RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TEP1Q99973 2627 aaKnown RBP7.94□□□□□ -1.14
VTI1A-204ENST00000480057 TRAV4A0A0B4J268 109 aa7.93□□□□□ -1.14
VTI1A-204ENST00000480057 PLAC8L1A1L4L8 177 aa7.93□□□□□ -1.14
VTI1A-204ENST00000480057 SDHAF1A6NFY7 115 aa7.93□□□□□ -1.14
VTI1A-204ENST00000480057 NUDT3O95989 172 aa7.93□□□□□ -1.14
VTI1A-204ENST00000480057 PRM2P04554 102 aa7.93□□□□□ -1.14
VTI1A-204ENST00000480057 RHOHQ15669 191 aa7.93□□□□□ -1.14
VTI1A-204ENST00000480057 LGALS9CQ6DKI2 356 aa7.93□□□□□ -1.14
VTI1A-204ENST00000480057 TRGV1A0A0A0MS02 117 aa7.92□□□□□ -1.14
VTI1A-204ENST00000480057 EGFEM1PQ0D2K5 195 aa7.92□□□□□ -1.14
VTI1A-204ENST00000480057 ZNF664Q8N3J9 261 aa7.92□□□□□ -1.14
VTI1A-204ENST00000480057 OR4C5Q8NGB2 326 aa7.92□□□□□ -1.14
VTI1A-204ENST00000480057 TOMM6Q96B49 74 aa7.92□□□□□ -1.14
VTI1A-204ENST00000480057 C18orf15Q96N68 181 aa7.92□□□□□ -1.14
VTI1A-204ENST00000480057 TRAV9-2A0A087WT02 112 aa7.91□□□□□ -1.14
VTI1A-204ENST00000480057 TRBV10-1A0A0K0K1A3 114 aa7.91□□□□□ -1.14
VTI1A-204ENST00000480057 A8MZ25 164 aa7.91□□□□□ -1.14
VTI1A-204ENST00000480057 I3L3M4 83 aa7.91□□□□□ -1.14
VTI1A-204ENST00000480057 RIPPLY3P57055 190 aa7.91□□□□□ -1.14
VTI1A-204ENST00000480057 JMJD1CQ15652 2540 aa7.91□□□□□ -1.14
VTI1A-204ENST00000480057 PCP4L1A6NKN8 68 aa7.9□□□□□ -1.14
VTI1A-204ENST00000480057 LINC00612Q8N6U2 182 aa7.9□□□□□ -1.14
VTI1A-204ENST00000480057 NOP10Q9NPE3 64 aaKnown RBP7.9□□□□□ -1.14
VTI1A-204ENST00000480057 CYSLTR1Q9Y271 337 aa7.9□□□□□ -1.14
VTI1A-204ENST00000480057 TNFRSF18Q9Y5U5 241 aa7.9□□□□□ -1.14
VTI1A-204ENST00000480057 ATRQ13535 2644 aa7.9□□□□□ -1.15
VTI1A-204ENST00000480057 TRAV12-1A0A0B4J245 112 aa7.89□□□□□ -1.15
VTI1A-204ENST00000480057 C2orf66Q6UXQ4 117 aa7.89□□□□□ -1.15
VTI1A-204ENST00000480057 Q6ZTI0 123 aa7.89□□□□□ -1.15
VTI1A-204ENST00000480057 ERASQ7Z444 233 aa7.89□□□□□ -1.15
VTI1A-204ENST00000480057 X6R8D5 127 aa7.89□□□□□ -1.15
VTI1A-204ENST00000480057 TENM1Q9UKZ4 2725 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 NACAE9PAV3 2078 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 IGHV3-73A0A0B4J1V6 119 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-204ENST00000480057 SPATA45Q537H7 98 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 NEXN-AS1Q8NBZ9 246 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 TMEM141Q96I45 108 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 SCGB3A1Q96QR1 104 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 ZMAT4Q9H898 229 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 PAM16Q9Y3D7 125 aa7.88□□□□□ -1.15
VTI1A-204ENST00000480057 NIPBLQ6KC79 2804 aaeCLIP7.88□□□□□ -1.15
VTI1A-204ENST00000480057 TRBV6-4A0A1B0GX49 114 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 LYRM9A8MSI8 78 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 HSBP1L1C9JCN9 74 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 K7EQD1 137 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 TSHBP01222 138 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 PRSS1P07477 247 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 NPSP0C0P6 89 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 IGHV4-30-4P0DP06 118 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 DDTP30046 118 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 Q6ZN92 141 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 Q6ZSN1 163 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 ZNF479Q96JC4 524 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 PRO1933Q9H354 126 aa7.87□□□□□ -1.15
VTI1A-204ENST00000480057 TRGV2A0A075B6R0 118 aa7.86□□□□□ -1.15
VTI1A-204ENST00000480057 H0Y8G0 127 aa7.86□□□□□ -1.15
VTI1A-204ENST00000480057 MIFP14174 115 aa7.86□□□□□ -1.15
VTI1A-204ENST00000480057 ODF1Q14990 250 aa7.86□□□□□ -1.15
VTI1A-204ENST00000480057 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
VTI1A-204ENST00000480057 NEGR1Q7Z3B1 354 aa7.86□□□□□ -1.15
VTI1A-204ENST00000480057 C20orf203Q8NBC4 194 aa7.86□□□□□ -1.15
VTI1A-204ENST00000480057 RNF183Q96D59 192 aa7.86□□□□□ -1.15
VTI1A-204ENST00000480057 TRBV7-3A0A075B6L6 115 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 A0A087WX48 190 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 GAGE12BA1L429 117 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 GAGE7O76087 117 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 GAGE12FP0CL80 117 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 GAGE12GP0CL81 117 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 GAGE12IP0CL82 117 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 RPL36AP83881 106 aaKnown RBP7.85□□□□□ -1.15
VTI1A-204ENST00000480057 DAZ4Q86SG3 579 aaKnown RBP7.85□□□□□ -1.15
VTI1A-204ENST00000480057 ATOH7Q8N100 152 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 RPL36ALQ969Q0 106 aaKnown RBP7.85□□□□□ -1.15
VTI1A-204ENST00000480057 MIEN1Q9BRT3 115 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 DAZ3Q9NR90 486 aaKnown RBP7.85□□□□□ -1.15
VTI1A-204ENST00000480057 TP53TG1Q9Y2A0 90 aa7.85□□□□□ -1.15
VTI1A-204ENST00000480057 DPM2O94777 84 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 P0DMU3 169 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 FAM231AP0DMU4 169 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 FAM231CP0DMU5 169 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 CRYBA4P53673 196 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 KRTAP10-11P60412 298 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 DEFB135Q30KP9 77 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 OR11H2Q8NH07 326 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 UQCR10Q9UDW1 63 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 PYGO1Q9Y3Y4 419 aa7.84□□□□□ -1.15
VTI1A-204ENST00000480057 TEX48A0A1B0GUV7 120 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 LINC00587B1AMM8 73 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 F8VRH5 84 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 IGKCP01834 107 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 IGLC3P0DOY3 106 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 PLNP26678 52 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 COTL1Q14019 142 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 FHL2Q14192 279 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 SAMD5Q5TGI4 173 aa7.83□□□□□ -1.16
VTI1A-204ENST00000480057 MRPL52Q86TS9 123 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms