673 NEXN-AS1Q8NBZ9 246 aa14.4□□□□□ -0.1
CHKB-209ENST00000481673 ANKRD39Q53RE8 183 aa14.39□□□□□ -0.11
CHKB-209ENST00000481673 STPG4Q8N801 248 aa14.39□□□□□ -0.11
CHKB-209ENST00000481673 CITED1Q99966 193 aa14.39□□□□□ -0.11
CHKB-209ENST00000481673 MRPL35Q9NZE8 188 aaKnown RBP14.39□□□□□ -0.11
CHKB-209ENST00000481673 TNFRSF18Q9Y5U5 241 aa14.39□□□□□ -0.11
CHKB-209ENST00000481673 C2CD3Q4AC94 2353 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 IGHV3OR16-12A0A075B7B8 117 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 IGHV3-53P01767 116 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 PRM2P04554 102 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 AZU1P20160 251 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 NEGR1Q7Z3B1 354 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 GTSCR1Q86UQ5 136 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 TP53TG1Q9Y2A0 90 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 FN1P02751 2386 aaKnown RBP14.38□□□□□ -0.11
CHKB-209ENST00000481673 IGIPA6NJ69 53 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 SIVA1O15304 175 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 GIG44P09565 113 aaPredicted RBP14.38□□□□□ -0.11
CHKB-209ENST00000481673 DAZ2Q13117 558 aaKnown RBP14.38□□□□□ -0.11
CHKB-209ENST00000481673 COL5A1-AS1Q5SY13 56 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 LURAP1LQ8IV03 231 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 C16orf74Q96GX8 76 aa14.38□□□□□ -0.11
CHKB-209ENST00000481673 CHTOPQ9Y3Y2 248 aaKnown RBP14.38□□□□□ -0.11
CHKB-209ENST00000481673 PAPPA-AS1Q5QFB9 102 aa14.37□□□□□ -0.11
CHKB-209ENST00000481673 BOD1L2Q8IYS8 172 aa14.37□□□□□ -0.11
CHKB-209ENST00000481673 BAALCQ8WXS3 180 aa14.37□□□□□ -0.11
CHKB-209ENST00000481673 CIDEAO60543 219 aa14.36□□□□□ -0.11
CHKB-209ENST00000481673 C12orf54Q6X4T0 127 aa14.36□□□□□ -0.11
CHKB-209ENST00000481673 MRPL16Q9NX20 251 aaKnown RBP14.36□□□□□ -0.11
CHKB-209ENST00000481673 TSHBP01222 138 aa14.35□□□□□ -0.11
CHKB-209ENST00000481673 ZC2HC1BQ5TFG8 222 aa14.35□□□□□ -0.11
CHKB-209ENST00000481673 CSNK1G2-AS1Q8NCQ2 148 aa14.35□□□□□ -0.11
CHKB-209ENST00000481673 RPL35AP18077 110 aaKnown RBP14.34□□□□□ -0.11
CHKB-209ENST00000481673 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.34□□□□□ -0.11
CHKB-209ENST00000481673 C20orf203Q8NBC4 194 aa14.34□□□□□ -0.11
CHKB-209ENST00000481673 OR4C5Q8NGB2 326 aa14.34□□□□□ -0.11
CHKB-209ENST00000481673 IGHV3-73A0A0B4J1V6 119 aa14.33□□□□□ -0.11
CHKB-209ENST00000481673 PRSS29PA6NIE9 313 aa14.33□□□□□ -0.11
CHKB-209ENST00000481673 FGF6P10767 208 aa14.33□□□□□ -0.11
CHKB-209ENST00000481673 PMVKQ15126 192 aa14.33□□□□□ -0.11
CHKB-209ENST00000481673 BATFQ16520 125 aa14.33□□□□□ -0.11
CHKB-209ENST00000481673 TRGV1A0A0A0MS02 117 aa14.33□□□□□ -0.12
CHKB-209ENST00000481673 NPSP0C0P6 89 aa14.33□□□□□ -0.12
CHKB-209ENST00000481673 RRN3P1Q2M238 152 aa14.33□□□□□ -0.12
CHKB-209ENST00000481673 WFDC10AQ9H1F0 79 aa14.33□□□□□ -0.12
CHKB-209ENST00000481673 NIPBLQ6KC79 2804 aaeCLIP14.32□□□□□ -0.12
CHKB-209ENST00000481673 TRAV4A0A0B4J268 109 aa14.31□□□□□ -0.12
CHKB-209ENST00000481673 A0A1B0GV90 55 aa14.31□□□□□ -0.12
CHKB-209ENST00000481673 NMUP48645 174 aa14.31□□□□□ -0.12
CHKB-209ENST00000481673 TRBV10-1A0A0K0K1A3 114 aa14.31□□□□□ -0.12
CHKB-209ENST00000481673 OVOL2Q9BRP0 275 aa14.31□□□□□ -0.12
CHKB-209ENST00000481673 PYGO1Q9Y3Y4 419 aa14.31□□□□□ -0.12
CHKB-209ENST00000481673 P0DMU3 169 aa14.3□□□□□ -0.12
CHKB-209ENST00000481673 FAM231AP0DMU4 169 aa14.3□□□□□ -0.12
CHKB-209ENST00000481673 FAM231CP0DMU5 169 aa14.3□□□□□ -0.12
CHKB-209ENST00000481673 HINT1P49773 126 aaPredicted RBP14.3□□□□□ -0.12
CHKB-209ENST00000481673 RPL39P62891 51 aaKnown RBP14.3□□□□□ -0.12
CHKB-209ENST00000481673 CRYBA4P53673 196 aa14.29□□□□□ -0.12
CHKB-209ENST00000481673 CST9LQ9H4G1 147 aa14.29□□□□□ -0.12
CHKB-209ENST00000481673 TMEM97Q5BJF2 176 aa14.29□□□□□ -0.12
CHKB-209ENST00000481673 Q6ZSN1 163 aa14.29□□□□□ -0.12
CHKB-209ENST00000481673 WFDC9Q8NEX5 89 aa14.29□□□□□ -0.12
CHKB-209ENST00000481673 C2orf91Q6ZV80 131 aa14.28□□□□□ -0.12
CHKB-209ENST00000481673 NOP10Q9NPE3 64 aaKnown RBP14.28□□□□□ -0.12
CHKB-209ENST00000481673 MPV17L2Q567V2 206 aa14.27□□□□□ -0.12
CHKB-209ENST00000481673 Q6ZTI0 123 aa14.27□□□□□ -0.13
CHKB-209ENST00000481673 HIGD1BQ9P298 99 aa14.27□□□□□ -0.13
CHKB-209ENST00000481673 COTL1Q14019 142 aa14.26□□□□□ -0.13
CHKB-209ENST00000481673 PLAC8L1A1L4L8 177 aa14.25□□□□□ -0.13
CHKB-209ENST00000481673 SMIM9A6NGZ8 99 aa14.25□□□□□ -0.13
CHKB-209ENST00000481673 PCP2Q8IVA1 136 aa14.25□□□□□ -0.13
CHKB-209ENST00000481673 JMJD1CQ15652 2540 aa14.25□□□□□ -0.13
CHKB-209ENST00000481673 TRBV7-3A0A075B6L6 115 aa14.25□□□□□ -0.13
CHKB-209ENST00000481673 WIPF1O43516 503 aa14.25□□□□□ -0.13
CHKB-209ENST00000481673 RPL36AP83881 106 aaKnown RBP14.25□□□□□ -0.13
CHKB-209ENST00000481673 BVES-AS1Q5T3Y7 98 aa14.25□□□□□ -0.13
CHKB-209ENST00000481673 RPL36ALQ969Q0 106 aaKnown RBP14.25□□□□□ -0.13
CHKB-209ENST00000481673 IGKV2D-26A0A0A0MRZ7 120 aa14.24□□□□□ -0.13
CHKB-209ENST00000481673 KIR2DL5BQ8NHK3 375 aa14.24□□□□□ -0.13
CHKB-209ENST00000481673 ZNF479Q96JC4 524 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms