RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 FAM3BP58499 235 aaPredicted RBP6.26□□□□□ -1.41
VCP-206ENST00000480327 GAGE1Q13065 139 aa6.26□□□□□ -1.41
VCP-206ENST00000480327 GAGE4Q13068 117 aa6.26□□□□□ -1.41
VCP-206ENST00000480327 GAGE5Q13069 117 aa6.26□□□□□ -1.41
VCP-206ENST00000480327 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
VCP-206ENST00000480327 GAGE13Q4V321 117 aa6.26□□□□□ -1.41
VCP-206ENST00000480327 C10orf91Q5T1B1 145 aa6.26□□□□□ -1.41
VCP-206ENST00000480327 ANAPC16Q96DE5 110 aa6.26□□□□□ -1.41
VCP-206ENST00000480327 CNFNQ9BYD5 112 aa6.26□□□□□ -1.41
VCP-206ENST00000480327 CARHSP1Q9Y2V2 147 aaKnown RBP6.26□□□□□ -1.41
VCP-206ENST00000480327 APOC3P02656 99 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 SRIP30626 198 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 CAMPP49913 170 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 LINC00315P59091 139 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 RAB4BP61018 213 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 RIGQ13278 110 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 ESRGQ1W209 222 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 MRPL54Q6P161 138 aaKnown RBP6.25□□□□□ -1.41
VCP-206ENST00000480327 SMIM15Q7Z3B0 74 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 DPH3P1Q9H4G8 78 aa6.25□□□□□ -1.41
VCP-206ENST00000480327 TRAV26-2A0A0B4J265 109 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 C7orf77A4D0Y5 90 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 CCL18P55774 89 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 SUMO4Q6EEV6 95 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 NEGR1Q7Z3B1 354 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 CLRN3Q8NCR9 226 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 ZNRF2Q8NHG8 242 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 RPS10P5Q9NQ39 176 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 LINC00588Q9Y4M8 146 aa6.24□□□□□ -1.41
VCP-206ENST00000480327 LYPD5Q6UWN5 251 aa6.23□□□□□ -1.41
VCP-206ENST00000480327 ATP6V0E2Q8NHE4 81 aa6.23□□□□□ -1.41
VCP-206ENST00000480327 IGHV3-38A0A0C4DH36 116 aa6.22□□□□□ -1.41
VCP-206ENST00000480327 M0QY20 66 aa6.22□□□□□ -1.41
VCP-206ENST00000480327 RPL36AP83881 106 aaKnown RBP6.22□□□□□ -1.41
VCP-206ENST00000480327 AMN1Q8IY45 258 aa6.22□□□□□ -1.41
VCP-206ENST00000480327 GATD1Q8NB37 220 aa6.22□□□□□ -1.41
VCP-206ENST00000480327 NEXN-AS1Q8NBZ9 246 aa6.22□□□□□ -1.41
VCP-206ENST00000480327 RPL36ALQ969Q0 106 aaKnown RBP6.22□□□□□ -1.41
VCP-206ENST00000480327 CTDSP1Q9GZU7 261 aa6.22□□□□□ -1.41
VCP-206ENST00000480327 TMEM191AQ9H0A3 160 aa6.22□□□□□ -1.41
VCP-206ENST00000480327 URGCP-MRPS24S4R325 110 aa6.22□□□□□ -1.41
VCP-206ENST00000480327 TRBV7-3A0A075B6L6 115 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 TRBV10-1A0A0K0K1A3 114 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 SMKR1H3BMG3 65 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 GAS8-AS1O95177 125 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 RAB4AP20338 218 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 HBBP68871 147 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 TNP2Q05952 138 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 RHEBQ15382 184 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 RASL11AQ6T310 242 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 SVBPQ8N300 66 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 DEFB104AQ8WTQ1 72 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 RPL39LQ96EH5 51 aaKnown RBP6.21□□□□□ -1.42
VCP-206ENST00000480327 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 TNFRSF18Q9Y5U5 241 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 FAT1Q14517 4588 aa6.21□□□□□ -1.42
VCP-206ENST00000480327 A0A1B0GXF2 115 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 H7C1H1 209 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 SNAPINO95295 136 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 NCR2O95944 276 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 LINC00694P0DN24 101 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 UBE2D3P61077 147 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 UBE2D2P62837 147 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 KCNIP4Q6PIL6 250 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 SH2D6Q7Z4S9 175 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 BTF3L4Q96K17 158 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
VCP-206ENST00000480327 MRPS16Q9Y3D3 137 aaKnown RBP6.2□□□□□ -1.42
VCP-206ENST00000480327 A0A087WWC5 75 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 A0A1B0GW15 77 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 S100A8P05109 93 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 S100PP25815 95 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 MRPL51Q4U2R6 128 aaKnown RBP6.19□□□□□ -1.42
VCP-206ENST00000480327 OR10J3Q5JRS4 329 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 C1orf134Q5TEV5 83 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 FAM104BQ5XKR9 115 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 ATRAIDQ6UW56 229 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 WFDC10BQ8IUB3 73 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 DNAJC30Q96LL9 226 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 IMMP2LQ96T52 175 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 NIT2Q9NQR4 276 aa6.19□□□□□ -1.42
VCP-206ENST00000480327 BTF3P20290 206 aaKnown RBP6.18□□□□□ -1.42
VCP-206ENST00000480327 RPS10P46783 165 aaKnown RBP6.18□□□□□ -1.42
VCP-206ENST00000480327 ATP5L2Q7Z4Y8 100 aa6.18□□□□□ -1.42
VCP-206ENST00000480327 Q9H8V8 135 aa6.18□□□□□ -1.42
VCP-206ENST00000480327 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
VCP-206ENST00000480327 TRAV8-6A0A0B4J262 113 aa6.17□□□□□ -1.42
VCP-206ENST00000480327 PCP4L1A6NKN8 68 aa6.17□□□□□ -1.42
VCP-206ENST00000480327 SIVA1O15304 175 aa6.17□□□□□ -1.42
VCP-206ENST00000480327 CDK2AP2O75956 126 aa6.17□□□□□ -1.42
VCP-206ENST00000480327 CKS2P33552 79 aa6.17□□□□□ -1.42
VCP-206ENST00000480327 LELP1Q5T871 98 aa6.17□□□□□ -1.42
VCP-206ENST00000480327 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.17□□□□□ -1.42
VCP-206ENST00000480327 MRAP2Q96G30 205 aa6.17□□□□□ -1.42
VCP-206ENST00000480327 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
VCP-206ENST00000480327 TGIF2-C20orf24A0A0A6YYL0 155 aa6.16□□□□□ -1.42
VCP-206ENST00000480327 NBDYA0A0U1RRE5 68 aa6.16□□□□□ -1.42
VCP-206ENST00000480327 C16orf90A8MZG2 172 aa6.16□□□□□ -1.42
VCP-206ENST00000480327 D6R8Y8 96 aa6.16□□□□□ -1.42
VCP-206ENST00000480327 TIRAPP58753 221 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms