RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SNAI2O43623 268 aa9.51□□□□□ -0.89
SMARCE1-209ENST00000478349 EIF5AL1Q6IS14 154 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-209ENST00000478349 DEFB104AQ8WTQ1 72 aa9.51□□□□□ -0.89
SMARCE1-209ENST00000478349 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-209ENST00000478349 MIAQ16674 131 aa9.5□□□□□ -0.89
SMARCE1-209ENST00000478349 C15orf54Q8N8G6 183 aa9.5□□□□□ -0.89
SMARCE1-209ENST00000478349 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
SMARCE1-209ENST00000478349 DAZAP1Q96EP5 407 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-209ENST00000478349 MLST8Q9BVC4 326 aa9.5□□□□□ -0.89
SMARCE1-209ENST00000478349 SSBP4Q9BWG4 385 aaPredicted RBP9.5□□□□□ -0.89
SMARCE1-209ENST00000478349 SRRM2Q9UQ35 2752 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-209ENST00000478349 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
SMARCE1-209ENST00000478349 SMLR1H3BR10 107 aa9.49□□□□□ -0.89
SMARCE1-209ENST00000478349 RAB5CP51148 216 aa9.49□□□□□ -0.89
SMARCE1-209ENST00000478349 RPS20P60866 119 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-209ENST00000478349 RPL19P84098 196 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-209ENST00000478349 TMUB2Q71RG4 321 aa9.49□□□□□ -0.89
SMARCE1-209ENST00000478349 TRBV25-1A0A075B6N4 114 aa9.48□□□□□ -0.89
SMARCE1-209ENST00000478349 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-209ENST00000478349 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
SMARCE1-209ENST00000478349 SMIM12Q96EX1 92 aa9.48□□□□□ -0.89
SMARCE1-209ENST00000478349 CHAC1Q9BUX1 264 aa9.48□□□□□ -0.89
SMARCE1-209ENST00000478349 IFNA1P01562 189 aa9.47□□□□□ -0.89
SMARCE1-209ENST00000478349 MPV17L2Q567V2 206 aa9.47□□□□□ -0.89
SMARCE1-209ENST00000478349 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
SMARCE1-209ENST00000478349 GNG13Q9P2W3 67 aa9.47□□□□□ -0.89
SMARCE1-209ENST00000478349 VAX2Q9UIW0 290 aa9.47□□□□□ -0.89
SMARCE1-209ENST00000478349 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
SMARCE1-209ENST00000478349 CACNG7P62955 275 aa9.46□□□□□ -0.9
SMARCE1-209ENST00000478349 C11orf52Q96A22 123 aa9.46□□□□□ -0.9
SMARCE1-209ENST00000478349 DNAJC30Q96LL9 226 aa9.46□□□□□ -0.9
SMARCE1-209ENST00000478349 DERL1Q9BUN8 251 aa9.46□□□□□ -0.9
SMARCE1-209ENST00000478349 TPPP3Q9BW30 176 aa9.46□□□□□ -0.9
SMARCE1-209ENST00000478349 FLG2Q5D862 2391 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-209ENST00000478349 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
SMARCE1-209ENST00000478349 IGHV1-24A0A0C4DH33 117 aa9.45□□□□□ -0.9
SMARCE1-209ENST00000478349 PDE6DO43924 150 aa9.45□□□□□ -0.9
SMARCE1-209ENST00000478349 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
SMARCE1-209ENST00000478349 FER1L6-AS1Q8NA97 138 aa9.45□□□□□ -0.9
SMARCE1-209ENST00000478349 MUC21A0A0G2JKD1 596 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 MUC21A0A140T8X8 626 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 F2Z2F3 143 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 IGLV2-8P01709 118 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 MGPP08493 103 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 TRGC1P0CF51 173 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 GNG4P50150 75 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 SSTP61278 116 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 LINC01620Q4KN68 170 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 CENPWQ5EE01 88 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 OR2D3Q8NGH3 330 aa9.44□□□□□ -0.9
SMARCE1-209ENST00000478349 VPS13BQ7Z7G8 4022 aa9.43□□□□□ -0.9
SMARCE1-209ENST00000478349 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-209ENST00000478349 USP17L23D6RBM5 183 aa9.43□□□□□ -0.9
SMARCE1-209ENST00000478349 P01737 135 aa9.43□□□□□ -0.9
SMARCE1-209ENST00000478349 IQCJQ1A5X6 159 aa9.43□□□□□ -0.9
SMARCE1-209ENST00000478349 TAGLN2P37802 199 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 RBX1P62877 108 aa9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 CCL20P78556 96 aa9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 PRR34Q9NV39 138 aa9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 FAT1Q14517 4588 aa9.42□□□□□ -0.9
SMARCE1-209ENST00000478349 IGLC6P0CF74 106 aa9.41□□□□□ -0.9
SMARCE1-209ENST00000478349 GAGE6Q13070 117 aa9.41□□□□□ -0.9
SMARCE1-209ENST00000478349 LINC00269Q8N2A0 174 aa9.41□□□□□ -0.9
SMARCE1-209ENST00000478349 HERC1Q15751 4861 aa9.41□□□□□ -0.9
SMARCE1-209ENST00000478349 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
SMARCE1-209ENST00000478349 M0QY20 66 aa9.4□□□□□ -0.9
SMARCE1-209ENST00000478349 RASL11AQ6T310 242 aa9.4□□□□□ -0.9
SMARCE1-209ENST00000478349 TMEM243Q9BU79 118 aa9.4□□□□□ -0.9
SMARCE1-209ENST00000478349 DPH3P1Q9H4G8 78 aa9.4□□□□□ -0.9
SMARCE1-209ENST00000478349 UBE2L6O14933 153 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 GZMBP10144 247 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 REG3AQ06141 175 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 WDR73Q6P4I2 378 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 CLPSL2Q6UWE3 100 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 NTM-AS1Q6ZSK4 140 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 PGLYRP4Q96LB8 373 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
SMARCE1-209ENST00000478349 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-209ENST00000478349 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
SMARCE1-209ENST00000478349 OXTP01178 125 aa9.38□□□□□ -0.91
SMARCE1-209ENST00000478349 BCL2P10415 239 aa9.38□□□□□ -0.91
SMARCE1-209ENST00000478349 SULT1A2P50226 295 aa9.38□□□□□ -0.91
SMARCE1-209ENST00000478349 NIT2Q9NQR4 276 aa9.38□□□□□ -0.91
SMARCE1-209ENST00000478349 AP5S1Q9NUS5 200 aa9.38□□□□□ -0.91
SMARCE1-209ENST00000478349 A0A1B0GUV1 79 aa9.37□□□□□ -0.91
SMARCE1-209ENST00000478349 PRSS1P07477 247 aa9.37□□□□□ -0.91
SMARCE1-209ENST00000478349 NKX2-5P52952 324 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-209ENST00000478349 RPL37AP61513 92 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-209ENST00000478349 COTL1Q14019 142 aa9.37□□□□□ -0.91
SMARCE1-209ENST00000478349 SMIM15Q7Z3B0 74 aa9.37□□□□□ -0.91
SMARCE1-209ENST00000478349 C9orf163Q8N9P6 203 aa9.37□□□□□ -0.91
SMARCE1-209ENST00000478349 AMTP48728 403 aa9.36□□□□□ -0.91
SMARCE1-209ENST00000478349 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms