RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 TTTY13Q9BZ97 58 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 CYSLTR1Q9Y271 337 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 SETD2Q9BYW2 2564 aaPredicted RBP8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 PRM2P04554 102 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 HSD52Q0P140 79 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 FHL3Q13643 280 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 MORN3Q6PF18 240 aaPredicted RBP8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 TP53TG1Q9Y2A0 90 aa8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 ZNF256Q9Y2P7 627 aaPredicted RBP8.09□□□□□ -1.11
HLA-DMB-260ENST00000477537 WNK1Q9H4A3 2382 aa8.09□□□□□ -1.12
HLA-DMB-260ENST00000477537 JMJD1CQ15652 2540 aa8.08□□□□□ -1.12
HLA-DMB-260ENST00000477537 RNASE1P07998 156 aaKnown RBP8.08□□□□□ -1.12
HLA-DMB-260ENST00000477537 SEC11AP67812 179 aa8.08□□□□□ -1.12
HLA-DMB-260ENST00000477537 TRPT1Q86TN4 253 aaKnown RBP8.08□□□□□ -1.12
HLA-DMB-260ENST00000477537 TRAV25A0A0B4J276 109 aa8.07□□□□□ -1.12
HLA-DMB-260ENST00000477537 TRBV27A0A0K0K1C4 114 aa8.07□□□□□ -1.12
HLA-DMB-260ENST00000477537 PRSS29PA6NIE9 313 aa8.07□□□□□ -1.12
HLA-DMB-260ENST00000477537 LINC01006Q8NI28 216 aa8.07□□□□□ -1.12
HLA-DMB-260ENST00000477537 C16orf95Q9H693 158 aa8.07□□□□□ -1.12
HLA-DMB-260ENST00000477537 RPL39P62891 51 aaKnown RBP8.07□□□□□ -1.12
HLA-DMB-260ENST00000477537 LINC01587Q99440 93 aa8.07□□□□□ -1.12
HLA-DMB-260ENST00000477537 TSSC4Q9Y5U2 329 aaPredicted RBP8.07□□□□□ -1.12
HLA-DMB-260ENST00000477537 IGHV3-73A0A0B4J1V6 119 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 LINC01549A6NIU2 74 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 INAFM1C9JVW0 142 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 TSHBP01222 138 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 INSP01308 110 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 RIPPLY3P57055 190 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 ZNF415Q09FC8 603 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 SCGB2A2Q13296 93 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 ODF3L2Q3SX64 289 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 JMJD8Q96S16 334 aa8.06□□□□□ -1.12
HLA-DMB-260ENST00000477537 TRAV8-6A0A0B4J262 113 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 IGIPA6NJ69 53 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 M0R2P5 195 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 VAMP3Q15836 100 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 MAPKAPK5-AS1Q8N8E1 139 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 HIGD1BQ9P298 99 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 TRBV25-1A0A075B6N4 114 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 A6NDN8 102 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 PTTG1IPP53801 180 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 ZNF418Q8TF45 676 aaPredicted RBP8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 TMEM141Q96I45 108 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 CHAC1Q9BUX1 264 aa8.05□□□□□ -1.12
HLA-DMB-260ENST00000477537 CCL25O15444 150 aa8.04□□□□□ -1.12
HLA-DMB-260ENST00000477537 PROK1P58294 105 aa8.04□□□□□ -1.12
HLA-DMB-260ENST00000477537 RHOHQ15669 191 aa8.04□□□□□ -1.12
HLA-DMB-260ENST00000477537 STHQ8IWL8 128 aa8.04□□□□□ -1.12
HLA-DMB-260ENST00000477537 TIMM17AQ99595 171 aa8.04□□□□□ -1.12
HLA-DMB-260ENST00000477537 LINC00467Q9BRT7 94 aa8.04□□□□□ -1.12
HLA-DMB-260ENST00000477537 A8MWV9 139 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 OR11H12B2RN74 326 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 I3L3M4 83 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 PMVKQ15126 192 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 NSUN5P1Q3KNT7 163 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 CLUHP3Q96NS8 147 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 XCL2Q9UBD3 114 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 NACAE9PAV3 2078 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 P0DMU3 169 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 FAM231AP0DMU4 169 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 FAM231CP0DMU5 169 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 UFSP1Q6NVU6 142 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 C11orf72Q8NBR9 251 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 CST9LQ9H4G1 147 aa8.03□□□□□ -1.12
HLA-DMB-260ENST00000477537 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 H3BRM9 83 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 GCSHP23434 173 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 EMP1P54849 157 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 HILS1P60008 231 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 OR11H2Q8NH07 326 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 PTH2Q96A98 100 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 EDA2RQ9HAV5 297 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 MRPL16Q9NX20 251 aaKnown RBP8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 CBY1Q9Y3M2 126 aa8.02□□□□□ -1.13
HLA-DMB-260ENST00000477537 C11orf86A6NJI1 115 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 SAP30O75446 220 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 PIK3CD-AS1Q5SR53 167 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 CFAP126Q5VTH2 177 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 SPXQ9BT56 116 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 IGHV3OR16-12A0A075B7B8 117 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 E9PLD3 99 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 AZU1P20160 251 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 AMMECR1LQ6DCA0 310 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 Q6ZSN1 163 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 C20orf203Q8NBC4 194 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 PRADC1Q9BSG0 188 aa8.01□□□□□ -1.13
HLA-DMB-260ENST00000477537 MYMXA0A1B0GTQ4 84 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 K7EP13 123 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 NDUFA7O95182 113 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 FXYD2P54710 66 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 PAPPA-AS1Q5QFB9 102 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 C1orf158Q8N1D5 194 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 RAB37Q96AX2 223 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 OPRPNQ99935 248 aaPredicted RBP8□□□□□ -1.13
HLA-DMB-260ENST00000477537 TNFRSF18Q9Y5U5 241 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 C2CD3Q4AC94 2353 aa8□□□□□ -1.13
HLA-DMB-260ENST00000477537 C9orf118A6NHY6 69 aa7.99□□□□□ -1.13
HLA-DMB-260ENST00000477537 BEAN1Q3B7T3 259 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms