RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 EVI2AP22794 236 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 SLAQ13239 276 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 FHL2Q14192 279 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 OR10J3Q5JRS4 329 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 ZNF479Q96JC4 524 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 MSRB1Q9NZV6 116 aa8.5□□□□□ -1.05
PTPRF-213ENST00000481019 PHOX2AO14813 284 aa8.49□□□□□ -1.05
PTPRF-213ENST00000481019 ZFP2Q6ZN57 461 aa8.49□□□□□ -1.05
PTPRF-213ENST00000481019 AMN1Q8IY45 258 aa8.49□□□□□ -1.05
PTPRF-213ENST00000481019 C14orf178Q8N769 122 aaPredicted RBP8.49□□□□□ -1.05
PTPRF-213ENST00000481019 C15orf53Q8NAA6 179 aa8.49□□□□□ -1.05
PTPRF-213ENST00000481019 F5H697 171 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BKO60814 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BJP06899 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BOP23527 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 SRIP30626 198 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BBP33778 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BDP58876 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BCP62807 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 Q0VG73 95 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST2H2BEQ16778 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BHQ93079 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BNQ99877 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 HIST1H2BMQ99879 126 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 ALKBH7Q9BT30 221 aaPredicted RBP8.48□□□□□ -1.05
PTPRF-213ENST00000481019 TMA7Q9Y2S6 64 aaKnown RBP8.48□□□□□ -1.05
PTPRF-213ENST00000481019 LINC00588Q9Y4M8 146 aa8.48□□□□□ -1.05
PTPRF-213ENST00000481019 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
PTPRF-213ENST00000481019 A0A096LPF7 62 aa8.47□□□□□ -1.05
PTPRF-213ENST00000481019 M0R2N4 97 aa8.47□□□□□ -1.05
PTPRF-213ENST00000481019 KIAA1644Q3SXP7 199 aa8.47□□□□□ -1.05
PTPRF-213ENST00000481019 BAGE3Q86Y29 109 aa8.47□□□□□ -1.05
PTPRF-213ENST00000481019 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
PTPRF-213ENST00000481019 OR4C5Q8NGB2 326 aa8.47□□□□□ -1.05
PTPRF-213ENST00000481019 PRELID3AQ96N28 172 aa8.47□□□□□ -1.05
PTPRF-213ENST00000481019 TRAV4A0A0B4J268 109 aa8.46□□□□□ -1.06
PTPRF-213ENST00000481019 D6R8Y8 96 aa8.46□□□□□ -1.06
PTPRF-213ENST00000481019 RS1O15537 224 aa8.46□□□□□ -1.06
PTPRF-213ENST00000481019 CRYGDP07320 174 aa8.46□□□□□ -1.06
PTPRF-213ENST00000481019 MGPP08493 103 aa8.46□□□□□ -1.06
PTPRF-213ENST00000481019 CRYBA4P53673 196 aa8.46□□□□□ -1.06
PTPRF-213ENST00000481019 ESRGQ1W209 222 aa8.46□□□□□ -1.06
PTPRF-213ENST00000481019 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
PTPRF-213ENST00000481019 H3BNG1 76 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 PAX4O43316 350 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 NDUFA6P56556 154 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 ZNF56Q15929 161 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
PTPRF-213ENST00000481019 FAM74A4Q5TZK3 123 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 CFAP126Q5VTH2 177 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 MAP1LC3AQ9H492 121 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 JPT2Q9H910 190 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 HHLA3Q9XRX5 114 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 KIF25-AS1Q9Y6Z4 181 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 PKHD1P08F94 4074 aa8.45□□□□□ -1.06
PTPRF-213ENST00000481019 A0A087WWL8 130 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 IGHV3-73A0A0B4J1V6 119 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 LOC100131303A0A0U1RQF7 123 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 TCAPO15273 167 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 G0S2P27469 103 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 Q6ZSN1 163 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 PRSS3P2Q8NHM4 247 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
PTPRF-213ENST00000481019 PRO0255Q9UI72 69 aa8.44□□□□□ -1.06
PTPRF-213ENST00000481019 TRGV4A0A0C4DH28 118 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 PRSS47A8MTI9 375 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 K7EMI3 77 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 TNFRSF6BO95407 300 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 PMCHP20382 165 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 S100A2P29034 98 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 LINC00315P59091 139 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 Q6ZR54 194 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 C18orf32Q8TCD1 76 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
PTPRF-213ENST00000481019 DNAJC30Q96LL9 226 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 SAMD10Q9BYL1 202 aa8.43□□□□□ -1.06
PTPRF-213ENST00000481019 TRBV10-1A0A0K0K1A3 114 aa8.42□□□□□ -1.06
PTPRF-213ENST00000481019 GATA1P15976 413 aaPredicted RBP8.42□□□□□ -1.06
PTPRF-213ENST00000481019 RPL32P62910 135 aaKnown RBP8.42□□□□□ -1.06
PTPRF-213ENST00000481019 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
PTPRF-213ENST00000481019 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
PTPRF-213ENST00000481019 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
PTPRF-213ENST00000481019 DNAH5Q8TE73 4624 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 TRBV6-5A0A0K0K1A5 114 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 C5orf52A6NGY3 159 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 K7EQD1 137 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 VCYO14598 125 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 LINC00614P0C842 121 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 GYPEP15421 78 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 CCL18P55774 89 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 SUMO2P61956 95 aaKnown RBP8.41□□□□□ -1.06
PTPRF-213ENST00000481019 SUMO4Q6EEV6 95 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 UFSP1Q6NVU6 142 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 Q9UF83 564 aa8.41□□□□□ -1.06
PTPRF-213ENST00000481019 TNFRSF18Q9Y5U5 241 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms