RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 MGPP08493 103 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 EVI2AP22794 236 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TIRAPP58753 221 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 ESRGQ1W209 222 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 NUP35Q8NFH5 326 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 ATP6V0E2Q8NHE4 81 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 FRZBQ92765 325 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 UPK3BQ9BT76 320 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 MRPS16Q9Y3D3 137 aaKnown RBP9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 LINC00588Q9Y4M8 146 aa9.14□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TRBV7-3A0A075B6L6 115 aa9.13□□□□□ -0.95
HLA-DPA1-246ENST00000476642 SNRPEP62304 92 aaKnown RBP9.13□□□□□ -0.95
HLA-DPA1-246ENST00000476642 LYPD5Q6UWN5 251 aa9.13□□□□□ -0.95
HLA-DPA1-246ENST00000476642 Q6ZSN1 163 aa9.13□□□□□ -0.95
HLA-DPA1-246ENST00000476642 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
HLA-DPA1-246ENST00000476642 CTDSP1Q9GZU7 261 aa9.13□□□□□ -0.95
HLA-DPA1-246ENST00000476642 A0A087WWC5 75 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 LOC100131303A0A0U1RQF7 123 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 GAGE1Q13065 139 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 GAGE4Q13068 117 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 GAGE5Q13069 117 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TMEM191AQ9H0A3 160 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TRAV8-6A0A0B4J262 113 aa9.11□□□□□ -0.95
HLA-DPA1-246ENST00000476642 LINC00315P59091 139 aa9.11□□□□□ -0.95
HLA-DPA1-246ENST00000476642 RASL11AQ6T310 242 aa9.11□□□□□ -0.95
HLA-DPA1-246ENST00000476642 ZNRF2Q8NHG8 242 aa9.11□□□□□ -0.95
HLA-DPA1-246ENST00000476642 RPS10P5Q9NQ39 176 aa9.11□□□□□ -0.95
HLA-DPA1-246ENST00000476642 NIT2Q9NQR4 276 aa9.11□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TNFRSF18Q9Y5U5 241 aa9.11□□□□□ -0.95
HLA-DPA1-246ENST00000476642 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
HLA-DPA1-246ENST00000476642 RAB5AP20339 215 aa9.1□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TMEM97Q5BJF2 176 aa9.1□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TTC32Q5I0X7 151 aa9.1□□□□□ -0.95
HLA-DPA1-246ENST00000476642 KCNIP4Q6PIL6 250 aa9.1□□□□□ -0.95
HLA-DPA1-246ENST00000476642 ATP5L2Q7Z4Y8 100 aa9.1□□□□□ -0.95
HLA-DPA1-246ENST00000476642 IMMP2LQ96T52 175 aa9.1□□□□□ -0.95
HLA-DPA1-246ENST00000476642 Q9H8V8 135 aa9.1□□□□□ -0.95
HLA-DPA1-246ENST00000476642 K7EP13 123 aa9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 M0QY20 66 aa9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 SIVA1O15304 175 aa9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 FABP9Q0Z7S8 132 aa9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 LELP1Q5T871 98 aa9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 SUMO4Q6EEV6 95 aa9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 DAZ4Q86SG3 579 aaKnown RBP9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 NEXN-AS1Q8NBZ9 246 aa9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 DAZ3Q9NR90 486 aaKnown RBP9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TMEM242Q9NWH2 141 aa9.09□□□□□ -0.95
HLA-DPA1-246ENST00000476642 TRAV9-2A0A087WT02 112 aa9.08□□□□□ -0.96
HLA-DPA1-246ENST00000476642 C7orf77A4D0Y5 90 aa9.08□□□□□ -0.96
HLA-DPA1-246ENST00000476642 LINC00587B1AMM8 73 aa9.08□□□□□ -0.96
HLA-DPA1-246ENST00000476642 PPP1R17O96001 155 aa9.08□□□□□ -0.96
HLA-DPA1-246ENST00000476642 UBE2D3P61077 147 aa9.08□□□□□ -0.96
HLA-DPA1-246ENST00000476642 UBE2D2P62837 147 aa9.08□□□□□ -0.96
HLA-DPA1-246ENST00000476642 HBBP68871 147 aa9.08□□□□□ -0.96
HLA-DPA1-246ENST00000476642 OR10J3Q5JRS4 329 aa9.08□□□□□ -0.96
HLA-DPA1-246ENST00000476642 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
HLA-DPA1-246ENST00000476642 S100A2P29034 98 aa9.07□□□□□ -0.96
HLA-DPA1-246ENST00000476642 MRAP2Q96G30 205 aa9.07□□□□□ -0.96
HLA-DPA1-246ENST00000476642 BTF3L4Q96K17 158 aa9.07□□□□□ -0.96
HLA-DPA1-246ENST00000476642 BTF3P20290 206 aaKnown RBP9.06□□□□□ -0.96
HLA-DPA1-246ENST00000476642 CAMPP49913 170 aa9.06□□□□□ -0.96
HLA-DPA1-246ENST00000476642 MRPL54Q6P161 138 aaKnown RBP9.06□□□□□ -0.96
HLA-DPA1-246ENST00000476642 IGLV2-18A0A075B6J9 118 aa9.05□□□□□ -0.96
HLA-DPA1-246ENST00000476642 NBDYA0A0U1RRE5 68 aa9.05□□□□□ -0.96
HLA-DPA1-246ENST00000476642 RAB4AP20338 218 aa9.05□□□□□ -0.96
HLA-DPA1-246ENST00000476642 PKIAP61925 76 aa9.05□□□□□ -0.96
HLA-DPA1-246ENST00000476642 C10orf126Q8N4M7 172 aa9.05□□□□□ -0.96
HLA-DPA1-246ENST00000476642 GATD1Q8NB37 220 aa9.05□□□□□ -0.96
HLA-DPA1-246ENST00000476642 Q9UF83 564 aa9.05□□□□□ -0.96
HLA-DPA1-246ENST00000476642 IGHV3-38A0A0C4DH36 116 aa9.04□□□□□ -0.96
HLA-DPA1-246ENST00000476642 A0A1B0GXF2 115 aa9.04□□□□□ -0.96
HLA-DPA1-246ENST00000476642 FAM104BQ5XKR9 115 aa9.04□□□□□ -0.96
HLA-DPA1-246ENST00000476642 AMN1Q8IY45 258 aa9.04□□□□□ -0.96
HLA-DPA1-246ENST00000476642 KRTAP17-1Q9BYP8 105 aa9.04□□□□□ -0.96
HLA-DPA1-246ENST00000476642 TRBV6-8A0A0A6YYG3 113 aa9.03□□□□□ -0.96
HLA-DPA1-246ENST00000476642 PPBPP02775 128 aa9.03□□□□□ -0.96
HLA-DPA1-246ENST00000476642 DNAH10OSP0CZ25 163 aa9.03□□□□□ -0.96
HLA-DPA1-246ENST00000476642 LBHQ53QV2 105 aaPredicted RBP9.03□□□□□ -0.96
HLA-DPA1-246ENST00000476642 Q6ZR54 194 aa9.03□□□□□ -0.96
HLA-DPA1-246ENST00000476642 RNF185Q96GF1 192 aa9.03□□□□□ -0.96
HLA-DPA1-246ENST00000476642 URGCP-MRPS24S4R325 110 aa9.03□□□□□ -0.96
HLA-DPA1-246ENST00000476642 TRBV25-1A0A075B6N4 114 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TRAV26-2A0A0B4J265 109 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 TRBV6-5A0A0K0K1A5 114 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 M0R2N4 97 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 COX19Q49B96 90 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 WFDC10BQ8IUB3 73 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 CHCHD7Q9BUK0 85 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 VPS13DQ5THJ4 4388 aa9.02□□□□□ -0.97
HLA-DPA1-246ENST00000476642 NCR2O95944 276 aa9.01□□□□□ -0.97
HLA-DPA1-246ENST00000476642 CKS2P33552 79 aa9.01□□□□□ -0.97
HLA-DPA1-246ENST00000476642 COTL1Q14019 142 aa9.01□□□□□ -0.97
HLA-DPA1-246ENST00000476642 A0A087WX48 190 aa9□□□□□ -0.97
HLA-DPA1-246ENST00000476642 IGHV1-24A0A0C4DH33 117 aa9□□□□□ -0.97
HLA-DPA1-246ENST00000476642 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms