RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 PRO1854Q9UHT4 67 aa10.61□□□□□ -0.71
CCDC78-210ENST00000478979 C11orf86A6NJI1 115 aa10.61□□□□□ -0.71
CCDC78-210ENST00000478979 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
CCDC78-210ENST00000478979 USP24Q9UPU5 2620 aa10.6□□□□□ -0.71
CCDC78-210ENST00000478979 GNRH2O43555 120 aa10.6□□□□□ -0.71
CCDC78-210ENST00000478979 C14orf178Q8N769 122 aaPredicted RBP10.6□□□□□ -0.71
CCDC78-210ENST00000478979 OR10J6PQ8NGY7 276 aa10.6□□□□□ -0.71
CCDC78-210ENST00000478979 NTN5Q8WTR8 489 aaPredicted RBP10.6□□□□□ -0.71
CCDC78-210ENST00000478979 IGHV4-4A0A075B6R2 117 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 HIST2H2BDQ6DRA6 164 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 RHPN1-AS1Q9BWJ2 59 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 RBAKDNA6NC62 111 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 CRYGDP07320 174 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 TSPEAR-AS2P59090 65 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 FAM159AQ6UWV7 190 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 DUX5Q96PT3 197 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 MSMBP08118 114 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 Q8N1Y9 231 aa10.59□□□□□ -0.71
CCDC78-210ENST00000478979 H7C2G1 150 aa10.58□□□□□ -0.72
CCDC78-210ENST00000478979 DUSP14O95147 198 aaKnown RBP10.58□□□□□ -0.72
CCDC78-210ENST00000478979 IGHV4-59P01825 116 aa10.58□□□□□ -0.72
CCDC78-210ENST00000478979 IGLV4-69A0A075B6H9 119 aa10.58□□□□□ -0.72
CCDC78-210ENST00000478979 HERVK_113P61574 105 aa10.58□□□□□ -0.72
CCDC78-210ENST00000478979 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
CCDC78-210ENST00000478979 U3KQE9 123 aa10.58□□□□□ -0.72
CCDC78-210ENST00000478979 NF1P21359 2839 aa10.58□□□□□ -0.72
CCDC78-210ENST00000478979 C9orf47Q6ZRZ4 202 aa10.57□□□□□ -0.72
CCDC78-210ENST00000478979 RNF223E7ERA6 249 aa10.57□□□□□ -0.72
CCDC78-210ENST00000478979 C9orf139Q6ZV77 190 aa10.57□□□□□ -0.72
CCDC78-210ENST00000478979 PHLDA3Q9Y5J5 127 aa10.57□□□□□ -0.72
CCDC78-210ENST00000478979 MUC4Q99102 2169 aa10.56□□□□□ -0.72
CCDC78-210ENST00000478979 EIF4EBP3O60516 100 aaPredicted RBP10.56□□□□□ -0.72
CCDC78-210ENST00000478979 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
CCDC78-210ENST00000478979 A4D1N5 150 aa10.56□□□□□ -0.72
CCDC78-210ENST00000478979 M0QXV9 152 aa10.56□□□□□ -0.72
CCDC78-210ENST00000478979 C19orf54Q5BKX5 351 aa10.56□□□□□ -0.72
CCDC78-210ENST00000478979 Q6Q795 121 aa10.56□□□□□ -0.72
CCDC78-210ENST00000478979 ZFAND2AQ8N6M9 145 aa10.56□□□□□ -0.72
CCDC78-210ENST00000478979 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
CCDC78-210ENST00000478979 TEX49A0A1B0GTD5 131 aa10.55□□□□□ -0.72
CCDC78-210ENST00000478979 NDUFA4O00483 81 aa10.55□□□□□ -0.72
CCDC78-210ENST00000478979 TSHBP01222 138 aa10.55□□□□□ -0.72
CCDC78-210ENST00000478979 IGHG2P01859 326 aa10.55□□□□□ -0.72
CCDC78-210ENST00000478979 JPT2Q9H910 190 aa10.55□□□□□ -0.72
CCDC78-210ENST00000478979 A6NDX4 124 aa10.55□□□□□ -0.72
CCDC78-210ENST00000478979 IGHV3-33P01772 117 aa10.55□□□□□ -0.72
CCDC78-210ENST00000478979 ELANEP08246 267 aa10.55□□□□□ -0.72
CCDC78-210ENST00000478979 TRAV8-4A0A0B4J246 113 aa10.54□□□□□ -0.72
CCDC78-210ENST00000478979 BRI3O95415 125 aa10.54□□□□□ -0.72
CCDC78-210ENST00000478979 TMEM170BQ5T4T1 132 aa10.54□□□□□ -0.72
CCDC78-210ENST00000478979 TRAV12-2A0A075B6T6 113 aa10.54□□□□□ -0.72
CCDC78-210ENST00000478979 DEFB112Q30KQ8 113 aa10.54□□□□□ -0.72
CCDC78-210ENST00000478979 DPH3P1Q9H4G8 78 aa10.54□□□□□ -0.72
CCDC78-210ENST00000478979 TRAV12-3A0A0B4J271 114 aa10.53□□□□□ -0.72
CCDC78-210ENST00000478979 TP53TG1Q9Y2A0 90 aa10.53□□□□□ -0.72
CCDC78-210ENST00000478979 ZNF469Q96JG9 3925 aaPredicted RBP10.53□□□□□ -0.72
CCDC78-210ENST00000478979 LINC01620Q4KN68 170 aa10.53□□□□□ -0.72
CCDC78-210ENST00000478979 PAPPA-AS1Q5QFB9 102 aa10.53□□□□□ -0.72
CCDC78-210ENST00000478979 TMEM263Q8WUH6 116 aaKnown RBP10.53□□□□□ -0.72
CCDC78-210ENST00000478979 AMELXQ99217 191 aa10.53□□□□□ -0.72
CCDC78-210ENST00000478979 A0A087WWL8 130 aa10.52□□□□□ -0.72
CCDC78-210ENST00000478979 TRAV21A0A0B4J279 112 aa10.52□□□□□ -0.72
CCDC78-210ENST00000478979 HTN1P15515 57 aa10.52□□□□□ -0.72
CCDC78-210ENST00000478979 MEIG1Q5JSS6 88 aa10.52□□□□□ -0.72
CCDC78-210ENST00000478979 CHD6Q8TD26 2715 aa10.52□□□□□ -0.72
CCDC78-210ENST00000478979 NACAE9PAV3 2078 aa10.52□□□□□ -0.73
CCDC78-210ENST00000478979 Q1RN00 199 aa10.52□□□□□ -0.73
CCDC78-210ENST00000478979 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
CCDC78-210ENST00000478979 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.73
CCDC78-210ENST00000478979 J3QQQ9 107 aa10.52□□□□□ -0.73
CCDC78-210ENST00000478979 PMVKQ15126 192 aa10.52□□□□□ -0.73
CCDC78-210ENST00000478979 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.73
CCDC78-210ENST00000478979 F5H697 171 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 SOCS3O14543 225 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 P0DMU3 169 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 FAM231AP0DMU4 169 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 FAM231CP0DMU5 169 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
CCDC78-210ENST00000478979 ATXN8Q156A1 80 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 ZNRF2Q8NHG8 242 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
CCDC78-210ENST00000478979 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 B4DSR2 109 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 LGALS3P17931 250 aaKnown RBP10.51□□□□□ -0.73
CCDC78-210ENST00000478979 USMG5Q96IX5 58 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 TNFRSF18Q9Y5U5 241 aa10.51□□□□□ -0.73
CCDC78-210ENST00000478979 IGIPA6NJ69 53 aa10.5□□□□□ -0.73
CCDC78-210ENST00000478979 ACANP16112 2415 aa10.5□□□□□ -0.73
CCDC78-210ENST00000478979 OVOL1O14753 267 aa10.5□□□□□ -0.73
CCDC78-210ENST00000478979 RPL13AP40429 203 aaKnown RBP10.5□□□□□ -0.73
CCDC78-210ENST00000478979 C3orf56Q8N813 242 aa10.5□□□□□ -0.73
CCDC78-210ENST00000478979 PRRC2AP48634 2157 aaKnown RBP10.5□□□□□ -0.73
CCDC78-210ENST00000478979 NBPF19A0A087WUL8 3843 aa10.49□□□□□ -0.73
CCDC78-210ENST00000478979 H3BMM0 161 aa10.49□□□□□ -0.73
CCDC78-210ENST00000478979 SYNJ2BPP57105 145 aa10.49□□□□□ -0.73
CCDC78-210ENST00000478979 KLK9Q2XQG4 91 aa10.49□□□□□ -0.73
CCDC78-210ENST00000478979 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms