RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 C14orf178Q8N769 122 aaPredicted RBP4.73□□□□□ -1.65
USP48-208ENST00000479177 MRAPQ8TCY5 172 aa4.73□□□□□ -1.65
USP48-208ENST00000479177 FRZBQ92765 325 aa4.73□□□□□ -1.65
USP48-208ENST00000479177 SAMD10Q9BYL1 202 aa4.73□□□□□ -1.65
USP48-208ENST00000479177 C11orf68Q9H3H3 251 aaKnown RBP4.73□□□□□ -1.65
USP48-208ENST00000479177 LYRM9A8MSI8 78 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 A8MWV9 139 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 C1orf196B1AJZ1 125 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 RHODO00212 210 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 DEFB4AO15263 64 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 RS1O15537 224 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 CRYGDP07320 174 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 MGPP08493 103 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 RAB4AP20338 218 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 KIAA1644Q3SXP7 199 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 DEFB121Q5J5C9 76 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 FAM74A4Q5TZK3 123 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 FAM222AQ5U5X8 452 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 CFAP126Q5VTH2 177 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 POM121L12Q8N7R1 296 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 CELA1Q9UNI1 258 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 U3KQK5 164 aa4.72□□□□□ -1.65
USP48-208ENST00000479177 TRAV26-2A0A0B4J265 109 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 TRAV4A0A0B4J268 109 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 D6R8Y8 96 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 SMKR1H3BMG3 65 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BKO60814 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 GAGE7O76087 117 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 NCR2O95944 276 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BJP06899 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 GAGE12FP0CL80 117 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 GAGE12GP0CL81 117 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 GAGE12IP0CL82 117 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 SMIM17P0DL12 118 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BOP23527 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 SRIP30626 198 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BBP33778 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BDP58876 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BCP62807 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 ZNF56Q15929 161 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST2H2BEQ16778 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.71□□□□□ -1.66
USP48-208ENST00000479177 SUMO4Q6EEV6 95 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 ZFP2Q6ZN57 461 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BHQ93079 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 MRAP2Q96G30 205 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 C18orf15Q96N68 181 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BNQ99877 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 HIST1H2BMQ99879 126 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 B9D2Q9BPU9 175 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
USP48-208ENST00000479177 TGP01266 2768 aa4.71□□□□□ -1.66
USP48-208ENST00000479177 TRGV2A0A075B6R0 118 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 TEX48A0A1B0GUV7 120 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 GAS8-AS1O95177 125 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 NPYP01303 97 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 IGHV3-53P01767 116 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 PPBPP02775 128 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 GATA1P15976 413 aaPredicted RBP4.7□□□□□ -1.66
USP48-208ENST00000479177 RAB5BP61020 215 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 ORMDL3Q8N138 153 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 NRACQ8N912 160 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 OR4C5Q8NGB2 326 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 ZNF479Q96JC4 524 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 PRELID3AQ96N28 172 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 EDA2RQ9HAV5 297 aa4.7□□□□□ -1.66
USP48-208ENST00000479177 IGHV3-73A0A0B4J1V6 119 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 A0A0J9YWU9 116 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
USP48-208ENST00000479177 M0QY20 66 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 SPART-AS1P0CW21 52 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 DEFB130BP0DP73 79 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 DEFB130AP0DP74 79 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 CKS2P33552 79 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 DAD1P61803 113 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 DEFA6Q01524 100 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 C18orf32Q8TCD1 76 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 LAMTOR2Q9Y2Q5 125 aa4.69□□□□□ -1.66
USP48-208ENST00000479177 CIDEAO60543 219 aa4.68□□□□□ -1.66
USP48-208ENST00000479177 TNFRSF6BO95407 300 aa4.68□□□□□ -1.66
USP48-208ENST00000479177 Q0VG73 95 aa4.68□□□□□ -1.66
USP48-208ENST00000479177 IQCJQ1A5X6 159 aa4.68□□□□□ -1.66
USP48-208ENST00000479177 OR10J3Q5JRS4 329 aa4.68□□□□□ -1.66
USP48-208ENST00000479177 RPL39LQ96EH5 51 aaKnown RBP4.68□□□□□ -1.66
USP48-208ENST00000479177 TRBV6-5A0A0K0K1A5 114 aa4.67□□□□□ -1.66
USP48-208ENST00000479177 H7C1H1 209 aa4.67□□□□□ -1.66
USP48-208ENST00000479177 K7EQD1 137 aa4.67□□□□□ -1.66
USP48-208ENST00000479177 PPP1R17O96001 155 aa4.67□□□□□ -1.66
USP48-208ENST00000479177 P0DMU3 169 aa4.67□□□□□ -1.66
USP48-208ENST00000479177 FAM231AP0DMU4 169 aa4.67□□□□□ -1.66
USP48-208ENST00000479177 FAM231CP0DMU5 169 aa4.67□□□□□ -1.66
USP48-208ENST00000479177 RPL32P62910 135 aaKnown RBP4.67□□□□□ -1.66
USP48-208ENST00000479177 C12orf74Q32Q52 190 aa4.67□□□□□ -1.66
USP48-208ENST00000479177 COA6Q5JTJ3 125 aaKnown RBP4.67□□□□□ -1.66
USP48-208ENST00000479177 IGLV2-18A0A075B6J9 118 aa4.66□□□□□ -1.66
USP48-208ENST00000479177 TRGV4A0A0C4DH28 118 aa4.66□□□□□ -1.66
USP48-208ENST00000479177 TRBV10-1A0A0K0K1A3 114 aa4.66□□□□□ -1.66
USP48-208ENST00000479177 TRBV6-4A0A1B0GX49 114 aa4.66□□□□□ -1.66
USP48-208ENST00000479177 PRSS47A8MTI9 375 aa4.66□□□□□ -1.66
USP48-208ENST00000479177 SERF1AO75920 110 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms