RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 ZZEF1O43149 2961 aa3.18□□□□□ -1.9
GPNMB-210ENST00000478451 NOTCH2Q04721 2471 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 SPENQ96T58 3664 aaKnown RBP3.17□□□□□ -1.9
GPNMB-210ENST00000478451 EP300Q09472 2414 aaPredicted RBP3.17□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV3OR16-8A0A075B7F1 116 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 A0A087WW49 117 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 A0A087WZ39 114 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 TRAV26-2A0A0B4J265 109 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV3-66A0A0C4DH42 116 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 TEX48A0A1B0GUV7 120 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 TMEM89A2RUT3 159 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 C11orf86A6NJI1 115 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 ZNF815PA8K554 130 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 TMEM238C9JI98 176 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 G3V318 75 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 K7EMT4 169 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 NXPH4O95158 308 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV1-69P01742 117 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 GATA1P15976 413 aaPredicted RBP3.17□□□□□ -1.9
GPNMB-210ENST00000478451 RIPPLY3P57055 190 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 HERV-K104P63124 156 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 SRSF9Q13242 221 aaKnown RBP eCLIP3.17□□□□□ -1.9
GPNMB-210ENST00000478451 PMVKQ15126 192 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 ZFAND2AQ8N6M9 145 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 POM121L12Q8N7R1 296 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 BAALCQ8WXS3 180 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 RASL10AQ92737 203 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 FAM19A4Q96LR4 140 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 TIMM17AQ99595 171 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
GPNMB-210ENST00000478451 PRADC1Q9BSG0 188 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 DAZ1Q9NQZ3 744 aaKnown RBP3.17□□□□□ -1.9
GPNMB-210ENST00000478451 SPANXB1Q9NS25 103 aaPredicted RBP3.17□□□□□ -1.9
GPNMB-210ENST00000478451 MRPL16Q9NX20 251 aaKnown RBP3.17□□□□□ -1.9
GPNMB-210ENST00000478451 ABCA1O95477 2261 aa3.17□□□□□ -1.9
GPNMB-210ENST00000478451 TPRP12270 2363 aaKnown RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 HRNRQ86YZ3 2850 aaPredicted RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 TACC2O95359 2948 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV3OR16-13A0A075B7E8 117 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV3-74A0A0B4J1X5 117 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 TRBV6-5A0A0K0K1A5 114 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 H3BMG7 143 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 K7ERJ3 54 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 SOCS3O14543 225 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 DUSP14O95147 198 aaKnown RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 APOMO95445 188 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 IGHG2P01859 326 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 LGALS1P09382 135 aaKnown RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 RNASE4P34096 147 aaKnown RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 XGP55808 180 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 LMO4P61968 165 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 SNRPD3P62318 126 aaKnown RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 RHOHQ15669 191 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 C14orf178Q8N769 122 aaPredicted RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 TP53TG1Q9Y2A0 90 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 LOC400499M0QZD8 3231 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 MAP1BP46821 2468 aaKnown RBP3.16□□□□□ -1.9
GPNMB-210ENST00000478451 LRBAP50851 2863 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 BOD1L1Q8NFC6 3051 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 WNK2Q9Y3S1 2297 aa3.16□□□□□ -1.9
GPNMB-210ENST00000478451 IGHV3-49A0A0A0MS15 119 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.15□□□□□ -1.91
GPNMB-210ENST00000478451 LOC107984156A0A0G2JMH3 177 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 TRBV27A0A0K0K1C4 114 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 A0A0U1RRA0 63 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 KLLNB2CW77 178 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 TMEM262E9PQX1 116 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 LGALS9O00182 355 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 PRB4P10163 310 aaPredicted RBP3.15□□□□□ -1.91
GPNMB-210ENST00000478451 UBE2D1P51668 147 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 CRYBA4P53673 196 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 NSUN5P1Q3KNT7 163 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 TCTEX1D4Q5JR98 221 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 CLEC2AQ6UVW9 174 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 ZFP2Q6ZN57 461 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 Q6ZVQ6 151 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 ARL17AQ8IVW1 177 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 PLEKHB2Q96CS7 222 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 RPL39LQ96EH5 51 aaKnown RBP3.15□□□□□ -1.91
GPNMB-210ENST00000478451 C2orf48Q96LS8 159 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 RHPN1-AS1Q9BWJ2 59 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 BPESC1Q9GZL8 116 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 TSSC4Q9Y5U2 329 aaPredicted RBP3.15□□□□□ -1.91
GPNMB-210ENST00000478451 CFAP47Q6ZTR5 3102 aa3.15□□□□□ -1.91
GPNMB-210ENST00000478451 TLN1Q9Y490 2541 aaKnown RBP3.15□□□□□ -1.91
GPNMB-210ENST00000478451 DMXL1Q9Y485 3027 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 MUC4Q99102 2169 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 SPTBN2O15020 2390 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 A6NDX4 124 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 SDHAF1A6NFY7 115 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 A8MWV9 139 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 H3BUX3 64 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 M0QXV9 152 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 LEPROTO15243 131 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 CD7P09564 240 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 RNASE3P12724 160 aaKnown RBP3.14□□□□□ -1.91
GPNMB-210ENST00000478451 COX6B1P14854 86 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 AZU1P20160 251 aa3.14□□□□□ -1.91
GPNMB-210ENST00000478451 PSMB2P49721 201 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms