RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 ETDBQ3ZM63 59 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 C9orf153Q5TBE3 101 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 TRGV9Q99603 122 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 IMUPQ9GZP8 106 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 LAMTOR3Q9UHA4 124 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 NBEAL2Q6ZNJ1 2754 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 STARD9Q9P2P6 4700 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 IGKV1D-37A0A075B6S9 117 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 A0A0J9YWU9 116 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 LCE6AA0A183 80 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 FAM236DA0A1B0GTK5 79 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 ZNF688P0C7X2 276 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 FAM236CP0DP71 79 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 CRYGAP11844 174 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 SNRPD3P62318 126 aaKnown RBP8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 WFDC2Q14508 124 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 SPANXN5Q5MJ07 72 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 TMEM14EPQ6UXP3 125 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 C10orf126Q8N4M7 172 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 THAP8Q8NA92 274 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 PRO0461Q9UI25 63 aa8.44□□□□□ -1.06
HLA-DOB-208ENST00000475235 DYNC2H1Q8NCM8 4307 aaKnown RBP8.43□□□□□ -1.06
HLA-DOB-208ENST00000475235 COX8AP10176 69 aa8.43□□□□□ -1.06
HLA-DOB-208ENST00000475235 TMEM136Q6ZRR5 245 aa8.43□□□□□ -1.06
HLA-DOB-208ENST00000475235 SACSQ9NZJ4 4579 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 PRSS46E5RG02 174 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 H3BP45 60 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 H3BTX0 84 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 P0DMU3 169 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 FAM231AP0DMU4 169 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 FAM231CP0DMU5 169 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 GATA2P23769 480 aaPredicted RBP8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 LYZP61626 148 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 NUP35Q8NFH5 326 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 DPH3Q96FX2 82 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 PSENENQ9NZ42 101 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 KLF12Q9Y4X4 402 aa8.42□□□□□ -1.06
HLA-DOB-208ENST00000475235 RYR2Q92736 4967 aa8.41□□□□□ -1.06
HLA-DOB-208ENST00000475235 E9PLD3 99 aa8.41□□□□□ -1.06
HLA-DOB-208ENST00000475235 J3QQQ9 107 aa8.41□□□□□ -1.06
HLA-DOB-208ENST00000475235 SSSCA1O60232 199 aa8.41□□□□□ -1.06
HLA-DOB-208ENST00000475235 BCL2P10415 239 aa8.41□□□□□ -1.06
HLA-DOB-208ENST00000475235 UBE2G1P62253 170 aa8.41□□□□□ -1.06
HLA-DOB-208ENST00000475235 PMAIP1Q13794 54 aa8.41□□□□□ -1.06
HLA-DOB-208ENST00000475235 TRBV20-1A0A075B6N2 111 aa8.4□□□□□ -1.06
HLA-DOB-208ENST00000475235 IGKV1OR2-108A0A075B7D4 117 aa8.4□□□□□ -1.06
HLA-DOB-208ENST00000475235 NUPR2A6NF83 97 aa8.4□□□□□ -1.06
HLA-DOB-208ENST00000475235 FAM213BQ8TBF2 198 aa8.4□□□□□ -1.06
HLA-DOB-208ENST00000475235 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 OXTP01178 125 aa8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 TAS2R45P59539 299 aa8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 C11orf68Q9H3H3 251 aaKnown RBP8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 CSMD3Q7Z407 3707 aa8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 GAGE2AQ6NT46 116 aa8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 LINC00479Q96M42 142 aa8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 GNB1LQ9BYB4 327 aa8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
HLA-DOB-208ENST00000475235 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 PMS2P5A8MQ11 134 aa8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 NDUFB4O95168 129 aa8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 PFN2P35080 140 aa8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 RPL23P62829 140 aaKnown RBP8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 TEPPQ6URK8 271 aa8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 C2orf91Q6ZV80 131 aa8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 EXOC3-AS1Q8N2X6 119 aa8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 TMEM147Q9BVK8 224 aa8.38□□□□□ -1.07
HLA-DOB-208ENST00000475235 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
HLA-DOB-208ENST00000475235 DEDDO75618 318 aa8.37□□□□□ -1.07
HLA-DOB-208ENST00000475235 CEMP1Q6PRD7 247 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOB-208ENST00000475235 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
HLA-DOB-208ENST00000475235 TEN1Q86WV5 123 aa8.37□□□□□ -1.07
HLA-DOB-208ENST00000475235 OR10G8Q8NGN5 311 aa8.37□□□□□ -1.07
HLA-DOB-208ENST00000475235 KLK5Q9Y337 293 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOB-208ENST00000475235 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 H3BMM0 161 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 GIG44P09565 113 aaPredicted RBP8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 MIFP14174 115 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 ANXA2RQ3ZCQ2 193 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 SERTAD4-AS1Q5TG53 156 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 LYRM7Q5U5X0 104 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 C11orf45Q8TAV5 145 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 SLC25A22Q9H936 323 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
HLA-DOB-208ENST00000475235 SOCS3O14543 225 aa8.35□□□□□ -1.07
HLA-DOB-208ENST00000475235 HLA-DMBP28068 263 aa8.35□□□□□ -1.07
HLA-DOB-208ENST00000475235 ANKRD29Q8N6D5 301 aa8.35□□□□□ -1.07
HLA-DOB-208ENST00000475235 SMIM7Q9BQ49 75 aa8.35□□□□□ -1.07
HLA-DOB-208ENST00000475235 PLECQ15149 4684 aaKnown RBP8.35□□□□□ -1.07
HLA-DOB-208ENST00000475235 A0A0U1RQV1 116 aa8.34□□□□□ -1.07
HLA-DOB-208ENST00000475235 EBLN2Q6P2I7 272 aa8.34□□□□□ -1.07
HLA-DOB-208ENST00000475235 Q8NAQ8 132 aa8.34□□□□□ -1.07
HLA-DOB-208ENST00000475235 CSNK1G2-AS1Q8NCQ2 148 aa8.34□□□□□ -1.07
HLA-DOB-208ENST00000475235 PHLDA1Q8WV24 401 aaPredicted RBP8.34□□□□□ -1.07
HLA-DOB-208ENST00000475235 MRPL18Q9H0U6 180 aaKnown RBP8.34□□□□□ -1.07
HLA-DOB-208ENST00000475235 LYSTQ99698 3801 aa8.34□□□□□ -1.07
HLA-DOB-208ENST00000475235 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
HLA-DOB-208ENST00000475235 FAM236AA0A1B0GUQ0 79 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms