RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 BAGE2Q86Y30 109 aa7.38□□□□□ -1.23
HDLBP-236ENST00000477477 FAM213BQ8TBF2 198 aa7.38□□□□□ -1.23
HDLBP-236ENST00000477477 SFT2D1Q8WV19 159 aa7.38□□□□□ -1.23
HDLBP-236ENST00000477477 MBD3L1Q8WWY6 194 aa7.38□□□□□ -1.23
HDLBP-236ENST00000477477 CHCHD5Q9BSY4 110 aa7.38□□□□□ -1.23
HDLBP-236ENST00000477477 SSBP4Q9BWG4 385 aaPredicted RBP7.38□□□□□ -1.23
HDLBP-236ENST00000477477 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
HDLBP-236ENST00000477477 FAT3Q8TDW7 4589 aa7.38□□□□□ -1.23
HDLBP-236ENST00000477477 MUC21A0A0G2JKD1 596 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 MUC21A0A140T8X8 626 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 A0A1B0GV50 99 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 USP17L23D6RBM5 183 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 SMLR1H3BR10 107 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 HLA-DQA1P01909 254 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 ZNF345Q14585 488 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 KCNRGQ8N5I3 272 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-236ENST00000477477 VAX2Q9UIW0 290 aa7.37□□□□□ -1.23
HDLBP-236ENST00000477477 UMAD1C9J7I0 102 aa7.36□□□□□ -1.23
HDLBP-236ENST00000477477 MIAQ16674 131 aa7.36□□□□□ -1.23
HDLBP-236ENST00000477477 TMEM97Q5BJF2 176 aa7.36□□□□□ -1.23
HDLBP-236ENST00000477477 NTM-AS1Q6ZSK4 140 aa7.36□□□□□ -1.23
HDLBP-236ENST00000477477 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
HDLBP-236ENST00000477477 KIF25-AS1Q9Y6Z4 181 aa7.36□□□□□ -1.23
HDLBP-236ENST00000477477 F5H697 171 aa7.35□□□□□ -1.23
HDLBP-236ENST00000477477 AP1S3Q96PC3 154 aa7.35□□□□□ -1.23
HDLBP-236ENST00000477477 OXTP01178 125 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 PRSS1P07477 247 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 SMIM17P0DL12 118 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 RPL35P42766 123 aaKnown RBP7.34□□□□□ -1.23
HDLBP-236ENST00000477477 SSTP61278 116 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 RBX1P62877 108 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 KRTAP26-1Q6PEX3 210 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 CLPSL2Q6UWE3 100 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 TMUB2Q71RG4 321 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 DERL1Q9BUN8 251 aa7.34□□□□□ -1.23
HDLBP-236ENST00000477477 TRBV25-1A0A075B6N4 114 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 BCL2L11O43521 198 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 H2AFB1P0C5Y9 115 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 RPL37AP61513 92 aaKnown RBP7.33□□□□□ -1.24
HDLBP-236ENST00000477477 GAGE6Q13070 117 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 IQCJQ1A5X6 159 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 SERTAD4-AS1Q5TG53 156 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 DGAT2L7PQ6IED9 249 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 LINC00269Q8N2A0 174 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 C11orf52Q96A22 123 aa7.33□□□□□ -1.24
HDLBP-236ENST00000477477 IGHV1-24A0A0C4DH33 117 aa7.32□□□□□ -1.24
HDLBP-236ENST00000477477 A0A0D9SG52 128 aa7.32□□□□□ -1.24
HDLBP-236ENST00000477477 KANTRA0A1W2PQU2 76 aa7.32□□□□□ -1.24
HDLBP-236ENST00000477477 HMSDA8MTL9 139 aa7.32□□□□□ -1.24
HDLBP-236ENST00000477477 C9orf163Q8N9P6 203 aa7.32□□□□□ -1.24
HDLBP-236ENST00000477477 M0QY20 66 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 MGPP08493 103 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 IGLC6P0CF74 106 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 GZMBP10144 247 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 EIF5AP63241 154 aaKnown RBP7.31□□□□□ -1.24
HDLBP-236ENST00000477477 CTAG1AP78358 180 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 CENPWQ5EE01 88 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 SLC51BQ86UW2 128 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 FER1L6-AS1Q8NA97 138 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 TPPP3Q9BW30 176 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 MANBALQ9NQG1 85 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 GNG13Q9P2W3 67 aa7.31□□□□□ -1.24
HDLBP-236ENST00000477477 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.31□□□□□ -1.24
HDLBP-236ENST00000477477 C19orf71A6NCJ1 209 aa7.3□□□□□ -1.24
HDLBP-236ENST00000477477 H7C1H1 209 aa7.3□□□□□ -1.24
HDLBP-236ENST00000477477 PANO1I0J062 215 aa7.3□□□□□ -1.24
HDLBP-236ENST00000477477 HNRNPA3P51991 378 aaKnown RBP7.3□□□□□ -1.24
HDLBP-236ENST00000477477 RPS20P60866 119 aaKnown RBP7.3□□□□□ -1.24
HDLBP-236ENST00000477477 CCL20P78556 96 aa7.3□□□□□ -1.24
HDLBP-236ENST00000477477 REG3AQ06141 175 aa7.3□□□□□ -1.24
HDLBP-236ENST00000477477 SUMO4Q6EEV6 95 aa7.3□□□□□ -1.24
HDLBP-236ENST00000477477 C20orf203Q8NBC4 194 aa7.3□□□□□ -1.24
HDLBP-236ENST00000477477 OR2D3Q8NGH3 330 aa7.3□□□□□ -1.24
HDLBP-236ENST00000477477 DAZAP1Q96EP5 407 aaKnown RBP7.3□□□□□ -1.24
HDLBP-236ENST00000477477 PKHD1L1Q86WI1 4243 aa7.29□□□□□ -1.24
HDLBP-236ENST00000477477 CACNG7P62955 275 aa7.29□□□□□ -1.24
HDLBP-236ENST00000477477 SDIM1Q6ZPB5 146 aa7.29□□□□□ -1.24
HDLBP-236ENST00000477477 CLRN3Q8NCR9 226 aa7.29□□□□□ -1.24
HDLBP-236ENST00000477477 IGLV4-60A0A075B6I1 120 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 IGLV10-54A0A075B6I4 117 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 TRAV1-1A0A0B4J248 108 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 P01737 135 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 NKX2-5P52952 324 aaPredicted RBP7.28□□□□□ -1.24
HDLBP-236ENST00000477477 CNBPP62633 177 aaKnown RBP7.28□□□□□ -1.24
HDLBP-236ENST00000477477 RASL11AQ6T310 242 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 AKAP14Q86UN6 197 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 SLC7A5P1Q8MH63 180 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 SMIM12Q96EX1 92 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 TMEM243Q9BU79 118 aa7.28□□□□□ -1.24
HDLBP-236ENST00000477477 A0A1B0GUV1 79 aa7.27□□□□□ -1.25
HDLBP-236ENST00000477477 hDV102S1A0JD36 115 aa7.27□□□□□ -1.25
HDLBP-236ENST00000477477 XKRY2A2RUG3 117 aa7.27□□□□□ -1.25
HDLBP-236ENST00000477477 RAB19A4D1S5 217 aa7.27□□□□□ -1.25
HDLBP-236ENST00000477477 F2Z2F3 143 aa7.27□□□□□ -1.25
HDLBP-236ENST00000477477 TRGC1P0CF51 173 aa7.27□□□□□ -1.25
HDLBP-236ENST00000477477 GNG4P50150 75 aa7.27□□□□□ -1.25
HDLBP-236ENST00000477477 CIRBPQ14011 172 aaKnown RBP7.27□□□□□ -1.25
HDLBP-236ENST00000477477 PGLYRP4Q96LB8 373 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms