RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 YPEL4Q96NS1 127 aa8.22□□□□□ -1.09
TRAPPC12-219ENST00000479955 TGP01266 2768 aa8.22□□□□□ -1.09
TRAPPC12-219ENST00000479955 NUDT3O95989 172 aa8.21□□□□□ -1.1
TRAPPC12-219ENST00000479955 ZFAND6Q6FIF0 208 aa8.21□□□□□ -1.1
TRAPPC12-219ENST00000479955 ORMDL3Q8N138 153 aa8.21□□□□□ -1.1
TRAPPC12-219ENST00000479955 ZNRF2Q8NHG8 242 aa8.21□□□□□ -1.1
TRAPPC12-219ENST00000479955 LAMTOR2Q9Y2Q5 125 aa8.21□□□□□ -1.1
TRAPPC12-219ENST00000479955 PHOX2AO14813 284 aa8.2□□□□□ -1.1
TRAPPC12-219ENST00000479955 OR10J3Q5JRS4 329 aa8.2□□□□□ -1.1
TRAPPC12-219ENST00000479955 NEGR1Q7Z3B1 354 aa8.2□□□□□ -1.1
TRAPPC12-219ENST00000479955 TRAPPC1Q9Y5R8 145 aa8.2□□□□□ -1.1
TRAPPC12-219ENST00000479955 A0A096LPF7 62 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 TRBV6-5A0A0K0K1A5 114 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 GAGE12JA6NER3 117 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 D6R8Y8 96 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 FABP9Q0Z7S8 132 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 GAGE1Q13065 139 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 GAGE4Q13068 117 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 GAGE5Q13069 117 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 GAGE13Q4V321 117 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 TMEM97Q5BJF2 176 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 CASC10Q5T4H9 136 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 DAZ4Q86SG3 579 aaKnown RBP8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 ATP6V0E2Q8NHE4 81 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 C20orf78Q9BR46 151 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 ST20Q9HBF5 79 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 DAZ3Q9NR90 486 aaKnown RBP8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 APLNQ9ULZ1 77 aa8.19□□□□□ -1.1
TRAPPC12-219ENST00000479955 COLCA2A8K830 154 aa8.18□□□□□ -1.1
TRAPPC12-219ENST00000479955 SCO1O75880 301 aa8.18□□□□□ -1.1
TRAPPC12-219ENST00000479955 P0DMU3 169 aa8.18□□□□□ -1.1
TRAPPC12-219ENST00000479955 FAM231AP0DMU4 169 aa8.18□□□□□ -1.1
TRAPPC12-219ENST00000479955 FAM231CP0DMU5 169 aa8.18□□□□□ -1.1
TRAPPC12-219ENST00000479955 UBE2D3P61077 147 aa8.18□□□□□ -1.1
TRAPPC12-219ENST00000479955 UBE2D2P62837 147 aa8.18□□□□□ -1.1
TRAPPC12-219ENST00000479955 PRELID3AQ96N28 172 aa8.18□□□□□ -1.1
TRAPPC12-219ENST00000479955 LOC100131303A0A0U1RQF7 123 aa8.17□□□□□ -1.1
TRAPPC12-219ENST00000479955 TNFRSF6BO95407 300 aa8.17□□□□□ -1.1
TRAPPC12-219ENST00000479955 RAB5AP20339 215 aa8.17□□□□□ -1.1
TRAPPC12-219ENST00000479955 RPS10P46783 165 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-219ENST00000479955 CCL18P55774 89 aa8.17□□□□□ -1.1
TRAPPC12-219ENST00000479955 TIRAPP58753 221 aa8.17□□□□□ -1.1
TRAPPC12-219ENST00000479955 GTSF1LQ9H1H1 148 aa8.17□□□□□ -1.1
TRAPPC12-219ENST00000479955 SMKR1H3BMG3 65 aa8.16□□□□□ -1.1
TRAPPC12-219ENST00000479955 VCYO14598 125 aa8.16□□□□□ -1.1
TRAPPC12-219ENST00000479955 TCAPO15273 167 aa8.16□□□□□ -1.1
TRAPPC12-219ENST00000479955 NCR2O95944 276 aa8.16□□□□□ -1.1
TRAPPC12-219ENST00000479955 LINC00694P0DN24 101 aa8.16□□□□□ -1.1
TRAPPC12-219ENST00000479955 SUMO2P61956 95 aaKnown RBP8.16□□□□□ -1.1
TRAPPC12-219ENST00000479955 NRACQ8N912 160 aa8.16□□□□□ -1.1
TRAPPC12-219ENST00000479955 RPL39LQ96EH5 51 aaKnown RBP8.16□□□□□ -1.1
TRAPPC12-219ENST00000479955 SDHAF1A6NFY7 115 aa8.15□□□□□ -1.1
TRAPPC12-219ENST00000479955 PRSS47A8MTI9 375 aa8.15□□□□□ -1.1
TRAPPC12-219ENST00000479955 I3L3M4 83 aa8.15□□□□□ -1.1
TRAPPC12-219ENST00000479955 PMCHP20382 165 aa8.15□□□□□ -1.1
TRAPPC12-219ENST00000479955 RPL32P62910 135 aaKnown RBP8.15□□□□□ -1.1
TRAPPC12-219ENST00000479955 LYPD5Q6UWN5 251 aa8.15□□□□□ -1.1
TRAPPC12-219ENST00000479955 MAP1LC3AQ9H492 121 aa8.15□□□□□ -1.1
TRAPPC12-219ENST00000479955 Q9UF83 564 aa8.15□□□□□ -1.1
TRAPPC12-219ENST00000479955 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
TRAPPC12-219ENST00000479955 GAS8-AS1O95177 125 aa8.14□□□□□ -1.11
TRAPPC12-219ENST00000479955 NPYP01303 97 aa8.14□□□□□ -1.11
TRAPPC12-219ENST00000479955 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
TRAPPC12-219ENST00000479955 KIAA1644Q3SXP7 199 aa8.14□□□□□ -1.11
TRAPPC12-219ENST00000479955 KIR2DL4Q99706 377 aa8.14□□□□□ -1.11
TRAPPC12-219ENST00000479955 ALKBH7Q9BT30 221 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC12-219ENST00000479955 TMEM70Q9BUB7 260 aa8.14□□□□□ -1.11
TRAPPC12-219ENST00000479955 TRAV8-6A0A0B4J262 113 aa8.13□□□□□ -1.11
TRAPPC12-219ENST00000479955 COTL1Q14019 142 aa8.13□□□□□ -1.11
TRAPPC12-219ENST00000479955 ESRGQ1W209 222 aa8.13□□□□□ -1.11
TRAPPC12-219ENST00000479955 UBE2DNLQ8IWF7 75 aa8.13□□□□□ -1.11
TRAPPC12-219ENST00000479955 K7EMI3 77 aa8.12□□□□□ -1.11
TRAPPC12-219ENST00000479955 TRGC2P03986 189 aa8.12□□□□□ -1.11
TRAPPC12-219ENST00000479955 LELP1Q5T871 98 aa8.12□□□□□ -1.11
TRAPPC12-219ENST00000479955 SMIM2Q9BVW6 85 aa8.12□□□□□ -1.11
TRAPPC12-219ENST00000479955 NXT2Q9NPJ8 142 aaKnown RBP8.12□□□□□ -1.11
TRAPPC12-219ENST00000479955 TRBV25-1A0A075B6N4 114 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 TRBV6-8A0A0A6YYG3 113 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 IGHV1-24A0A0C4DH33 117 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 IGHV3-38A0A0C4DH36 116 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 G0S2P27469 103 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 FCER1GP30273 86 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 PKIAP61925 76 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 LGALS9CQ6DKI2 356 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 Q8N8P6 123 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 PRSS3P2Q8NHM4 247 aa8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 MRPS16Q9Y3D3 137 aaKnown RBP8.11□□□□□ -1.11
TRAPPC12-219ENST00000479955 LOC389332A0A1B0GUA5 103 aa8.1□□□□□ -1.11
TRAPPC12-219ENST00000479955 RAB5BP61020 215 aa8.1□□□□□ -1.11
TRAPPC12-219ENST00000479955 IQCJQ1A5X6 159 aa8.1□□□□□ -1.11
TRAPPC12-219ENST00000479955 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
TRAPPC12-219ENST00000479955 LINC00588Q9Y4M8 146 aa8.1□□□□□ -1.11
TRAPPC12-219ENST00000479955 AMTP48728 403 aa8.09□□□□□ -1.11
TRAPPC12-219ENST00000479955 SMAGPQ0VAQ4 97 aa8.09□□□□□ -1.11
TRAPPC12-219ENST00000479955 TMEM18Q96B42 140 aa8.09□□□□□ -1.11
TRAPPC12-219ENST00000479955 DNAH7Q8WXX0 4024 aa8.09□□□□□ -1.11
TRAPPC12-219ENST00000479955 H7C423 109 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 323.8 ms