RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 METTL15P1P0C7V9 234 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 PET100P0DJ07 73 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 BAXQ07812 192 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 SLC38A11Q08AI6 406 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 OR2F1Q13607 317 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 PSMG4Q5JS54 123 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 STX12Q86Y82 276 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 ASB13Q8WXK3 278 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 PPP1R14BQ96C90 147 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 PFDN5Q99471 154 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 SLC50A1Q9BRV3 221 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 SLC25A31Q9H0C2 315 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 KCNIP2Q9NS61 270 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 RPRMQ9NS64 109 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 UQCC1Q9NVA1 299 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 CBY1Q9Y3M2 126 aa3.06□□□□□ -1.92
UPF3A-205ENST00000479712 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
UPF3A-205ENST00000479712 IGHV6-1A0A0B4J1U7 121 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 A0A0J9YX75 114 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 TMEM189A5PLL7 270 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 IFNA5P01569 189 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 ORM2P19652 201 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 PSMB2P49721 201 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 KRTAP10-4P60372 401 aaPredicted RBP3.05□□□□□ -1.92
UPF3A-205ENST00000479712 B2MP61769 119 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 GUK1Q16774 197 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 ACTL10Q5JWF8 245 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 EBLN2Q6P2I7 272 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 LCN15Q6UWW0 184 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 PATE2Q6UY27 113 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 ZNF705AQ6ZN79 300 aaPredicted RBP3.05□□□□□ -1.92
UPF3A-205ENST00000479712 BPIFA4PQ86YQ2 179 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 Q8NAQ8 132 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 OR11H2Q8NH07 326 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 LINC00477Q96M19 166 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 MGST2Q99735 147 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 PARD6GQ9BYG4 376 aaPredicted RBP3.05□□□□□ -1.92
UPF3A-205ENST00000479712 DOK5Q9P104 306 aa3.05□□□□□ -1.92
UPF3A-205ENST00000479712 LSM5Q9Y4Y9 91 aaKnown RBP3.05□□□□□ -1.92
UPF3A-205ENST00000479712 TRAV8-2A0A0B4J237 113 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 IGSF23A1L1A6 192 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 FAM24AA6NFZ4 105 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 KNCNA6PVL3 124 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 COLCA2A8K830 154 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 ZNF705FA8MVS1 300 aaPredicted RBP3.04□□□□□ -1.92
UPF3A-205ENST00000479712 COX7A2P2O60397 106 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 OR5G3P0C626 314 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 ZNF705DP0CH99 300 aaPredicted RBP3.04□□□□□ -1.92
UPF3A-205ENST00000479712 ZNF705BP0CI00 300 aaPredicted RBP3.04□□□□□ -1.92
UPF3A-205ENST00000479712 CXCL3P19876 107 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 S100A10P60903 97 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 RRAS2P62070 204 aaPredicted RBP3.04□□□□□ -1.92
UPF3A-205ENST00000479712 PSG9Q00887 426 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 MOBPQ13875 183 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 PDE6HQ13956 83 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 C10orf113Q5VZT2 155 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 AMTNQ6UX39 209 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 LINC00305Q7Z4B0 112 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 ZNF709Q8N972 641 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 IGF2BP2-AS1Q96M15 143 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 ARL6Q9H0F7 186 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 SLC39A9Q9NUM3 307 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 TMEM14CQ9P0S9 112 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 PXMP4Q9Y6I8 212 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 DNAH8Q96JB1 4490 aa3.04□□□□□ -1.92
UPF3A-205ENST00000479712 NBDYA0A0U1RRE5 68 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 C17orf112F2Z3M2 114 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 SSNA1O43805 119 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 NDUFS5O43920 106 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 SCO1O75880 301 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 CST7O76096 145 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 MPC2O95563 127 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 IGLC2P0DOY2 106 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 TSPOP30536 169 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 H2BFSP57053 126 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 PSG3Q16557 428 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 TTC32Q5I0X7 151 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 FAM78BQ5VT40 261 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 SLC25A29Q8N8R3 303 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 OR8A1Q8NGG7 326 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 OR5C1Q8NGR4 320 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 PPP1R1CQ8WVI7 109 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 LINC00052Q96N35 136 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 ODF3Q96PU9 254 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 NPCDR1Q9BY65 106 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 MRPL32Q9BYC8 188 aaKnown RBP3.03□□□□□ -1.92
UPF3A-205ENST00000479712 PRELID1Q9Y255 219 aa3.03□□□□□ -1.92
UPF3A-205ENST00000479712 USH2AO75445 5202 aa3.03□□□□□ -1.93
UPF3A-205ENST00000479712 TRAV10A0A0B4J240 114 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 UBE2L5PA0A1B0GUS4 154 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 SIX6O95475 246 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 NMBP08949 121 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 SPART-AS1P0CW21 52 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 HIST1H1EP10412 219 aaKnown RBP3.02□□□□□ -1.93
UPF3A-205ENST00000479712 FGF7P21781 194 aa3.02□□□□□ -1.93
UPF3A-205ENST00000479712 RPL12P30050 165 aaKnown RBP3.02□□□□□ -1.93
UPF3A-205ENST00000479712 GDF5OSQ5U4N7 250 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms