RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 ANKRD39Q53RE8 183 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 MPV17L2Q567V2 206 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 TMEM97Q5BJF2 176 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 PIK3CD-AS1Q5SR53 167 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 C2orf91Q6ZV80 131 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 C9orf85Q96MD7 179 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 PEMTQ9UBM1 199 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 STARD9Q9P2P6 4700 aa6.2□□□□□ -1.42
VPS45-208ENST00000478999 TRBV6-5A0A0K0K1A5 114 aa6.19□□□□□ -1.42
VPS45-208ENST00000478999 LINC01619G3V211 115 aa6.19□□□□□ -1.42
VPS45-208ENST00000478999 CDKN1BP46527 198 aa6.19□□□□□ -1.42
VPS45-208ENST00000478999 TFPI2P48307 235 aa6.19□□□□□ -1.42
VPS45-208ENST00000478999 PAPPA-AS1Q5QFB9 102 aa6.19□□□□□ -1.42
VPS45-208ENST00000478999 RASL10AQ92737 203 aa6.19□□□□□ -1.42
VPS45-208ENST00000478999 EDA2RQ9HAV5 297 aa6.19□□□□□ -1.42
VPS45-208ENST00000478999 F6UB75 175 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 F8VRH5 84 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 H7C1H1 209 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 GATA1P15976 413 aaPredicted RBP6.18□□□□□ -1.42
VPS45-208ENST00000478999 SLURP1P55000 103 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 ZNF124Q15973 351 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 TAL2Q16559 108 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 C14orf178Q8N769 122 aaPredicted RBP6.18□□□□□ -1.42
VPS45-208ENST00000478999 C18orf15Q96N68 181 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 HHLA3Q9XRX5 114 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 KIF25-AS1Q9Y6Z4 181 aa6.18□□□□□ -1.42
VPS45-208ENST00000478999 IGHV1OR15-1A0A075B7D0 117 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 TRAV26-2A0A0B4J265 109 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 IGHV3-16A0A0C4DH30 117 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 VCYO14598 125 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 GAS8-AS1O95177 125 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 MGPP08493 103 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 CD7P09564 240 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 ZNF688P0C7X2 276 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 SYNJ2BPP57105 145 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 FHL3Q13643 280 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 ERASQ7Z444 233 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 PTH2Q96A98 100 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 TMEM141Q96I45 108 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 SCGB3A1Q96QR1 104 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 KIR2DL4Q99706 377 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 LINC00467Q9BRT7 94 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 DKK2Q9UBU2 259 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 CYSLTR1Q9Y271 337 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
VPS45-208ENST00000478999 IGKV3-7A0A075B6H7 116 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 TRAV25A0A0B4J276 109 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 TRBV27A0A0K0K1C4 114 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 H3BRM9 83 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 J3KRW8 73 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 TAX1BP3O14907 124 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 GNRH2O43555 120 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 NMUP48645 174 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 PTTG1IPP53801 180 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 LINC00315P59091 139 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 RHOHQ15669 191 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 ADAMTSL5Q6ZMM2 481 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 TIMM17AQ99595 171 aa6.16□□□□□ -1.42
VPS45-208ENST00000478999 TRAV12-3A0A0B4J271 114 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 NPSP0C0P6 89 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
VPS45-208ENST00000478999 FXYD7P58549 80 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 ZC2HC1BQ5TFG8 222 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 ZFAND6Q6FIF0 208 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 AMTNQ6UX39 209 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 C2orf66Q6UXQ4 117 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 Q6ZQT7 251 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 TRPT1Q86TN4 253 aaKnown RBP6.15□□□□□ -1.42
VPS45-208ENST00000478999 WFDC3Q8IUB2 231 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 DLX4Q92988 240 aaPredicted RBP6.15□□□□□ -1.42
VPS45-208ENST00000478999 CSTL1Q9H114 145 aa6.15□□□□□ -1.42
VPS45-208ENST00000478999 MRPL35Q9NZE8 188 aaKnown RBP6.15□□□□□ -1.42
VPS45-208ENST00000478999 CHTOPQ9Y3Y2 248 aaKnown RBP6.15□□□□□ -1.42
VPS45-208ENST00000478999 OR11H12B2RN74 326 aa6.14□□□□□ -1.43
VPS45-208ENST00000478999 DEFB1P60022 68 aa6.14□□□□□ -1.43
VPS45-208ENST00000478999 VAMP3Q15836 100 aa6.14□□□□□ -1.43
VPS45-208ENST00000478999 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
VPS45-208ENST00000478999 OR11H2Q8NH07 326 aa6.14□□□□□ -1.43
VPS45-208ENST00000478999 RPL39LQ96EH5 51 aaKnown RBP6.14□□□□□ -1.43
VPS45-208ENST00000478999 SPAG8Q99932 426 aaPredicted RBP6.14□□□□□ -1.43
VPS45-208ENST00000478999 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 CBY3A6NI87 242 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 A8MWV9 139 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 RHODO00212 210 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 CMC4P56277 68 aaPredicted RBP6.13□□□□□ -1.43
VPS45-208ENST00000478999 HERVK_113P61574 105 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 GTSCR1Q86UQ5 136 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 PCP2Q8IVA1 136 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 Q8N1Y9 231 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 OR4C5Q8NGB2 326 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 DYNLRB2Q8TF09 96 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 CHAC1Q9BUX1 264 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 TM2D2Q9BX73 214 aa6.13□□□□□ -1.43
VPS45-208ENST00000478999 HERC2O95714 4834 aa6.12□□□□□ -1.43
VPS45-208ENST00000478999 TRBV25-1A0A075B6N4 114 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms