RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 SPINK13Q1W4C9 94 aa13.58□□□□□ -0.24
MRPL28-209ENST00000481453 KIF25-AS1Q9Y6Z4 181 aa13.58□□□□□ -0.24
MRPL28-209ENST00000481453 PRSS29PA6NIE9 313 aa13.58□□□□□ -0.24
MRPL28-209ENST00000481453 KNCNA6PVL3 124 aa13.58□□□□□ -0.24
MRPL28-209ENST00000481453 CCL24O00175 119 aa13.58□□□□□ -0.24
MRPL28-209ENST00000481453 DEFB131AP59861 70 aa13.58□□□□□ -0.24
MRPL28-209ENST00000481453 MYMXA0A1B0GTQ4 84 aa13.57□□□□□ -0.24
MRPL28-209ENST00000481453 A8MTW9 85 aa13.57□□□□□ -0.24
MRPL28-209ENST00000481453 CD7P09564 240 aa13.57□□□□□ -0.24
MRPL28-209ENST00000481453 LINC00315P59091 139 aa13.57□□□□□ -0.24
MRPL28-209ENST00000481453 DYNLRB2Q8TF09 96 aa13.57□□□□□ -0.24
MRPL28-209ENST00000481453 JPT2Q9H910 190 aa13.57□□□□□ -0.24
MRPL28-209ENST00000481453 MUC4Q99102 2169 aa13.56□□□□□ -0.24
MRPL28-209ENST00000481453 CD300EQ496F6 205 aaPredicted RBP13.56□□□□□ -0.24
MRPL28-209ENST00000481453 TSSC4Q9Y5U2 329 aaPredicted RBP13.56□□□□□ -0.24
MRPL28-209ENST00000481453 SORL1Q92673 2214 aa13.56□□□□□ -0.24
MRPL28-209ENST00000481453 NDUFA7O95182 113 aa13.55□□□□□ -0.24
MRPL28-209ENST00000481453 CYSLTR1Q9Y271 337 aa13.55□□□□□ -0.24
MRPL28-209ENST00000481453 A0A087WWL8 130 aa13.55□□□□□ -0.24
MRPL28-209ENST00000481453 F5H697 171 aa13.55□□□□□ -0.24
MRPL28-209ENST00000481453 SUMO4Q6EEV6 95 aa13.55□□□□□ -0.24
MRPL28-209ENST00000481453 RBMY1BA6NDE4 496 aaKnown RBP13.54□□□□□ -0.24
MRPL28-209ENST00000481453 RBMY1EA6NEQ0 496 aaKnown RBP13.54□□□□□ -0.24
MRPL28-209ENST00000481453 RBMY1DP0C7P1 496 aaKnown RBP13.54□□□□□ -0.24
MRPL28-209ENST00000481453 C12orf74Q32Q52 190 aa13.54□□□□□ -0.24
MRPL28-209ENST00000481453 MAP6D1Q9H9H5 199 aa13.54□□□□□ -0.24
MRPL28-209ENST00000481453 ZNF256Q9Y2P7 627 aaPredicted RBP13.54□□□□□ -0.24
MRPL28-209ENST00000481453 OTOGQ6ZRI0 2925 aa13.54□□□□□ -0.24
MRPL28-209ENST00000481453 E9PLD3 99 aa13.54□□□□□ -0.24
MRPL28-209ENST00000481453 H3BMM0 161 aa13.54□□□□□ -0.24
MRPL28-209ENST00000481453 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
MRPL28-209ENST00000481453 TRBV7-3A0A075B6L6 115 aa13.53□□□□□ -0.24
MRPL28-209ENST00000481453 IGHV3-16A0A0C4DH30 117 aa13.53□□□□□ -0.24
MRPL28-209ENST00000481453 IGLL5B9A064 214 aa13.53□□□□□ -0.24
MRPL28-209ENST00000481453 DEFB104AQ8WTQ1 72 aa13.53□□□□□ -0.24
MRPL28-209ENST00000481453 PRADC1Q9BSG0 188 aa13.53□□□□□ -0.24
MRPL28-209ENST00000481453 TP53TG1Q9Y2A0 90 aa13.53□□□□□ -0.24
MRPL28-209ENST00000481453 ADARB2-AS1A8MUL3 147 aa13.52□□□□□ -0.24
MRPL28-209ENST00000481453 RBMY1A1P0DJD3 496 aaKnown RBP13.52□□□□□ -0.24
MRPL28-209ENST00000481453 RBMY1CP0DJD4 496 aa13.52□□□□□ -0.24
MRPL28-209ENST00000481453 POLR2KP53803 58 aaKnown RBP13.52□□□□□ -0.24
MRPL28-209ENST00000481453 PROK1P58294 105 aa13.52□□□□□ -0.24
MRPL28-209ENST00000481453 RBMY1FQ15415 496 aaKnown RBP13.52□□□□□ -0.24
MRPL28-209ENST00000481453 C9orf85Q96MD7 179 aa13.52□□□□□ -0.24
MRPL28-209ENST00000481453 HIVEP2P31629 2446 aa13.52□□□□□ -0.24
MRPL28-209ENST00000481453 VCYO14598 125 aa13.52□□□□□ -0.25
MRPL28-209ENST00000481453 ZFP2Q6ZN57 461 aa13.52□□□□□ -0.25
MRPL28-209ENST00000481453 KIR2DL4Q99706 377 aa13.52□□□□□ -0.25
MRPL28-209ENST00000481453 SPAG8Q99932 426 aaPredicted RBP13.52□□□□□ -0.25
MRPL28-209ENST00000481453 IGHV1OR15-1A0A075B7D0 117 aa13.51□□□□□ -0.25
MRPL28-209ENST00000481453 Q8N1Y9 231 aa13.51□□□□□ -0.25
MRPL28-209ENST00000481453 ZNF479Q96JC4 524 aa13.51□□□□□ -0.25
MRPL28-209ENST00000481453 MDFICQ9P1T7 246 aa13.51□□□□□ -0.25
MRPL28-209ENST00000481453 G3V4G9 280 aa13.51□□□□□ -0.25
MRPL28-209ENST00000481453 LINC01549A6NIU2 74 aa13.5□□□□□ -0.25
MRPL28-209ENST00000481453 TSHBP01222 138 aa13.5□□□□□ -0.25
MRPL28-209ENST00000481453 CRYGDP07320 174 aa13.5□□□□□ -0.25
MRPL28-209ENST00000481453 FAM74A4Q5TZK3 123 aa13.5□□□□□ -0.25
MRPL28-209ENST00000481453 ZNF815PA8K554 130 aa13.49□□□□□ -0.25
MRPL28-209ENST00000481453 TRAV25A0A0B4J276 109 aa13.49□□□□□ -0.25
MRPL28-209ENST00000481453 SDHAF1A6NFY7 115 aa13.49□□□□□ -0.25
MRPL28-209ENST00000481453 IGIPA6NJ69 53 aa13.49□□□□□ -0.25
MRPL28-209ENST00000481453 RPL39P62891 51 aaKnown RBP13.49□□□□□ -0.25
MRPL28-209ENST00000481453 COTL1Q14019 142 aa13.48□□□□□ -0.25
MRPL28-209ENST00000481453 ODF3L2Q3SX64 289 aa13.48□□□□□ -0.25
MRPL28-209ENST00000481453 EMP1P54849 157 aa13.48□□□□□ -0.25
MRPL28-209ENST00000481453 PMVKQ15126 192 aa13.48□□□□□ -0.25
MRPL28-209ENST00000481453 SCGB1D4Q6XE38 83 aa13.48□□□□□ -0.25
MRPL28-209ENST00000481453 SYT8Q8NBV8 401 aa13.48□□□□□ -0.25
MRPL28-209ENST00000481453 C11orf86A6NJI1 115 aa13.47□□□□□ -0.25
MRPL28-209ENST00000481453 INAFM1C9JVW0 142 aa13.47□□□□□ -0.25
MRPL28-209ENST00000481453 PAPPA-AS1Q5QFB9 102 aa13.47□□□□□ -0.25
MRPL28-209ENST00000481453 TMEM141Q96I45 108 aa13.47□□□□□ -0.25
MRPL28-209ENST00000481453 NOTCH2Q04721 2471 aa13.47□□□□□ -0.25
MRPL28-209ENST00000481453 IGLV4-69A0A075B6H9 119 aa13.47□□□□□ -0.25
MRPL28-209ENST00000481453 KRTAP10-3P60369 221 aa13.47□□□□□ -0.25
MRPL28-209ENST00000481453 RPL24P83731 157 aaKnown RBP13.47□□□□□ -0.25
MRPL28-209ENST00000481453 ZNF56Q15929 161 aa13.47□□□□□ -0.25
MRPL28-209ENST00000481453 TRBV27A0A0K0K1C4 114 aa13.46□□□□□ -0.25
MRPL28-209ENST00000481453 A0A1B0GWB2 263 aa13.46□□□□□ -0.25
MRPL28-209ENST00000481453 RIPPLY3P57055 190 aa13.46□□□□□ -0.25
MRPL28-209ENST00000481453 TIMM17AQ99595 171 aa13.46□□□□□ -0.25
MRPL28-209ENST00000481453 TRBV6-5A0A0K0K1A5 114 aa13.45□□□□□ -0.26
MRPL28-209ENST00000481453 HERVK_113P61574 105 aa13.45□□□□□ -0.26
MRPL28-209ENST00000481453 RRN3P1Q2M238 152 aa13.45□□□□□ -0.26
MRPL28-209ENST00000481453 WNK1Q9H4A3 2382 aa13.45□□□□□ -0.26
MRPL28-209ENST00000481453 PLEKHB2Q96CS7 222 aa13.45□□□□□ -0.26
MRPL28-209ENST00000481453 SETD2Q9BYW2 2564 aaPredicted RBP13.45□□□□□ -0.26
MRPL28-209ENST00000481453 SRSF9Q13242 221 aaKnown RBP eCLIP13.44□□□□□ -0.26
MRPL28-209ENST00000481453 NSUN5P1Q3KNT7 163 aa13.44□□□□□ -0.26
MRPL28-209ENST00000481453 TRGV11A0A075B6L2 103 aa13.43□□□□□ -0.26
MRPL28-209ENST00000481453 M0QY20 66 aa13.43□□□□□ -0.26
MRPL28-209ENST00000481453 SETXQ7Z333 2677 aaKnown RBP13.43□□□□□ -0.26
MRPL28-209ENST00000481453 H3BMG7 143 aa13.43□□□□□ -0.26
MRPL28-209ENST00000481453 MORN3Q6PF18 240 aaPredicted RBP13.43□□□□□ -0.26
MRPL28-209ENST00000481453 CLUHP3Q96NS8 147 aa13.43□□□□□ -0.26
MRPL28-209ENST00000481453 TEX48A0A1B0GUV7 120 aa13.42□□□□□ -0.26
MRPL28-209ENST00000481453 TMEM238LA0A1B0GVL6 79 aa13.42□□□□□ -0.26
MRPL28-209ENST00000481453 A6NJY4 79 aa13.42□□□□□ -0.26
MRPL28-209ENST00000481453 F8W1H4 67 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 260 ms