RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 WFDC2Q14508 124 aa7.26□□□□□ -1.25
GARNL3-216ENST00000481242 SUMO4Q6EEV6 95 aa7.26□□□□□ -1.25
GARNL3-216ENST00000481242 Q8N1Y9 231 aa7.26□□□□□ -1.25
GARNL3-216ENST00000481242 RBMY1FQ15415 496 aaKnown RBP7.26□□□□□ -1.25
GARNL3-216ENST00000481242 PIEZO2Q9H5I5 2752 aa7.26□□□□□ -1.25
GARNL3-216ENST00000481242 DEFB135Q30KP9 77 aa7.26□□□□□ -1.25
GARNL3-216ENST00000481242 ZNF747Q9BV97 191 aa7.26□□□□□ -1.25
GARNL3-216ENST00000481242 UBL5Q9BZL1 73 aa7.26□□□□□ -1.25
GARNL3-216ENST00000481242 IGLV2-14P01704 120 aa7.26□□□□□ -1.25
GARNL3-216ENST00000481242 HIST1H4AP62805 103 aaKnown RBP7.26□□□□□ -1.25
GARNL3-216ENST00000481242 H3BQ85 93 aa7.25□□□□□ -1.25
GARNL3-216ENST00000481242 P0C879 139 aa7.25□□□□□ -1.25
GARNL3-216ENST00000481242 AMTNQ6UX39 209 aa7.25□□□□□ -1.25
GARNL3-216ENST00000481242 Q6ZQT7 251 aa7.25□□□□□ -1.25
GARNL3-216ENST00000481242 SPATA12Q7Z6I5 190 aa7.25□□□□□ -1.25
GARNL3-216ENST00000481242 MED12LQ86YW9 2145 aa7.25□□□□□ -1.25
GARNL3-216ENST00000481242 NUPR1O60356 82 aa7.25□□□□□ -1.25
GARNL3-216ENST00000481242 F8W735 103 aaPredicted RBP7.25□□□□□ -1.25
GARNL3-216ENST00000481242 C14orf177Q52M58 125 aa7.25□□□□□ -1.25
GARNL3-216ENST00000481242 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.24□□□□□ -1.25
GARNL3-216ENST00000481242 IGKV2-29A2NJV5 120 aaPredicted RBP7.24□□□□□ -1.25
GARNL3-216ENST00000481242 MRPL36Q9P0J6 103 aaKnown RBP7.24□□□□□ -1.25
GARNL3-216ENST00000481242 NDUFA1O15239 70 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 CLPSL2Q6UWE3 100 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 ZFP2Q6ZN57 461 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 DSCR8Q96T75 97 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 IMUPQ9GZP8 106 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 Q9H8V8 135 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 MAP6D1Q9H9H5 199 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 PCDH15Q96QU1 1955 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 TRAV4A0A0B4J268 109 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 ETDCA0A1B0GVM5 59 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 LYRM9A8MSI8 78 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 TIMM17AQ99595 171 aa7.24□□□□□ -1.25
GARNL3-216ENST00000481242 KIAA1549LQ6ZVL6 1849 aa7.23□□□□□ -1.25
GARNL3-216ENST00000481242 SPRY2O43597 315 aa7.23□□□□□ -1.25
GARNL3-216ENST00000481242 ZFYVE26Q68DK2 2539 aa7.23□□□□□ -1.25
GARNL3-216ENST00000481242 FGF6P10767 208 aa7.23□□□□□ -1.25
GARNL3-216ENST00000481242 C5orf38Q86SI9 138 aa7.23□□□□□ -1.25
GARNL3-216ENST00000481242 UNQ9165/PRO28630Q6UXU0 137 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 M0QXV9 152 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 MORN5Q5VZ52 161 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 INAFM1C9JVW0 142 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 H0YGX0 51 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 CCDC140Q96MF4 163 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 KMT2EQ8IZD2 1858 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 K7EQG2 157 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 C11orf45Q8TAV5 145 aa7.22□□□□□ -1.25
GARNL3-216ENST00000481242 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
GARNL3-216ENST00000481242 A4D1N5 150 aa7.21□□□□□ -1.25
GARNL3-216ENST00000481242 E7EUB6 86 aa7.21□□□□□ -1.25
GARNL3-216ENST00000481242 TIRAPP58753 221 aa7.21□□□□□ -1.25
GARNL3-216ENST00000481242 ALPK3Q96L96 1907 aa7.21□□□□□ -1.25
GARNL3-216ENST00000481242 HILS1P60008 231 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 DEFB114Q30KQ6 69 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 Q6ZSV7 163 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 GTSF1Q8WW33 167 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 C2CD3Q4AC94 2353 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 TRAV12-1A0A0B4J245 112 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 E9PLD3 99 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 PSMG3-AS1Q96PY0 264 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 JMJD1CQ15652 2540 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 LY6LH3BQJ8 138 aa7.21□□□□□ -1.26
GARNL3-216ENST00000481242 H3BT86 120 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 CRIP3Q6Q6R5 217 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 PROP1O75360 226 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 IGHV3-30P01768 117 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 IGHV3-33P01772 117 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 MT-ATP8P03928 68 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 IGHV3-30-3P0DP02 117 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 IGHV3-30-5P0DP03 117 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 RPL39LQ96EH5 51 aaKnown RBP7.2□□□□□ -1.26
GARNL3-216ENST00000481242 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
GARNL3-216ENST00000481242 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
GARNL3-216ENST00000481242 DKK2Q9UBU2 259 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 FAM236AA0A1B0GUQ0 79 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 FAM236BA0A1B0GV22 79 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 C22orf34Q6ZV56 151 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 COX7B2Q8TF08 81 aa7.2□□□□□ -1.26
GARNL3-216ENST00000481242 A0A0B4J2C4 111 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 NDUFA7O95182 113 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 TRBV12-3P01733 135 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 MIFP14174 115 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 RPL18AQ02543 176 aaKnown RBP7.19□□□□□ -1.26
GARNL3-216ENST00000481242 HIST2H2BCQ6DN03 193 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 UFSP1Q6NVU6 142 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 LINC00643Q86TS7 51 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 MBD6Q96DN6 1003 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 VSIG2Q96IQ7 327 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 IGKV1D-37A0A075B6S9 117 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 CRYGBP07316 175 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 CFC1BP0CG36 223 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 CFC1P0CG37 223 aa7.19□□□□□ -1.26
GARNL3-216ENST00000481242 PLA2G2AP14555 144 aa7.18□□□□□ -1.26
GARNL3-216ENST00000481242 MSRB1Q9NZV6 116 aa7.18□□□□□ -1.26
GARNL3-216ENST00000481242 A0A0J9YXV3 536 aa7.18□□□□□ -1.26
GARNL3-216ENST00000481242 GATA1P15976 413 aaPredicted RBP7.18□□□□□ -1.26
GARNL3-216ENST00000481242 FUSP35637 526 aaKnown RBP eCLIP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms