RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 DEFB104AQ8WTQ1 72 aa18.1■□□□□ 0.49
SYNGAP1-206ENST00000479510 SPAG8Q99932 426 aaPredicted RBP18.1■□□□□ 0.49
SYNGAP1-206ENST00000479510 VCX2Q9H322 139 aa18.1■□□□□ 0.49
SYNGAP1-206ENST00000479510 ACACBO00763 2458 aa18.09■□□□□ 0.49
SYNGAP1-206ENST00000479510 IGLV4-3A0A075B6K6 122 aa18.08■□□□□ 0.49
SYNGAP1-206ENST00000479510 Q8N2B8 174 aa18.08■□□□□ 0.49
SYNGAP1-206ENST00000479510 A8MWV9 139 aa18.08■□□□□ 0.48
SYNGAP1-206ENST00000479510 RHODO00212 210 aa18.08■□□□□ 0.48
SYNGAP1-206ENST00000479510 CFAP126Q5VTH2 177 aa18.08■□□□□ 0.48
SYNGAP1-206ENST00000479510 DUX5Q96PT3 197 aa18.08■□□□□ 0.48
SYNGAP1-206ENST00000479510 TRBV20-1A0A075B6N2 111 aa18.07■□□□□ 0.48
SYNGAP1-206ENST00000479510 ZNF22P17026 224 aaPredicted RBP18.07■□□□□ 0.48
SYNGAP1-206ENST00000479510 SH2D6Q7Z4S9 175 aa18.07■□□□□ 0.48
SYNGAP1-206ENST00000479510 APOMO95445 188 aa18.07■□□□□ 0.48
SYNGAP1-206ENST00000479510 H3BMM0 161 aa18.06■□□□□ 0.48
SYNGAP1-206ENST00000479510 RBMY1A1P0DJD3 496 aaKnown RBP18.06■□□□□ 0.48
SYNGAP1-206ENST00000479510 RBMY1CP0DJD4 496 aa18.06■□□□□ 0.48
SYNGAP1-206ENST00000479510 SCGB1A1P11684 91 aa18.06■□□□□ 0.48
SYNGAP1-206ENST00000479510 RBMY1FQ15415 496 aaKnown RBP18.06■□□□□ 0.48
SYNGAP1-206ENST00000479510 C10orf126Q8N4M7 172 aa18.06■□□□□ 0.48
SYNGAP1-206ENST00000479510 OPRPNQ99935 248 aaPredicted RBP18.06■□□□□ 0.48
SYNGAP1-206ENST00000479510 SPG11Q96JI7 2443 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 CFC1BP0CG36 223 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 CFC1P0CG37 223 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 SPATA25Q9BR10 227 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 LINC00467Q9BRT7 94 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 PEMTQ9UBM1 199 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 CSPG4Q6UVK1 2322 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 ZFHX3Q15911 3703 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 M0R2P5 195 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 IGHV4-31P0DP07 118 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 SIGMAR1Q99720 223 aa18.05■□□□□ 0.48
SYNGAP1-206ENST00000479510 LOC107984156A0A0G2JMH3 177 aa18.04■□□□□ 0.48
SYNGAP1-206ENST00000479510 GAGE12HA6NDE8 117 aa18.04■□□□□ 0.48
SYNGAP1-206ENST00000479510 KNCNA6PVL3 124 aa18.04■□□□□ 0.48
SYNGAP1-206ENST00000479510 DEFB131AP59861 70 aa18.04■□□□□ 0.48
SYNGAP1-206ENST00000479510 ARL17AQ8IVW1 177 aa18.04■□□□□ 0.48
SYNGAP1-206ENST00000479510 PRO1854Q9UHT4 67 aa18.04■□□□□ 0.48
SYNGAP1-206ENST00000479510 ZNF415Q09FC8 603 aa18.03■□□□□ 0.48
SYNGAP1-206ENST00000479510 C1QTNF4Q9BXJ3 329 aa18.03■□□□□ 0.48
SYNGAP1-206ENST00000479510 TSSC4Q9Y5U2 329 aaPredicted RBP18.03■□□□□ 0.48
SYNGAP1-206ENST00000479510 CELSR1Q9NYQ6 3014 aa18.02■□□□□ 0.47
SYNGAP1-206ENST00000479510 PSMB2P49721 201 aa18.02■□□□□ 0.47
SYNGAP1-206ENST00000479510 TNFRSF18Q9Y5U5 241 aa18.02■□□□□ 0.47
SYNGAP1-206ENST00000479510 A0A0J9YXV3 536 aa18.01■□□□□ 0.47
SYNGAP1-206ENST00000479510 TMEM238C9JI98 176 aa18.01■□□□□ 0.47
SYNGAP1-206ENST00000479510 SLURP1P55000 103 aa18.01■□□□□ 0.47
SYNGAP1-206ENST00000479510 MRPS36P82909 103 aaKnown RBP18.01■□□□□ 0.47
SYNGAP1-206ENST00000479510 DUX3Q96PT4 197 aa18.01■□□□□ 0.47
SYNGAP1-206ENST00000479510 BEX4Q9NWD9 120 aaPredicted RBP18■□□□□ 0.47
SYNGAP1-206ENST00000479510 MAPK1IP1LQ8NDC0 245 aa18■□□□□ 0.47
SYNGAP1-206ENST00000479510 C4orf3Q8WVX3 66 aa18■□□□□ 0.47
SYNGAP1-206ENST00000479510 A0A0B4J2C4 111 aa17.99■□□□□ 0.47
SYNGAP1-206ENST00000479510 CD28P10747 220 aa17.99■□□□□ 0.47
SYNGAP1-206ENST00000479510 SPANXA1Q9NS26 97 aa17.99■□□□□ 0.47
SYNGAP1-206ENST00000479510 RBMY1BA6NDE4 496 aaKnown RBP17.99■□□□□ 0.47
SYNGAP1-206ENST00000479510 RBMY1EA6NEQ0 496 aaKnown RBP17.99■□□□□ 0.47
SYNGAP1-206ENST00000479510 RBMY1DP0C7P1 496 aaKnown RBP17.99■□□□□ 0.47
SYNGAP1-206ENST00000479510 SMCPP49901 116 aaPredicted RBP17.99■□□□□ 0.47
SYNGAP1-206ENST00000479510 DNAJC30Q96LL9 226 aa17.99■□□□□ 0.47
SYNGAP1-206ENST00000479510 MTURNQ8N3F0 131 aa17.98■□□□□ 0.47
SYNGAP1-206ENST00000479510 SPXQ9BT56 116 aa17.98■□□□□ 0.47
SYNGAP1-206ENST00000479510 FOXI1Q12951 378 aa17.97■□□□□ 0.47
SYNGAP1-206ENST00000479510 SBSPONQ8IVN8 264 aa17.97■□□□□ 0.47
SYNGAP1-206ENST00000479510 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.97■□□□□ 0.47
SYNGAP1-206ENST00000479510 FAM104AQ969W3 186 aa17.97■□□□□ 0.47
SYNGAP1-206ENST00000479510 CFAP46Q8IYW2 2715 aa17.97■□□□□ 0.47
SYNGAP1-206ENST00000479510 DOPEY2Q9Y3R5 2298 aa17.97■□□□□ 0.47
SYNGAP1-206ENST00000479510 TMEM61Q8N0U2 210 aa17.96■□□□□ 0.47
SYNGAP1-206ENST00000479510 CLUHP3Q96NS8 147 aa17.96■□□□□ 0.47
SYNGAP1-206ENST00000479510 A4D1N5 150 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 AZU1P20160 251 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 LRRC75A-AS1Q8N1F1 130 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 RAX2Q96IS3 184 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 VPS13CQ709C8 3753 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 TCL1BO95988 128 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 HTN1P15515 57 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 DEFB136Q30KP8 78 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 TIMM21Q9BVV7 248 aa17.95■□□□□ 0.46
SYNGAP1-206ENST00000479510 USP9XQ93008 2570 aaPredicted RBP17.94■□□□□ 0.46
SYNGAP1-206ENST00000479510 BEAN1Q3B7T3 259 aa17.94■□□□□ 0.46
SYNGAP1-206ENST00000479510 C18orf65Q6ZTR6 163 aa17.94■□□□□ 0.46
SYNGAP1-206ENST00000479510 TMEM263Q8WUH6 116 aaKnown RBP17.94■□□□□ 0.46
SYNGAP1-206ENST00000479510 MAP6D1Q9H9H5 199 aa17.94■□□□□ 0.46
SYNGAP1-206ENST00000479510 TINCRA0A1B0GVN0 87 aa17.94■□□□□ 0.46
SYNGAP1-206ENST00000479510 IGHV3-30-3P0DP02 117 aa17.94■□□□□ 0.46
SYNGAP1-206ENST00000479510 IGHV3-73A0A0B4J1V6 119 aa17.93■□□□□ 0.46
SYNGAP1-206ENST00000479510 A0A0J9YXY3 114 aa17.93■□□□□ 0.46
SYNGAP1-206ENST00000479510 M0QXV9 152 aa17.93■□□□□ 0.46
SYNGAP1-206ENST00000479510 COL12A1Q99715 3063 aa17.93■□□□□ 0.46
SYNGAP1-206ENST00000479510 IGHV3-53P01767 116 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 IGHV3-33P01772 117 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 PROK1P58294 105 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 C11orf72Q8NBR9 251 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 GTSF1LQ9H1H1 148 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 IGHV1-58A0A0C4DH39 117 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 TEN1Q86WV5 123 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 DYNLRB2Q8TF09 96 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 CHCHD7Q9BUK0 85 aa17.92■□□□□ 0.46
SYNGAP1-206ENST00000479510 IGSF10Q6WRI0 2623 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms