RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
VCP-205ENST00000479300 A8MWL6 223 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 GGTLC3B5MD39 225 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 IGKV3-20P01619 116 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 HLA-DRB4P13762 266 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 ORM2P19652 201 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 HLA-DMBP28068 263 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 LINC00336Q6ZUF6 198 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 ZNF575Q86XF7 245 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 GTSF1Q8WW33 167 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 PSG8Q9UQ74 426 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 HLA-DRB4X5D2U9 266 aa4.8□□□□□ -1.64
VCP-205ENST00000479300 IGHV3OR16-12A0A075B7B8 117 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 A0A1B0GW15 77 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 SMIM9A6NGZ8 99 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 PRSS29PA6NIE9 313 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 HIGD1CA8MV81 97 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 E9PLD3 99 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 H3BMM0 161 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 DUSP14O95147 198 aaKnown RBP4.79□□□□□ -1.64
VCP-205ENST00000479300 SPART-AS1P0CW21 52 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 GAGE5Q13069 117 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 GAGE6Q13070 117 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 MIR17HGQ75NE6 70 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 THAP8Q8NA92 274 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 Q8NAQ8 132 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 ZC2HC1AQ96GY0 325 aa4.79□□□□□ -1.64
VCP-205ENST00000479300 RPP21Q9H633 154 aaKnown RBP4.79□□□□□ -1.64
VCP-205ENST00000479300 IGKV1D-37A0A075B6S9 117 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 DEFB131BA0A096LNP1 70 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 PEX7O00628 323 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 RBMY1A1P0DJD3 496 aaKnown RBP4.78□□□□□ -1.64
VCP-205ENST00000479300 RBMY1CP0DJD4 496 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 CAMPP49913 170 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 EMP1P54849 157 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 FXYD7P58549 80 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 RBMY1FQ15415 496 aaKnown RBP4.78□□□□□ -1.64
VCP-205ENST00000479300 TAL2Q16559 108 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 RAB37Q96AX2 223 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 ZNF503Q96F45 646 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 HIGD1AQ9Y241 93 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 X6R8D5 127 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 APOBP04114 4563 aaKnown RBP4.78□□□□□ -1.64
VCP-205ENST00000479300 LRP1BQ9NZR2 4599 aa4.78□□□□□ -1.64
VCP-205ENST00000479300 IGHV4-4A0A075B6R2 117 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 TRBV7-9A0A0J9YWB2 115 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 ZNF561-AS1K7EIQ3 104 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 GIG44P09565 113 aaPredicted RBP4.77□□□□□ -1.65
VCP-205ENST00000479300 SPINK8P0C7L1 97 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 RPL7P18124 248 aaKnown RBP4.77□□□□□ -1.65
VCP-205ENST00000479300 RRN3P1Q2M238 152 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 Q6ZTC4 211 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 UBE2DNLQ8IWF7 75 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 CSNK1G2-AS1Q8NCQ2 148 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 NAA38Q9BRA0 125 aaKnown RBP4.77□□□□□ -1.65
VCP-205ENST00000479300 TM2D2Q9BX73 214 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 PRO0461Q9UI25 63 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 AGRNO00468 2067 aa4.77□□□□□ -1.65
VCP-205ENST00000479300 A0A0J9YX75 114 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 C19orf71A6NCJ1 209 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 H3BMG7 143 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 M0R2N4 97 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 INSP01308 110 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 P0DMU3 169 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 FAM231AP0DMU4 169 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 FAM231CP0DMU5 169 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 FOXA3P55318 350 aaPredicted RBP4.76□□□□□ -1.65
VCP-205ENST00000479300 UBE2L3P68036 154 aaKnown RBP4.76□□□□□ -1.65
VCP-205ENST00000479300 WFDC2Q14508 124 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 GAGE13Q4V321 117 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 KLF12Q9Y4X4 402 aa4.76□□□□□ -1.65
VCP-205ENST00000479300 IGKV1OR2-108A0A075B7D4 117 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 NPIPB6E9PJ23 425 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 F6UB75 175 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 H3BRN7 92 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 COX7A2P2O60397 106 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 NCR2O95944 276 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 P01737 135 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 HTN3P15516 51 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 FXYD2P54710 66 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 DAD1P61803 113 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 FOXI1Q12951 378 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 RIGQ13278 110 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 C12orf74Q32Q52 190 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 Q6ZR54 194 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 Q6ZUT4 128 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 CEND1Q8N111 149 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 OR1L4Q8NGR5 311 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 FMC1Q96HJ9 113 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 FAM167A-AS1Q96KT0 104 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 ANAPC13Q9BS18 74 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 SHANK2-AS3Q9BTD1 123 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 CHAC1Q9BUX1 264 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 MLST8Q9BVC4 326 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 SLC25A39Q9BZJ4 359 aaPredicted RBP4.75□□□□□ -1.65
VCP-205ENST00000479300 SS18L2Q9UHA2 77 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 TNFRSF18Q9Y5U5 241 aa4.75□□□□□ -1.65
VCP-205ENST00000479300 TRBV6-1A0A0K0K1D8 114 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms