RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 Q6ZNX1 250 aa9.84□□□□□ -0.83
LIMS4-202ENST00000480598 FER1L6-AS1Q8NA97 138 aa9.84□□□□□ -0.83
LIMS4-202ENST00000480598 DAZAP1Q96EP5 407 aaKnown RBP9.84□□□□□ -0.83
LIMS4-202ENST00000480598 AP1S3Q96PC3 154 aa9.84□□□□□ -0.83
LIMS4-202ENST00000480598 MED9Q9NWA0 146 aa9.84□□□□□ -0.83
LIMS4-202ENST00000480598 FAM30AQ9NZY2 134 aa9.84□□□□□ -0.83
LIMS4-202ENST00000480598 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
LIMS4-202ENST00000480598 PDE6DO43924 150 aa9.83□□□□□ -0.84
LIMS4-202ENST00000480598 SMIM17P0DL12 118 aa9.83□□□□□ -0.84
LIMS4-202ENST00000480598 KCNIP4Q6PIL6 250 aa9.83□□□□□ -0.84
LIMS4-202ENST00000480598 RMI2Q96E14 147 aa9.83□□□□□ -0.84
LIMS4-202ENST00000480598 TMEM70Q9BUB7 260 aa9.83□□□□□ -0.84
LIMS4-202ENST00000480598 CHCHD7Q9BUK0 85 aa9.83□□□□□ -0.84
LIMS4-202ENST00000480598 VPS13BQ7Z7G8 4022 aa9.82□□□□□ -0.84
LIMS4-202ENST00000480598 hCG_2014768A0A024R1R8 64 aa9.82□□□□□ -0.84
LIMS4-202ENST00000480598 MGPP08493 103 aa9.82□□□□□ -0.84
LIMS4-202ENST00000480598 RPS20P60866 119 aaKnown RBP9.82□□□□□ -0.84
LIMS4-202ENST00000480598 FRZBQ92765 325 aa9.82□□□□□ -0.84
LIMS4-202ENST00000480598 SMIM12Q96EX1 92 aa9.82□□□□□ -0.84
LIMS4-202ENST00000480598 VAX2Q9UIW0 290 aa9.82□□□□□ -0.84
LIMS4-202ENST00000480598 COX11Q9Y6N1 276 aa9.82□□□□□ -0.84
LIMS4-202ENST00000480598 P01737 135 aa9.81□□□□□ -0.84
LIMS4-202ENST00000480598 ELOBQ15370 118 aa9.81□□□□□ -0.84
LIMS4-202ENST00000480598 MPV17L2Q567V2 206 aa9.81□□□□□ -0.84
LIMS4-202ENST00000480598 NTM-AS1Q6ZSK4 140 aa9.81□□□□□ -0.84
LIMS4-202ENST00000480598 C9orf62Q8N4C0 152 aa9.81□□□□□ -0.84
LIMS4-202ENST00000480598 C15orf54Q8N8G6 183 aa9.81□□□□□ -0.84
LIMS4-202ENST00000480598 AKAP14Q86UN6 197 aa9.8□□□□□ -0.84
LIMS4-202ENST00000480598 CHCHD5Q9BSY4 110 aa9.8□□□□□ -0.84
LIMS4-202ENST00000480598 M0QY20 66 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 INAFM2P0DMQ5 153 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 CACNG7P62955 275 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 LINC01620Q4KN68 170 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 SUMO4Q6EEV6 95 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 ATRAIDQ6UW56 229 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 LYZL1Q6UWQ5 148 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 ENHOQ6UWT2 76 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 Q8N976 141 aa9.79□□□□□ -0.84
LIMS4-202ENST00000480598 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.79□□□□□ -0.84
LIMS4-202ENST00000480598 XKRY2A2RUG3 117 aa9.78□□□□□ -0.84
LIMS4-202ENST00000480598 ANGP03950 147 aaKnown RBP9.78□□□□□ -0.84
LIMS4-202ENST00000480598 Q0VG73 95 aa9.78□□□□□ -0.84
LIMS4-202ENST00000480598 NUDT10Q8NFP7 164 aa9.78□□□□□ -0.84
LIMS4-202ENST00000480598 NUDT11Q96G61 164 aa9.78□□□□□ -0.84
LIMS4-202ENST00000480598 BIN3Q9NQY0 253 aa9.78□□□□□ -0.84
LIMS4-202ENST00000480598 F2Z2F3 143 aa9.77□□□□□ -0.85
LIMS4-202ENST00000480598 CRPP02741 224 aa9.77□□□□□ -0.85
LIMS4-202ENST00000480598 TAGLN2P37802 199 aaKnown RBP9.77□□□□□ -0.85
LIMS4-202ENST00000480598 GAGE6Q13070 117 aa9.77□□□□□ -0.85
LIMS4-202ENST00000480598 TMEM97Q5BJF2 176 aa9.77□□□□□ -0.85
LIMS4-202ENST00000480598 ALKAL2Q6UX46 152 aa9.77□□□□□ -0.85
LIMS4-202ENST00000480598 C1orf43Q9BWL3 253 aa9.77□□□□□ -0.85
LIMS4-202ENST00000480598 RNASE7Q9H1E1 156 aaKnown RBP9.77□□□□□ -0.85
LIMS4-202ENST00000480598 K7EN84 100 aa9.76□□□□□ -0.85
LIMS4-202ENST00000480598 NTF3P20783 257 aa9.76□□□□□ -0.85
LIMS4-202ENST00000480598 NKX2-5P52952 324 aaPredicted RBP9.76□□□□□ -0.85
LIMS4-202ENST00000480598 CLPSL2Q6UWE3 100 aa9.76□□□□□ -0.85
LIMS4-202ENST00000480598 Q6ZSA8 131 aa9.76□□□□□ -0.85
LIMS4-202ENST00000480598 OCC1Q8TAD7 63 aa9.76□□□□□ -0.85
LIMS4-202ENST00000480598 TRBV25-1A0A075B6N4 114 aa9.75□□□□□ -0.85
LIMS4-202ENST00000480598 FAM229AH3BQW9 127 aa9.75□□□□□ -0.85
LIMS4-202ENST00000480598 H7C1H1 209 aa9.75□□□□□ -0.85
LIMS4-202ENST00000480598 TRGC1P0CF51 173 aa9.75□□□□□ -0.85
LIMS4-202ENST00000480598 CTRLP40313 264 aa9.75□□□□□ -0.85
LIMS4-202ENST00000480598 PKIAP61925 76 aa9.75□□□□□ -0.85
LIMS4-202ENST00000480598 RBX1P62877 108 aa9.75□□□□□ -0.85
LIMS4-202ENST00000480598 DPH3P1Q9H4G8 78 aa9.75□□□□□ -0.85
LIMS4-202ENST00000480598 RPP21Q9H633 154 aaKnown RBP9.75□□□□□ -0.85
LIMS4-202ENST00000480598 IGHV1-24A0A0C4DH33 117 aa9.74□□□□□ -0.85
LIMS4-202ENST00000480598 IQCJQ1A5X6 159 aa9.74□□□□□ -0.85
LIMS4-202ENST00000480598 RASL11AQ6T310 242 aa9.74□□□□□ -0.85
LIMS4-202ENST00000480598 DEFB104AQ8WTQ1 72 aa9.74□□□□□ -0.85
LIMS4-202ENST00000480598 SRRM2Q9UQ35 2752 aaKnown RBP9.74□□□□□ -0.85
LIMS4-202ENST00000480598 FLG2Q5D862 2391 aaPredicted RBP9.73□□□□□ -0.85
LIMS4-202ENST00000480598 MYCBP2O75592 4640 aa9.73□□□□□ -0.85
LIMS4-202ENST00000480598 HLA-DQA1P01909 254 aa9.73□□□□□ -0.85
LIMS4-202ENST00000480598 BLOC1S1P78537 153 aa9.73□□□□□ -0.85
LIMS4-202ENST00000480598 TWIST1Q15672 202 aa9.73□□□□□ -0.85
LIMS4-202ENST00000480598 LINC00269Q8N2A0 174 aa9.73□□□□□ -0.85
LIMS4-202ENST00000480598 MIAQ16674 131 aa9.72□□□□□ -0.85
LIMS4-202ENST00000480598 WDR73Q6P4I2 378 aa9.72□□□□□ -0.85
LIMS4-202ENST00000480598 GTSF1Q8WW33 167 aa9.72□□□□□ -0.85
LIMS4-202ENST00000480598 CNFNQ9BYD5 112 aa9.72□□□□□ -0.85
LIMS4-202ENST00000480598 NIT2Q9NQR4 276 aa9.72□□□□□ -0.85
LIMS4-202ENST00000480598 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
LIMS4-202ENST00000480598 TMEM250H0YL14 139 aa9.71□□□□□ -0.86
LIMS4-202ENST00000480598 CEBPGP53567 150 aa9.71□□□□□ -0.86
LIMS4-202ENST00000480598 LYPD6BQ8NI32 183 aa9.71□□□□□ -0.86
LIMS4-202ENST00000480598 HERC1Q15751 4861 aa9.7□□□□□ -0.86
LIMS4-202ENST00000480598 TRAV26-2A0A0B4J265 109 aa9.7□□□□□ -0.86
LIMS4-202ENST00000480598 USP17L23D6RBM5 183 aa9.7□□□□□ -0.86
LIMS4-202ENST00000480598 C14orf177Q52M58 125 aa9.7□□□□□ -0.86
LIMS4-202ENST00000480598 KRTAP26-1Q6PEX3 210 aa9.7□□□□□ -0.86
LIMS4-202ENST00000480598 SCXQ7RTU7 201 aa9.7□□□□□ -0.86
LIMS4-202ENST00000480598 C20orf203Q8NBC4 194 aa9.7□□□□□ -0.86
LIMS4-202ENST00000480598 TMEM243Q9BU79 118 aa9.7□□□□□ -0.86
LIMS4-202ENST00000480598 IGLV4-60A0A075B6I1 120 aa9.69□□□□□ -0.86
LIMS4-202ENST00000480598 GATCO43716 136 aaKnown RBP9.69□□□□□ -0.86
LIMS4-202ENST00000480598 FOXA3P55318 350 aaPredicted RBP9.69□□□□□ -0.86
LIMS4-202ENST00000480598 LINC00528Q8N1L1 170 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms