RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.01□□□□□ -1.45
GPNMB-211ENST00000479625 TRAV34A0A0B4J273 112 aa6.01□□□□□ -1.45
GPNMB-211ENST00000479625 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
GPNMB-211ENST00000479625 K7EQM0 130 aa6.01□□□□□ -1.45
GPNMB-211ENST00000479625 PLA2G10O15496 165 aa6.01□□□□□ -1.45
GPNMB-211ENST00000479625 STPG4Q8N801 248 aa6.01□□□□□ -1.45
GPNMB-211ENST00000479625 OR10G8Q8NGN5 311 aa6.01□□□□□ -1.45
GPNMB-211ENST00000479625 PRSS3P2Q8NHM4 247 aa6.01□□□□□ -1.45
GPNMB-211ENST00000479625 TMSB15BA0A087X1C1 80 aa6□□□□□ -1.45
GPNMB-211ENST00000479625 A0A1W2PPV4 95 aa6□□□□□ -1.45
GPNMB-211ENST00000479625 KRBOX1C9JBD0 128 aa6□□□□□ -1.45
GPNMB-211ENST00000479625 RAB5CP51148 216 aa6□□□□□ -1.45
GPNMB-211ENST00000479625 REG3AQ06141 175 aa6□□□□□ -1.45
GPNMB-211ENST00000479625 CNPY1Q3B7I2 92 aa6□□□□□ -1.45
GPNMB-211ENST00000479625 ARL2-SNX15V9GYD0 113 aa6□□□□□ -1.45
GPNMB-211ENST00000479625 A0A096LNI7 61 aa5.99□□□□□ -1.45
GPNMB-211ENST00000479625 LYRM1O43325 122 aa5.99□□□□□ -1.45
GPNMB-211ENST00000479625 CRIP1P50238 77 aa5.99□□□□□ -1.45
GPNMB-211ENST00000479625 SRSF9Q13242 221 aaKnown RBP eCLIP5.99□□□□□ -1.45
GPNMB-211ENST00000479625 ZNF56Q15929 161 aa5.99□□□□□ -1.45
GPNMB-211ENST00000479625 DNLZQ5SXM8 178 aa5.99□□□□□ -1.45
GPNMB-211ENST00000479625 C15orf56Q8N910 161 aa5.99□□□□□ -1.45
GPNMB-211ENST00000479625 EPDR1Q9UM22 224 aa5.99□□□□□ -1.45
GPNMB-211ENST00000479625 PHLDA3Q9Y5J5 127 aa5.99□□□□□ -1.45
GPNMB-211ENST00000479625 CCDC160A6NGH7 325 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 FABP5P3A8MUU1 101 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 H7C1H1 209 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 SH2D1AO60880 128 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 NDUFS6O75380 124 aaKnown RBP5.98□□□□□ -1.45
GPNMB-211ENST00000479625 TPT1P13693 172 aaKnown RBP5.98□□□□□ -1.45
GPNMB-211ENST00000479625 PKIAP61925 76 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 SAPCD1Q5SSQ6 148 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 Q86TA4 180 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 C20orf203Q8NBC4 194 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 SCGB1C1Q8TD33 95 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 GFRA4Q9GZZ7 299 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 HSPB11Q9Y547 144 aa5.98□□□□□ -1.45
GPNMB-211ENST00000479625 A0A0U1RQV1 116 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 STAG3L2P0CL84 134 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 STAG3L3P0CL85 134 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 GCHFRP30047 84 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 CDC34P49427 236 aaPredicted RBP5.97□□□□□ -1.45
GPNMB-211ENST00000479625 HIGD2BQ4VC39 106 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 PRR27Q6MZM9 219 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 ZFP82Q8N141 532 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 DERL1Q9BUN8 251 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 WFDC1Q9HC57 220 aa5.97□□□□□ -1.45
GPNMB-211ENST00000479625 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.46
GPNMB-211ENST00000479625 TRBV25-1A0A075B6N4 114 aa5.96□□□□□ -1.46
GPNMB-211ENST00000479625 TRBV6-1A0A0K0K1D8 114 aa5.96□□□□□ -1.46
GPNMB-211ENST00000479625 DEFA3P59666 94 aa5.96□□□□□ -1.46
GPNMB-211ENST00000479625 RAB4BP61018 213 aa5.96□□□□□ -1.46
GPNMB-211ENST00000479625 INO80EQ8NBZ0 244 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-211ENST00000479625 SUN5Q8TC36 379 aa5.96□□□□□ -1.46
GPNMB-211ENST00000479625 RBM38Q9H0Z9 239 aaKnown RBP5.96□□□□□ -1.46
GPNMB-211ENST00000479625 VAX2Q9UIW0 290 aa5.96□□□□□ -1.46
GPNMB-211ENST00000479625 RPS10P46783 165 aaKnown RBP5.95□□□□□ -1.46
GPNMB-211ENST00000479625 Q6ZRP5 223 aa5.95□□□□□ -1.46
GPNMB-211ENST00000479625 OR10AG1Q8NH19 301 aa5.95□□□□□ -1.46
GPNMB-211ENST00000479625 RAB24Q969Q5 203 aa5.95□□□□□ -1.46
GPNMB-211ENST00000479625 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
GPNMB-211ENST00000479625 TRAV8-4A0A0B4J246 113 aa5.94□□□□□ -1.46
GPNMB-211ENST00000479625 FAM231BA6NCW3 169 aa5.94□□□□□ -1.46
GPNMB-211ENST00000479625 P01737 135 aa5.94□□□□□ -1.46
GPNMB-211ENST00000479625 IQCJQ1A5X6 159 aa5.94□□□□□ -1.46
GPNMB-211ENST00000479625 PPP1R1CQ8WVI7 109 aa5.94□□□□□ -1.46
GPNMB-211ENST00000479625 IGHV1-24A0A0C4DH33 117 aa5.93□□□□□ -1.46
GPNMB-211ENST00000479625 MUC21A0A140T8X8 626 aa5.93□□□□□ -1.46
GPNMB-211ENST00000479625 GAGE12HA6NDE8 117 aa5.93□□□□□ -1.46
GPNMB-211ENST00000479625 PEX7O00628 323 aa5.93□□□□□ -1.46
GPNMB-211ENST00000479625 IFNA7P01567 189 aa5.93□□□□□ -1.46
GPNMB-211ENST00000479625 RPL12P30050 165 aaKnown RBP5.93□□□□□ -1.46
GPNMB-211ENST00000479625 H2BFSP57053 126 aa5.93□□□□□ -1.46
GPNMB-211ENST00000479625 TMEM97Q5BJF2 176 aa5.93□□□□□ -1.46
GPNMB-211ENST00000479625 PRR26Q8N8Z3 221 aa5.93□□□□□ -1.46
GPNMB-211ENST00000479625 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.93□□□□□ -1.46
GPNMB-211ENST00000479625 IGKV3OR2-268A0A0C4DH90 116 aa5.92□□□□□ -1.46
GPNMB-211ENST00000479625 F5H697 171 aa5.92□□□□□ -1.46
GPNMB-211ENST00000479625 UBE2G2P60604 165 aa5.92□□□□□ -1.46
GPNMB-211ENST00000479625 FAM162BQ5T6X4 162 aa5.92□□□□□ -1.46
GPNMB-211ENST00000479625 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
GPNMB-211ENST00000479625 TMEM167BQ9NRX6 74 aa5.92□□□□□ -1.46
GPNMB-211ENST00000479625 TRAV26-2A0A0B4J265 109 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 MPC2O95563 127 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 GZMBP10144 247 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 SULT1A2P50226 295 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 SSTP61278 116 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 CACNG7P62955 275 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 PRR4Q16378 134 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 ZNF674Q2M3X9 581 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 LINC00526Q96FQ7 95 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 AQP10Q96PS8 301 aa5.91□□□□□ -1.46
GPNMB-211ENST00000479625 GVQW2A0A096LPI5 108 aaPredicted RBP5.9□□□□□ -1.46
GPNMB-211ENST00000479625 FAM240BA0A1B0GVZ2 78 aa5.9□□□□□ -1.46
GPNMB-211ENST00000479625 A0A1W2PRE2 83 aa5.9□□□□□ -1.46
GPNMB-211ENST00000479625 CXorf1O96002 111 aa5.9□□□□□ -1.46
GPNMB-211ENST00000479625 COX8CQ7Z4L0 72 aa5.9□□□□□ -1.46
GPNMB-211ENST00000479625 ZNF664Q8N3J9 261 aa5.9□□□□□ -1.46
GPNMB-211ENST00000479625 TMEM243Q9BU79 118 aa5.9□□□□□ -1.46
GPNMB-211ENST00000479625 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms