RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 TMSB15BA0A087X1C1 80 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 TRBV6-4A0A1B0GX49 114 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 CIDEAO60543 219 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 PAGE4O60829 102 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 CDK2AP2O75956 126 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 CRYGDP07320 174 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 ARMS2P0C7Q2 107 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 SEC11BP0C7V7 166 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 MGST1P10620 155 aaKnown RBP4.11□□□□□ -1.75
VPS50-215ENST00000480943 FUSP35637 526 aaKnown RBP eCLIP4.11□□□□□ -1.75
VPS50-215ENST00000480943 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 MAPKAPK5-AS1Q8N8E1 139 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 SFT2D1Q8WV19 159 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 PTH2Q96A98 100 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 JPT2Q9H910 190 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 SCRT2Q9NQ03 307 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 ZFP30Q9Y2G7 519 aa4.11□□□□□ -1.75
VPS50-215ENST00000480943 A0A087WTM6 91 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 TRAV8-6A0A0B4J262 113 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 IGHV3-38A0A0C4DH36 116 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 A0A0D9SG52 128 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 TRBV6-1A0A0K0K1D8 114 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 HMSDA8MTL9 139 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 A8MWV9 139 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 UMAD1C9J7I0 102 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 KRBOX1C9JBD0 128 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 PFDN1O60925 122 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 LTAP01374 205 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 IGHV3-30P01768 117 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 IGHV3-33P01772 117 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 IGHV3-30-3P0DP02 117 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 IGHV3-30-5P0DP03 117 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 TPT1P13693 172 aaKnown RBP4.1□□□□□ -1.75
VPS50-215ENST00000480943 CRIP1P50238 77 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 GAGE5Q13069 117 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 FAM162BQ5T6X4 162 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 FAM74A4Q5TZK3 123 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 ZFP2Q6ZN57 461 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 COX8CQ7Z4L0 72 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 C10orf126Q8N4M7 172 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 ATP6V0E2Q8NHE4 81 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 TCEAL7Q9BRU2 100 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 SAMD10Q9BYL1 202 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 IL36BQ9NZH7 164 aa4.1□□□□□ -1.75
VPS50-215ENST00000480943 K7EP13 123 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 M0R381 172 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 PSCAO43653 123 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 PRSS1P07477 247 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 LINC01547P58512 204 aaPredicted RBP4.09□□□□□ -1.75
VPS50-215ENST00000480943 EIF5AP63241 154 aaKnown RBP4.09□□□□□ -1.75
VPS50-215ENST00000480943 RPL19P84098 196 aaKnown RBP4.09□□□□□ -1.75
VPS50-215ENST00000480943 ZNF674Q2M3X9 581 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 LINC01556Q5JQF7 62 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 DNLZQ5SXM8 178 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 LELP1Q5T871 98 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 TMUB2Q71RG4 321 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 C14orf178Q8N769 122 aaPredicted RBP4.09□□□□□ -1.75
VPS50-215ENST00000480943 MBD3L1Q8WWY6 194 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 GTSF1LQ9H1H1 148 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 Q9HAA7 133 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 PHLDA3Q9Y5J5 127 aa4.09□□□□□ -1.75
VPS50-215ENST00000480943 LINC00694P0DN24 101 aa4.08□□□□□ -1.76
VPS50-215ENST00000480943 PRR27Q6MZM9 219 aa4.08□□□□□ -1.76
VPS50-215ENST00000480943 UFSP1Q6NVU6 142 aa4.08□□□□□ -1.76
VPS50-215ENST00000480943 ZFP82Q8N141 532 aa4.08□□□□□ -1.76
VPS50-215ENST00000480943 SFRP2Q96HF1 295 aa4.08□□□□□ -1.76
VPS50-215ENST00000480943 Q9UF83 564 aa4.08□□□□□ -1.76
VPS50-215ENST00000480943 MUC21A0A0G2JKD1 596 aa4.07□□□□□ -1.76
VPS50-215ENST00000480943 MUC21A0A140T8X8 626 aa4.07□□□□□ -1.76
VPS50-215ENST00000480943 IBA57-AS1B1ANH7 110 aa4.07□□□□□ -1.76
VPS50-215ENST00000480943 USP17L23D6RBM5 183 aa4.07□□□□□ -1.76
VPS50-215ENST00000480943 S100A9P06702 114 aaKnown RBP4.07□□□□□ -1.76
VPS50-215ENST00000480943 BAGE2Q86Y30 109 aa4.07□□□□□ -1.76
VPS50-215ENST00000480943 OR10AG1Q8NH19 301 aa4.07□□□□□ -1.76
VPS50-215ENST00000480943 MANBALQ9NQG1 85 aa4.07□□□□□ -1.76
VPS50-215ENST00000480943 GNG13Q9P2W3 67 aa4.07□□□□□ -1.76
VPS50-215ENST00000480943 CXCL1P09341 107 aa4.06□□□□□ -1.76
VPS50-215ENST00000480943 RPL35P42766 123 aaKnown RBP4.06□□□□□ -1.76
VPS50-215ENST00000480943 KRTAP10-1P60331 282 aa4.06□□□□□ -1.76
VPS50-215ENST00000480943 SSTP61278 116 aa4.06□□□□□ -1.76
VPS50-215ENST00000480943 CCL20P78556 96 aa4.06□□□□□ -1.76
VPS50-215ENST00000480943 ZNF56Q15929 161 aa4.06□□□□□ -1.76
VPS50-215ENST00000480943 SPANXN1Q5VSR9 72 aa4.06□□□□□ -1.76
VPS50-215ENST00000480943 DAZ4Q86SG3 579 aaKnown RBP4.06□□□□□ -1.76
VPS50-215ENST00000480943 C11orf52Q96A22 123 aa4.06□□□□□ -1.76
VPS50-215ENST00000480943 DERL1Q9BUN8 251 aa4.06□□□□□ -1.76
VPS50-215ENST00000480943 DAZ3Q9NR90 486 aaKnown RBP4.06□□□□□ -1.76
VPS50-215ENST00000480943 A0A087WWC5 75 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 LRCOL1A6NCL2 159 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 TEX46H3BTG2 121 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 VCYO14598 125 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 SNAI2O43623 268 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 SULT1A2P50226 295 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 RAB5CP51148 216 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 LAGE3Q14657 143 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 CENPWQ5EE01 88 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 EIF5AL1Q6IS14 154 aaKnown RBP4.05□□□□□ -1.76
VPS50-215ENST00000480943 TCTE3Q8IZS6 198 aa4.05□□□□□ -1.76
VPS50-215ENST00000480943 URGCP-MRPS24S4R325 110 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms