RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 MRAP2Q96G30 205 aa12.94□□□□□ -0.34
RUNX3-204ENST00000479341 GNB1LQ9BYB4 327 aa12.94□□□□□ -0.34
RUNX3-204ENST00000479341 ICOSQ9Y6W8 199 aa12.94□□□□□ -0.34
RUNX3-204ENST00000479341 GAS8-AS1O95177 125 aa12.93□□□□□ -0.34
RUNX3-204ENST00000479341 NUDT3O95989 172 aa12.93□□□□□ -0.34
RUNX3-204ENST00000479341 NEXN-AS1Q8NBZ9 246 aa12.93□□□□□ -0.34
RUNX3-204ENST00000479341 GAGE12JA6NER3 117 aa12.92□□□□□ -0.34
RUNX3-204ENST00000479341 GAGE1Q13065 139 aa12.92□□□□□ -0.34
RUNX3-204ENST00000479341 GAGE4Q13068 117 aa12.92□□□□□ -0.34
RUNX3-204ENST00000479341 GAGE5Q13069 117 aa12.92□□□□□ -0.34
RUNX3-204ENST00000479341 GAGE13Q4V321 117 aa12.92□□□□□ -0.34
RUNX3-204ENST00000479341 DNAJC30Q96LL9 226 aa12.92□□□□□ -0.34
RUNX3-204ENST00000479341 NIT2Q9NQR4 276 aa12.92□□□□□ -0.34
RUNX3-204ENST00000479341 TRBV7-3A0A075B6L6 115 aa12.91□□□□□ -0.34
RUNX3-204ENST00000479341 HLA-DQA1P01909 254 aa12.91□□□□□ -0.34
RUNX3-204ENST00000479341 RPL36AP83881 106 aaKnown RBP12.91□□□□□ -0.34
RUNX3-204ENST00000479341 ZNRF2Q8NHG8 242 aa12.91□□□□□ -0.34
RUNX3-204ENST00000479341 RPL36ALQ969Q0 106 aaKnown RBP12.91□□□□□ -0.34
RUNX3-204ENST00000479341 SMKR1H3BMG3 65 aa12.9□□□□□ -0.34
RUNX3-204ENST00000479341 SRIP30626 198 aa12.9□□□□□ -0.34
RUNX3-204ENST00000479341 RPL39LQ96EH5 51 aaKnown RBP12.9□□□□□ -0.34
RUNX3-204ENST00000479341 NCR2O95944 276 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 PPBPP02775 128 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 MT-ND6P03923 174 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 CKS2P33552 79 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 RPS10P46783 165 aaKnown RBP12.89□□□□□ -0.35
RUNX3-204ENST00000479341 UBE2D3P61077 147 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 UBE2D2P62837 147 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 SH2D6Q7Z4S9 175 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 NRACQ8N912 160 aa12.89□□□□□ -0.35
RUNX3-204ENST00000479341 TRBV6-5A0A0K0K1A5 114 aa12.88□□□□□ -0.35
RUNX3-204ENST00000479341 COLCA2A8K830 154 aa12.88□□□□□ -0.35
RUNX3-204ENST00000479341 APCSP02743 223 aa12.88□□□□□ -0.35
RUNX3-204ENST00000479341 ATP6V0E2Q8NHE4 81 aa12.88□□□□□ -0.35
RUNX3-204ENST00000479341 TNFRSF18Q9Y5U5 241 aa12.88□□□□□ -0.35
RUNX3-204ENST00000479341 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
RUNX3-204ENST00000479341 RYR2Q92736 4967 aa12.87□□□□□ -0.35
RUNX3-204ENST00000479341 D6R8Y8 96 aa12.87□□□□□ -0.35
RUNX3-204ENST00000479341 PPP1R17O96001 155 aa12.87□□□□□ -0.35
RUNX3-204ENST00000479341 OR10J3Q5JRS4 329 aa12.87□□□□□ -0.35
RUNX3-204ENST00000479341 ORMDL3Q8N138 153 aa12.87□□□□□ -0.35
RUNX3-204ENST00000479341 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
RUNX3-204ENST00000479341 ESRGQ1W209 222 aa12.86□□□□□ -0.35
RUNX3-204ENST00000479341 SACSQ9NZJ4 4579 aa12.85□□□□□ -0.35
RUNX3-204ENST00000479341 KIAA1644Q3SXP7 199 aa12.85□□□□□ -0.35
RUNX3-204ENST00000479341 LYPD5Q6UWN5 251 aa12.85□□□□□ -0.35
RUNX3-204ENST00000479341 TRAPPC1Q9Y5R8 145 aa12.85□□□□□ -0.35
RUNX3-204ENST00000479341 STARD9Q9P2P6 4700 aa12.85□□□□□ -0.35
RUNX3-204ENST00000479341 CSMD3Q7Z407 3707 aa12.85□□□□□ -0.35
RUNX3-204ENST00000479341 PHOX2AO14813 284 aa12.84□□□□□ -0.35
RUNX3-204ENST00000479341 TNFRSF6BO95407 300 aa12.84□□□□□ -0.35
RUNX3-204ENST00000479341 NPYP01303 97 aa12.84□□□□□ -0.35
RUNX3-204ENST00000479341 TIRAPP58753 221 aa12.84□□□□□ -0.35
RUNX3-204ENST00000479341 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
RUNX3-204ENST00000479341 PRELID3AQ96N28 172 aa12.84□□□□□ -0.35
RUNX3-204ENST00000479341 GTSF1LQ9H1H1 148 aa12.84□□□□□ -0.35
RUNX3-204ENST00000479341 ST20Q9HBF5 79 aa12.84□□□□□ -0.35
RUNX3-204ENST00000479341 POLR2KP53803 58 aaKnown RBP12.83□□□□□ -0.36
RUNX3-204ENST00000479341 DAZ4Q86SG3 579 aaKnown RBP12.83□□□□□ -0.36
RUNX3-204ENST00000479341 C20orf78Q9BR46 151 aa12.83□□□□□ -0.36
RUNX3-204ENST00000479341 DAZ3Q9NR90 486 aaKnown RBP12.83□□□□□ -0.36
RUNX3-204ENST00000479341 LAMTOR2Q9Y2Q5 125 aa12.83□□□□□ -0.36
RUNX3-204ENST00000479341 IGHV3-38A0A0C4DH36 116 aa12.82□□□□□ -0.36
RUNX3-204ENST00000479341 SDHAF1A6NFY7 115 aa12.82□□□□□ -0.36
RUNX3-204ENST00000479341 RAB5AP20339 215 aa12.82□□□□□ -0.36
RUNX3-204ENST00000479341 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
RUNX3-204ENST00000479341 TMEM70Q9BUB7 260 aa12.82□□□□□ -0.36
RUNX3-204ENST00000479341 CCL18P55774 89 aa12.81□□□□□ -0.36
RUNX3-204ENST00000479341 LYSTQ99698 3801 aa12.81□□□□□ -0.36
RUNX3-204ENST00000479341 ALKBH7Q9BT30 221 aaPredicted RBP12.81□□□□□ -0.36
RUNX3-204ENST00000479341 LINC00588Q9Y4M8 146 aa12.81□□□□□ -0.36
RUNX3-204ENST00000479341 PRSS47A8MTI9 375 aa12.8□□□□□ -0.36
RUNX3-204ENST00000479341 RPL32P62910 135 aaKnown RBP12.8□□□□□ -0.36
RUNX3-204ENST00000479341 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
RUNX3-204ENST00000479341 TRBV27A0A0K0K1C4 114 aa12.79□□□□□ -0.36
RUNX3-204ENST00000479341 NTM-AS1Q6ZSK4 140 aa12.79□□□□□ -0.36
RUNX3-204ENST00000479341 MRPS16Q9Y3D3 137 aaKnown RBP12.79□□□□□ -0.36
RUNX3-204ENST00000479341 I3L3M4 83 aa12.78□□□□□ -0.36
RUNX3-204ENST00000479341 VCYO14598 125 aa12.78□□□□□ -0.36
RUNX3-204ENST00000479341 PMCHP20382 165 aa12.78□□□□□ -0.36
RUNX3-204ENST00000479341 PLECQ15149 4684 aaKnown RBP12.78□□□□□ -0.36
RUNX3-204ENST00000479341 TMEM97Q5BJF2 176 aa12.78□□□□□ -0.36
RUNX3-204ENST00000479341 LELP1Q5T871 98 aa12.78□□□□□ -0.36
RUNX3-204ENST00000479341 LGALS9CQ6DKI2 356 aa12.78□□□□□ -0.36
RUNX3-204ENST00000479341 SMIM2Q9BVW6 85 aa12.77□□□□□ -0.37
RUNX3-204ENST00000479341 MAP1LC3AQ9H492 121 aa12.77□□□□□ -0.37
RUNX3-204ENST00000479341 TRBV6-8A0A0A6YYG3 113 aa12.76□□□□□ -0.37
RUNX3-204ENST00000479341 TRGC2P03986 189 aa12.76□□□□□ -0.37
RUNX3-204ENST00000479341 COTL1Q14019 142 aa12.76□□□□□ -0.37
RUNX3-204ENST00000479341 UPK3BQ9BT76 320 aa12.76□□□□□ -0.37
RUNX3-204ENST00000479341 DNAH1Q9P2D7 4330 aa12.76□□□□□ -0.37
RUNX3-204ENST00000479341 IGLV2-18A0A075B6J9 118 aa12.75□□□□□ -0.37
RUNX3-204ENST00000479341 TSHBP01222 138 aa12.75□□□□□ -0.37
RUNX3-204ENST00000479341 UBE2DNLQ8IWF7 75 aa12.75□□□□□ -0.37
RUNX3-204ENST00000479341 DEFB104AQ8WTQ1 72 aa12.75□□□□□ -0.37
RUNX3-204ENST00000479341 LINC00476Q8WZB0 136 aa12.75□□□□□ -0.37
RUNX3-204ENST00000479341 LOC389332A0A1B0GUA5 103 aa12.74□□□□□ -0.37
RUNX3-204ENST00000479341 IQCJQ1A5X6 159 aa12.74□□□□□ -0.37
RUNX3-204ENST00000479341 TRAV8-6A0A0B4J262 113 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms