RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SPATA45Q537H7 98 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 DEFB119Q8N690 84 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 COPS9Q8WXC6 57 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 MRPL57Q9BQC6 102 aaKnown RBP2.07□□□□□ -2.08
COPA-203ENST00000481040 SEC11CQ9BY50 192 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 BOKQ9UMX3 212 aaPredicted RBP2.07□□□□□ -2.08
COPA-203ENST00000481040 C22orf24Q9Y442 160 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 ASPMQ8IZT6 3477 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 MUC6Q6W4X9 2439 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 MAGI2Q86UL8 1455 aa2.07□□□□□ -2.08
COPA-203ENST00000481040 TIAM1Q13009 1591 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 ZGRF1Q86YA3 2104 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 PREX2Q70Z35 1606 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 SORL1Q92673 2214 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 ITSN2Q9NZM3 1697 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 SPAARA0A1B0GVQ0 90 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 PIRTP0C851 137 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 AKAIN1P0CW23 69 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 BTG2P78543 158 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 OR2T2Q6IF00 324 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 DMAC1Q96GE9 116 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 ODF3Q96PU9 254 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 AGPAT4-IT1Q9H0P7 198 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 ATG5Q9H1Y0 275 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 COA4Q9NYJ1 87 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 NDUFA12Q9UI09 145 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 TET1Q8NFU7 2136 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 ABCC5O15440 1437 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 ZDBF2Q9HCK1 2354 aa2.06□□□□□ -2.08
COPA-203ENST00000481040 MED13Q9UHV7 2174 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 CXorf51AA0A1B0GTR3 108 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 CCDC179H3BU77 68 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 CORTO00230 105 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 IL5P05113 134 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 SLC25A6P12236 298 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 SPANXN1Q5VSR9 72 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 C10orf105Q8TEF2 133 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 PP6455Q8WZ26 134 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 RERGLQ9H628 205 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 TMEM242Q9NWH2 141 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 SCN3BQ9NY72 215 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 CCNB3Q8WWL7 1395 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 AGLP35573 1532 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 ABCA9Q8IUA7 1624 aa2.05□□□□□ -2.08
COPA-203ENST00000481040 DNAH12Q6ZR08 3092 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 SPEGQ15772 3267 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 XIRP2A4UGR9 3374 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 TRBV10-1A0A0K0K1A3 114 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 TFF1P04155 84 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 SMIM6P0DI80 62 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 RPL37AP61513 92 aaKnown RBP2.04□□□□□ -2.08
COPA-203ENST00000481040 MRPS10P82664 201 aaKnown RBP2.04□□□□□ -2.08
COPA-203ENST00000481040 DOPEY1Q5JWR5 2465 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 C10orf71Q711Q0 1435 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.04□□□□□ -2.08
COPA-203ENST00000481040 SPTSSAQ969W0 71 aa2.04□□□□□ -2.08
COPA-203ENST00000481040 KDM5AP29375 1690 aaKnown RBP2.03□□□□□ -2.08
COPA-203ENST00000481040 MAST1Q9Y2H9 1570 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 ABCC3O15438 1527 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 A2ML1A8K2U0 1454 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 ITPR3Q14573 2671 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 PIPP12273 146 aaPredicted RBP2.03□□□□□ -2.08
COPA-203ENST00000481040 RBP2P50120 134 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 SBSPONQ8IVN8 264 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 DNAH14Q0VDD8 3507 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 HTTP42858 3142 aa2.03□□□□□ -2.08
COPA-203ENST00000481040 E9PCH4 1651 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 NRXN3Q9Y4C0 1643 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 FAM208BQ5VWN6 2430 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 ATP7AQ04656 1500 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 UACAQ9BZF9 1416 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 SPTBN4Q9H254 2564 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 C20orf202A1L168 122 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 NDUFB6O95139 128 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 NAA60Q9H7X0 242 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 MRPL35Q9NZE8 188 aaKnown RBP2.02□□□□□ -2.09
COPA-203ENST00000481040 CDH23Q9H251 3354 aa2.02□□□□□ -2.09
COPA-203ENST00000481040 CNTLNQ9NXG0 1405 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 RELNP78509 3460 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 SNCGO76070 127 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 FXYD4P59646 89 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 TMEM141Q96I45 108 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 PPP3R2Q96LZ3 170 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 SERP1Q9Y6X1 66 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 WDFY4Q6ZS81 3184 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 DIP2CQ9Y2E4 1556 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 ABCC1P33527 1531 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 NEXMIFQ5QGS0 1516 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 ABCA12Q86UK0 2595 aa2.01□□□□□ -2.09
COPA-203ENST00000481040 RGPD3A6NKT7 1758 aaPredicted RBP2□□□□□ -2.09
COPA-203ENST00000481040 RGPD4Q7Z3J3 1758 aa2□□□□□ -2.09
COPA-203ENST00000481040 MARF1Q9Y4F3 1742 aaKnown RBP2□□□□□ -2.09
COPA-203ENST00000481040 CCKP06307 115 aa2□□□□□ -2.09
COPA-203ENST00000481040 SLC48A1Q6P1K1 146 aa2□□□□□ -2.09
COPA-203ENST00000481040 LSM10Q969L4 123 aaKnown RBP2□□□□□ -2.09
COPA-203ENST00000481040 SAMD9LQ8IVG5 1584 aa2□□□□□ -2.09
COPA-203ENST00000481040 SNRNP200O75643 2136 aaKnown RBP2□□□□□ -2.09
COPA-203ENST00000481040 HECTD1Q9ULT8 2610 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms